KEGG   Rattus norvegicus (rat): 312115
Entry
312115            CDS       T01003                                 
Symbol
Col28a1
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
  KO
K23619  collagen type XXVIII alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    312115 (Col28a1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    312115 (Col28a1)
Peptidases and inhibitors [BR:rno01002]
 Peptidase inhibitors
  Family I2: Kunitz - BPTI family
   312115 (Col28a1)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Kunitz_BPTI VWA_3 VWA_4
Other DBs
NCBI-GeneID: 312115
NCBI-ProteinID: XP_038964532
RGD: 1564680
Ensembl: ENSRNOG00000033618
LinkDB
Position
4:complement(37036303..37189435)
AA seq 1141 aa
MRKRDVAFCLLLLPAFMTQAVYGQRKKGPKPNILARKNDFQDAICFIDVVFILDSSESSK
IVLFDNQKDFVDSLSEKLFQLTPGHSLRYDIKLAALQFSSSVQIDPPFSSWKDLRTFKQR
VKSLNLIGQGTFSYYAISNATRLLKKEGRKDGVKVALLMTDGIDHPKSPDVQSISEDARI
SGISFITVGLSTVVNEAKLRLISGDSSNEPVLLLSDPTLVDKIRGRLDVLFERKCEHKIC
ECEKGDPGDPGPPGTHGNPGIKGERGPKGNPGDAQKGETGERGPVGIPGYKGDKGERGEC
GKPGMKGDKGPAGPYGPKGPRGIQGIGGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIG
QQGVKGERGQEGRTGAPGPIGIGEPGQPGPRGPEGAPGERGLPGEGVPGPKGEKGSEGPT
GPQGLQGLSIKGDKGDLGPVGPQGPAGIPGIGSQGEQGIQGPTGPPGPQGPPGQGSPGPK
GEVGRMGPTGPRGPMGIGIQGPKGEPGTVGLPGQPGVPGEDGASGKKGEAGLPGTRGPEG
MPGKGQPGPKGDEGKKGSKGNQGQRGFPGPEGPKGEPGIMGPFGMPGASIPGPSGPKGDR
GGPGMPGLKGEPGLSVRGPKGAQGPRGPVGAPGLKGDGYPGVAGPRGLPGPPGPMGLRGV
GDTGAKGEPGVRGPPGPSGPRGIGIQGPKGDTGQKGLPGPPGPPGYGSQGIKGEQGPQGF
PGSKGTVGLGLPGQKGEHGERGDVGRKGEKGDIGEPGSPGKQGLQGPKGDLGLTKEEIIK
LIIEICGCGPKCKETPLELVFVIDSSESVGPENFQIIQNFVKTLADRVALDLGTARIGII
NYSHKVEKVASLKQFSSKDDFKLVVDNMQYLGEGTYTATALQAANDMFKEARPGVKKVAL
VITDGQTDSRDKRKLADVVKDANDSKVEIFVIGVVKKDDPNFEIFHKEMNLIATDSEHVY
QFDDFFTLQDTLKQKLSKKICEDFDSYLIQVFGSSSFQPEFGVSEREVNISTPKPTKEIS
KLFNISRGQNEETEPSVLTEAGNLAIPTPPEATNTLKPLLSSPERVEARTPNPNLLQSEK
SLYKDPRCEEALKPGNCGDYVVRWYYDKQVNSCARFWFSGCNGSGNRFHSEKECQETCIK
Q
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgaggaaaagagacgttgccttctgtctcctgcttttgccagcttttatgactcaagca
gtatatggacaaagaaagaaaggaccaaagccaaacatacttgcaaggaaaaatgacttt
caggatgccatttgcttcatagatgttgtctttatcttggacagctctgaaagctctaaa
attgtgctctttgataatcagaaagattttgtggacagcttgagcgagaagcttttccag
ttgactcctggtcactcattaagatatgacatcaagctggcagcccttcagtttagcagt
tcggtacagattgatccaccattttcctcttggaaggatctccggacatttaagcagcgg
gtcaagtctttgaatttaattgggcaaggtaccttttcttactatgccatctccaatgcc
acaaggctacttaaaaaagaaggacgtaaagatggcgtgaaagtggctctgctgatgact
gatggcattgatcatcccaagagtccagatgtccaaagtatttctgaagatgctagaatt
tcgggaatatcatttatcactgttggactttccactgtggtcaatgaagccaaacttcgt
ttgatatctggggactcttccaatgaacctgttctactattaagtgatccaacacttgta
gacaaaattcggggacgcctggatgtcttatttgaaaggaagtgtgaacacaagatctgt
gaatgtgagaagggagatccaggcgacccagggcctcctggtacccatggaaaccctggt
