KEGG   Rattus norvegicus (rat): 311796
Entry
311796            CDS       T01003                                 
Symbol
Nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    311796 (Nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    311796 (Nelfb)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     311796 (Nelfb)
SSDB
Motif
Pfam: COBRA1 BatA
Other DBs
NCBI-GeneID: 311796
NCBI-ProteinID: NP_001101287
RGD: 1307832
Ensembl: ENSRNOG00000009377
LinkDB
Position
3:complement(28409045..28425564)
AA seq 631 aa
MATLEAAGERGLGGPRGTVERTSGAPSASATAPAERGGDGVHSRAAVGASAMFAGLQDLG
VANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFHQSVFDEL
RDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLK
LVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKESALFSTELSVLHNFFS
PSPKTRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLD
VSDICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPF
AINTLSLSTIRHLQELVSQETLPRDSPDLLLLLRLLALGQGAWDLIDSQVFKEPKMEAEL
ITKFLPMLMSFVVDDYTFNVDQKLPAEEKAPVTYPNTLPESFTKFLQEQRMACEVGLYYV
LHITKQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTGSLALLADEFALEDFCSSLFDGF
FLTASPRKDNVHRHVLRLLLHLHARVAPSKLEALQKALEPTGQSGEAVKELYSQLGEKLE
QLDHRKPSPPQAAETPALELPLPSVPAPAAL
NT seq 1896 nt   +upstreamnt  +downstreamnt
ctggccacactggaggcggcgggcgaacggggcttgggtggtcctcgtggcaccgtggaa
aggacgtctggggctccgtcagcgtccgctacggctccagcagagcgcggcggggatggg
gtacacagccgagcggccgtcggagcctcggccatgtttgcggggctccaggacctgggc
gtggccaatggcgaggacctgaaagagaccctaaccaactgcaccgagcctctcaaggcc
attgagcaatttcagacagagaatggcgtgttgctgccttccctgcagtcggccctgccc
ttcttggatctacacgggacaccgcggctggagttccatcagtcagtgtttgatgagcta
cgcgacaaactgctggaacgagtgtcagctattgcctctgagggaaaggcagaggagagg
tacaagaagctggaagaccttctggaaaagagcttttctctggtcaagatgccatcccta
cagccagtggtgatgtgtgttatgaaacacttgcccaaggttcctgagaagaagctgaag
ctggtgatggctgacaaggagttgtaccgggcatgtgctgtggaagtgaagaggcagatc
tggcaagataaccaggctctctttggtgatgaagtctcaccactgttgaagcagtatatc
ctagagaaggagagtgcactgttcagcacggagctctctgtcctgcacaacttcttcagc
ccttcccccaagaccaggcgtcagggagaggtggtgcagaagctgacacagatggtaggg
aagaacgtgaagctgtatgacatggtgctgcagttcttgcgcacactgttccttcggacc
aggaatgtgcactactgcacgctacgagccgagctgctgatgtctttgcatgacctggat
gtcagtgatatctgcaccgtggatccctgccataagttcacctggtgcctggatgcctgc
atccgtgagcggtttgtggacagcaaacgagcccgagagctgcagggattccttgatggt
gtgaagaagggccaggaacaagttttgggggacttgtctatgatcctgtgtgaccctttt
gccatcaacactctgtccctgagcaccatcaggcacttgcaggagctggttagccaggag
accctgcccagggacagtcccgacctcctcctcctccttaggctgctggcactgggccaa
ggtgcatgggacttaatagacagccaggtcttcaaggagcccaagatggaggcagagctc
atcaccaagttcctgccgatgctcatgtccttcgtggtggatgactacactttcaacgta
gatcagaagcttccagctgaggagaaagccccagtcacatatcccaacacgcttcctgaa
agcttcaccaagtttctgcaggagcagcgcatggcttgtgaggtgggactgtactatgtt
ctacacatcaccaagcagagaaacaagaatgctctcctgcgcctgctgcctggtcttgtg
gaaacctttggtgacctggccttcagtgacatcttcctccacctactcactgggagtctg
gcgctgttggctgatgaatttgccctggaggacttttgcagcagcctctttgatggcttc
ttcctcactgcctctcccaggaaggacaatgtacaccgccatgtgctgaggcttctcctt
cacttgcatgcgagagtggccccttccaagctggaggcgttgcagaaggcgctggagccc
acgggccagagcggggaggctgtgaaggagctctactcccagcttggtgagaagttggag
cagttggaccatcggaagcccagtcctccccaagctgcagagacccccgcactggagctg
cctcttcccagtgtgcctgctccagccgcactgtga

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