Rattus norvegicus (rat): 311426
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Entry
311426 CDS
T01003
Symbol
Siglec1
Name
(RefSeq) sialoadhesin precursor
KO
K06548
sialoadhesin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
311426 (Siglec1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rno04090
]
311426 (Siglec1)
04091 Lectins [BR:
rno04091
]
311426 (Siglec1)
CD molecules [BR:
rno04090
]
Proteins
311426 (Siglec1)
Lectins [BR:
rno04091
]
I-type lectins (Siglecs)
311426 (Siglec1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
C2-set_2
Ig_5
C1-set
Izumo-Ig
Ig_CD22
ICAM1_3_5_D2
FAM53
Motif
Other DBs
NCBI-GeneID:
311426
NCBI-ProteinID:
NP_001101247
RGD:
1311953
Ensembl:
ENSRNOG00000021243
UniProt:
D3ZVM6
A6HQC1
LinkDB
All DBs
Position
3:complement(138740171..138759966)
Genome browser
AA seq
1609 aa
AA seq
DB search
MCALLSLLLLASVFTPGQTTWGVSSPKDVQGLTGSCLLIPCIFSFPADVSVPNGITAIWY
YDYSGKRQVVIHSGDPKLVDERFRGRAELTGNMDHKVCNLLLKDLKLEDSGTYNFRFEIS
DGNRWSDVRGTTVTVTKDPSPPTITIPHELREGVEVNVNCSTPYLCLQEKQVSLHWQGQD
PTRSVISNFQSLEPTGVYHQTTLHMAPSWQDHRRTLRCQLSLATHSSQKEVYLQVQHAPK
GVEILLSSSGRNILPGNLVTLTCRVNSSYPAVSSVDWVKDGVNLTAKGHVLQLSSATWND
SGVYTCQATNNVGSLASPPLSLHVFMAEVKINPAGPILENETVTLLCSTPKEAPQELRYS
WYKNNILLEDAHAPTLHLPAVTRADTGFYFCEVQNTQGSERSGPVSVVVRYPPLTPDLTT
FLETQAGLVGIFHCSVISEPLATVVLSHGGLTLASSSGENDFNPRFSISSAPNSVRLEIR
DLQPADSGEYTCSATNSLGKSMSSLDFHANDPPRKLTFTARLDLDTSGDGDGRRGILLCQ
VDSDPPAQLQLLHKGHVVATSLPSMCGSCSRRMKVSRASNSLQVEIQKPVLEDEGMYLCE
ASNTLGNSSVSASFNAKATVVVITPSDTLLEGTEASLTCNVTQEVAVSPANFSWFRNGVL
WTQGPLETVRLQPLARTDAAVYACRLLTDDGAQLSAPVVLSVQYAPDPPKLSALLDVGQG
HMAVFICTVDSYPLAHLSLFRGERLLATSLEPQRLSHGRIQAKATANSLQLEVRELGLED
SGNYHCEATNVLGSANSSLFFQVRGAWVQVSPSPELREGQAVVLSCQVPTGVPEGTSYRW
FQDGRPLQESTSSILRIAAISLRQAGAYHCQAQAPDTAAASLAAPVSLHVSYTPRHVTLS
ALLSTGPGRYGHLVCSAQSDPPALLRLFHQNRLVASTLQGPEELASSNPRLHVAVSSNEL
RLEIQFTELEDGGTYTCEATNTLGQASATADFDAQAVRVAVWPNATVQEGQQVNLSCLAW
STHQDSLSYTWYKGGQQLLGVRSISLPSVTVSDATSYRCGVGLPGHTPHLSRPVTLDVLY
APRSLQLTYLLESQGRRLALVLCTVDSRPPAQLTLSHGGQLLASSTEASVPNTLRLELQD
PKPSDEGLYSCSAQSPLGKVNTSLALRLEGVRVRMNPSATVPEGEPVTVTCEDPAALSPA
LYAWFHNGHWLQEGPASSLQFPVTTQAHAGAYFCQVHDTQGTRSSRPASLQILYAPRDAV
LSSFRDSRTRHMVVIQCTVDSEPPAELVLSRNSKVLAASRELHSSAPGISHVQAARNALR
LQVQDTTFGDGNTYVCTARNTLGSISTTHKLLRETDIHVTAEPGLDVPEGTALNLSCHLP
GGSQPVGNSSFTWFWNRHLLHSAPVPTLSFTPVVRAQAGSYHCRAELSTGVTTSPPVMLR
VLYPPKTPTLTVFVEPQGGHQGILDCRVDSEPLASLTLQLGSQLVASNQPHSAPTQPHIR
VTAPPNALRLDIEELGPNNQGEYVCTASNALGSASASAYFGTRALQQLQLFQRLLWVLGF
LAGFLGLLLGLGACYSWRKKNSSKLNVNENSAEMTTQKDNIQEETVAAV