atcaaaggtgagcgaggaccaaaaggaaatccgggtgatgctcagaaaggagaaactgga
gaaagagggcctgtgggaatccctgggtacaagggtgacaagggtgaacgaggagaatgt
gggaaaccaggaatgaaaggtgacaaaggacctgcagggccatatggaccaaaaggacca
agaggaattcagggcattggtggacctccaggggatccaggcccaaagggatttcaagga
aataagggtgagccaggtcctcctggtccttatggtcctccaggagcccctggtattgga
cagcaaggtgttaagggtgaaaggggccaggaaggaaggacaggagctccaggaccgatt
ggaattggtgaacccggacagccaggtccccgtggtcctgaaggagcaccaggagagagg
ggcctaccaggagaaggagttccaggaccgaagggggaaaagggttctgaaggaccaact
ggcccacaaggattacaaggcctgtcaatcaaaggggataagggggatttgggacctgtg
ggaccccagggaccagcgggtattcctggcattggaagtcaaggcgagcaggggatccaa
ggtccaactggtccacctggtccacaaggacccccaggacaaggctcacctggtcctaag
ggagaagtaggccggatgggacccacagggcctagaggaccaatgggaattggaatacag
ggtccaaagggggagccaggcacagtagggctcccaggacagccgggagtcccaggggaa
gatggggcctctggaaagaagggagaagctgggcttccaggaacaagaggcccagaagga
atgcctggaaaaggacagcctggccccaagggtgatgaaggaaagaaagggagcaaagga
aatcaaggacagagggggtttccaggacccgaagggccaaagggagaaccgggcattatg
ggcccctttggaatgcctggagcatcaattcctggaccatctggaccaaagggagaccga
ggaggacctggaatgcctggtctcaagggagaacctggactttctgttcgaggaccaaag
ggtgcccagggtccccggggaccagtgggtgctccaggactcaaaggtgatggctatcct
ggtgtggctggacctcgaggattgccaggaccccctggaccaatgggcttacgtggtgtg
ggagacactggagcgaagggagagccaggggtcagaggccctccaggtccctctggtcct
cggggcataggaatccaaggaccgaagggtgatactgggcaaaagggcctgcctggccct
cctgggccccctggctatggatcacaaggaattaaaggggaacaaggacctcaaggtttc
ccaggatcaaagggcacagtgggcctcggcctccctggtcagaagggagaacatggagaa
cggggcgatgtggggaggaaaggcgaaaagggagacatcggagagcctggatctccagga
aaacaggggttacaaggaccgaaaggagacctgggactcacgaaagaagaaattatcaaa
cttatcattgaaatatgtggttgtgggcccaaatgcaaagagactccactggagttggtg
tttgtgatagacagttcggaaagtgtgggaccagagaactttcagatcatccaaaatttt
gtgaagactctggctgaccgggtggccttggatcttggcacagcccgcataggaataatc
aactatagccacaaggtggagaaggtagctagcctgaagcagttctccagcaaggatgat
ttcaagctggtggtggacaacatgcagtatctgggggaagggacctacacagccactgct
cttcaagcagccaatgacatgttcaaggaggcaaggccaggggtaaagaaggtagccttg
gtgatcactgatggacagacagattcccgagataaaaggaaactggcagatgtggtgaag
gatgccaatgactccaaagtggaaatatttgtgattggggtggtaaagaaggatgacccc
aactttgaaatttttcacaaagaaatgaatctcattgctactgactcagaacacgtgtat
cagtttgatgacttctttaccctgcaagatactctgaagcaaaagctgtctaaaaaaatt
tgtgaagattttgactcctatctcatacaagtttttggatcatcatcttttcaacctgaa
tttggggtgtcagagcgagaggtcaacatatccactccaaagcctacaaaagaaatttct
aagttgtttaatatctctagaggtcaaaatgaagagactgaaccttctgtgttgactgag
gctggtaacttggccatcccaaccccacctgaggccaccaatacacttaagccattgctc
agcagccctgaaagagtggaagcaaggactccaaatcctaatttgttgcagtcagaaaaa
tctctgtacaaagatccaagatgcgaggaggccctgaagcctggaaactgtggcgactat
gtggttcgctggtattatgacaaacaggtcaactcttgtgctcgcttttggttcagtggc
tgcaatggctcaggaaacagattccacagtgaaaaggaatgtcaagaaacctgcattaaa
caatga

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