Rattus norvegicus (rat): 312320
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Entry
312320 CDS
T01003
Symbol
Igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
312320 (Igf2bp3)
03041 Spliceosome [BR:
rno03041
]
312320 (Igf2bp3)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
312320 (Igf2bp3)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
312320 (Igf2bp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
RRM_1
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_NusA_2nd
KH_NusA_1st
MOEP19
KH_Vigilin
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
312320
NCBI-ProteinID:
NP_001359041
RGD:
1306512
Ensembl:
ENSRNOG00000009052
UniProt:
A6K0K4
A0A0G2K0Y2
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All DBs
Position
4:complement(79391367..79525923)
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AA seq
579 aa
AA seq
DB search
MNKLYIGNLSDHAGPADLESVFKDAKIPVAGPFLVKTGYAFVDCPDEGWALKAIEALSGK
MELHGKPMEVEHSVPKRQRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETA
VVNVTYSSKDQARQALDKLNGFQLENFTLKVAYIPDETAAQQSPSPQLRGRRGPGQRGSS
RQTSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAA
EKSITILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNL
QAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAI
IGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFV
SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKIT
GHFYACQVAQRKIQEILTQVKQHQQQKALQSGAPQSRRK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattgtacatcgggaacctcagcgaccacgccggccccgcggacctggaaagt
gtcttcaaggacgctaagatcccggtggccggccccttcctggtgaagacgggctacgcg
ttcgtggactgcccggacgagggctgggccctcaaggccatcgaggcgctttcaggtaaa
atggaactacatgggaaaccgatggaagttgagcactcggtccccaaacggcagaggatt
cggaaacttcagatacgaaatatcccaccccacttacaatgggaggtgctggatagttta
ctagtccagtatggagtggtggagagctgtgagcaagtgaacacggactcggaaacagca
gttgtaaatgtaacctattccagtaaggaccaagctagacaagccttagacaaactgaat
ggattccagttagagaacttcaccttgaaggttgcctacatcccagatgaaactgctgcc
cagcaaagcccctcacctcagctccgagggcgccgggggccagggcagcggggctcatcc
aggcagacgtctccaggatccgtgtccaagcagaagccctgtgacctgccgctgcgcctg
ctggtgcccacccagtttgttggagccattataggaaaagaaggtgccaccattcgcaac
atcaccaaacagacccagtctaagatcgatgtccatcgtaaggagaatacaggggccgcg
gagaagtccattactatcctctctacccctgaaggcacttctgcagcttgtaagtctatt
ctggagattatgcataaggaagcgcaagatataaaattcacagaggagatccccttgaag
attttagctcacaataactttgtaggccgtctcattggtaaagaaggaaggaaccttaaa
aaaattgagcaagacacggacactaaaatcacgatatctccattgcaggaactgacgttg
tacaatccggagcgtaccattacagttaaaggcaatgttgagacgtgtgccaaggctgag
gaggaaataatgaagaagatcagggagtcctatgaaaatgacattgcttccatgaatctt
caagcacatttaatccctggattaaatctgaatgccttgggtctgttcccacccacttca
gggatgccacctcccacctcagggcccccttcagccatgactcctccctaccctcaattt
gagcaatcagagacggagaccgtgcacctgttcatccccgccctgtcggtcggtgccatc
attggcaagcagggtcaacacatcaaacagctttctcgttttgcaggagcttcgattaag
atcgcgccagccgaagcaccagatgctaaagtgaggatggtgatcatcactggaccacca
gaggctcagttcaaggctcaggggagaatttatggaaaaattaaagaagaaaactttgtg
agtcctaaggaagaggtgaaacttgaagctcacatcagagtgccgtcctttgctgctggc
agagtcattgggaaaggaggcaaaacggtgaatgaactccagaatttatcaagtgctgag
gttgttgtcccccgtgaccagacacctgatgagaatgatcaagtcgttgtcaaaataact
ggccacttctatgcttgccaggttgcccagaggaaaattcaggaaattctgactcaggta
aagcagcaccaacagcagaaagctctgcagagtggagcacctcagtcaaggcggaagtaa
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