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccctgctctccttgctcctgctggcctcggtcttcacaccaggccagaccacg
tggggtgtctccagtcccaaggatgtgcagggcttgactggatcttgcctgctcattccc
tgcatcttcagcttccctgctgatgtatcagtgcctaatggcatcacagccatctggtac
tatgactactcgggcaaacggcaggtggtaatccactcaggggaccccaagctggtggat
gagcgcttcaggggcagagctgaactgacagggaacatggatcacaaggtgtgcaacctg
ttgctcaaagacctgaagcttgaagactcaggcacctacaacttccgctttgagatcagt
gatggcaaccgctggtctgatgtcagaggcaccacagtcactgtgacaaaggatcccagt
ccccccactattaccatcccacatgagctgcgtgaaggtgtggaggtgaacgtcaactgt
tccacaccctacctgtgcctgcaggagaagcaggtcagcctgcattggcaaggccaggac
cccacccgctccgtcatctccaacttccagagcctcgagcccactggcgtctaccaccag
acgaccctacatatggccccatcctggcaggaccacagacggaccctgcgctgccagctg
tcattggccacgcacagtagtcagaaagaggtttatctacaagtgcagcatgcccccaaa
ggtgtggagatcctccttagctcctcaggaaggaacatccttccagggaacctggtcacg
ctcacctgccgggtgaatagcagctatcctgccgtcagttctgtggattgggtcaaggat
ggagtgaacctcacagccaaggggcatgtgctccagctatcctcagcaacctggaatgat
tctggggtctacacctgtcaagcaacaaataatgtgggctctctggcatcacccccactc
agcctccacgtttttatggctgaagtcaagataaacccagcagggcccatcttggaaaat
gagacagtgacactcctctgtagcacccccaaggaggcaccccaggagctccgctacagc
tggtacaagaacaacattcttctggaagacgcccatgccccaaccttgcacctgcctgca
gtcaccagggctgatactggcttctatttctgtgaggtgcagaacacccagggcagtgag
cgctccggtccagtgagtgtggtggtcagatatccacctcttactccagacctgaccacc
ttcttggagacacaggctggacttgtgggcatcttccattgctctgtgatcagcgagccc
ctggctactgtggtactgtcacacggaggtctcacattggcctccagctctggagaaaat
gacttcaacccccgattcagcatttcctctgcccccaactccgtgcgcctagaaatccga
gacttgcagccagcggacagcggggagtacacatgctcagccaccaactcccttggaaaa
tcaatgtccagcctagacttccatgcaaatgatcccccaagaaagctcacattcactgcc
aggctggatttggatacctctggagacggggatggacggcgtggcatcctcttgtgccaa
gtagacagtgatcccccagcccagctacagcttctccacaaaggtcatgttgtggccact
tctctgccatcaatgtgtgggagctgctctcggcgcatgaaagtcagcagagcctccaac
tcactgcaggtggagatccagaagccggtactagaggatgagggcatgtacctgtgtgag
gctagcaacacactgggcaactcctctgtctcagcctctttcaatgctaaggctactgtc
gtggtcatcacaccgtcagatacactgcttgaaggcacagaagccagcctaacttgtaac
gtgacccaggaggttgccgtcagccctgccaacttttcttggttccggaatggagtgctg
tggacccagggaccactggagactgtgaggctgcagcctctggccaggactgatgctgcc
gtctatgcctgccgcctcctcactgacgatggggcccagctctcggctcctgtggtccta
agtgtgcagtatgccccagaccctccaaagctgtcagccctcctggatgtgggtcagggc
cacatggctgtgttcatctgcactgtggacagctatcccctggctcacctgtctctattc
cgtggggagcgcctcctggccaccagcttggaaccccagcgtctatcccatggtagaatc
caggccaaggccacagccaactccctgcagctagaggtccgggaactaggccttgaagac
tctggaaactaccactgtgaagccacaaatgttcttggatcagccaacagttcactcttc
ttccaggtcagaggagcctgggtccaggtttcgccatcacctgagctccgagagggccag
gctgtggtcctgagctgccaggtgcccacaggggtgcctgagggaacctcataccgctgg
tttcaggatggccgccccctccaggagtcaacctcatctatattgcgcattgcagccata
agtctgaggcaagctggtgcctaccattgccaagctcaggctccagacacagctgcagcc
agcctggctgcccctgtcagcctccatgtgtcctataccccacgtcacgtgacactcagc
gccctgctgagcacgggccctgggcgatacggccacctggtgtgcagtgcacaaagtgac
cctccagctctgctgcgactgttccaccagaatcgcctcgtggcctctaccctacaaggc
ccggaggaattggcaagcagtaatccccggctgcatgtggctgtgagctccaatgagttg
cgcctggagatccaattcacagagctggaggatggtgggacctacacatgtgaagccacc
aacacactgggccaggcatctgctacagctgacttcgatgcccaggctgtgcgtgtggcc
gtgtggcccaatgccactgtgcaagaggggcagcaggtgaacctcagctgcttggcgtgg
agcacccaccaggactcactcagctacacatggtacaagggcggccaacaactgcttggt
gtcagatccatctccctgcccagcgttacagtttcggatgctacctcctaccgctgcggt
gtggggctccctggccacacaccccatctctccagacctgtgaccctggatgtcctctac
gctccccgaagcctgcagctgacctacctcctggagagccagggccggcggctggccctg
gtactgtgtactgtggatagtcgcccacctgcccagctaactctcagccacggtggccag
ctcctagcctcctccactgaagcttccgtccccaacaccctgcgcctagagcttcaggac
ccgaagcccagtgatgaggggctctacagctgctctgcccagagcccactgggcaaggtc
aacacatccctggcgcttcggctggaaggtgtacgagtgaggatgaatccctctgctact
gtacccgagggggagcctgtcacagtgacctgcgaggaccctgctgccctctcacctgca
ctctatgcctggtttcacaatggccattggcttcaggagggaccagcttcgtcactccag
ttcccagtgacgacacaggctcatgctggcgcttacttttgccaggtgcatgatactcag
ggcacgcggagctccagacctgccagcctgcaaattctctatgccccccgggatgctgtc
ctgtcttccttccgagactccaggaccaggcacatggtcgtgattcagtgcaccgtggac
agtgaaccacctgctgagctggttctctcccgaaacagcaaggtgctagctgccagccgt
gagcttcacagctcagcacccgggataagccacgtccaggcagcccggaatgctcttcga
ctacaggtgcaagacacgacttttggtgatggcaacacttacgtttgcacagcccggaat
acactgggctccatcagtaccacccacaagcttctgagggagactgatatacatgtgaca
gctgagccaggcttggatgtgccagagggcacagctctaaacctgagctgccacctcccc
ggtggctcccagcctgtgggcaactcttccttcacgtggttctggaatcgccatctccta
cattcagctcctgtgcccacactctccttcacccctgtggtccgggctcaggctgggtcg
taccactgcagggctgagctctccactggggttactacctcacctcccgtcatgctccgt
gtcctctatcctcccaagactcccactctcacagtgtttgtggaacctcagggtggccat
cagggcatcctcgactgtcgagtggacagtgagcccctggccagtctcaccctccagctg
ggcagtcaactagtagcttctaaccaaccgcacagcgctcccacccagccccacatccga
gtcactgctcctcccaatgccttgagactggacatagaggagctcggacctaacaatcaa
ggggagtatgtgtgcacagcctccaacgctctgggctctgcctcagcctcagcctacttt
gggaccagagccctgcagcagctgcagctgttccagaggctgctctgggtcctgggattt
ctggcaggcttcctgggcctgctgctgggcctaggggcctgttacagctggagaaagaag
aattctagcaaactgaatgtgaatgagaattcagcagagatgaccactcagaaagataat
atccaggaggagacggttgctgctgtctga
DBGET
integrated database retrieval system