Rattus norvegicus (rat): 312365
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Entry
312365 CDS
T01003
Symbol
Mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
312365 (Mindy4)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
312365 (Mindy4)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
312365 (Mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
PDGF_N
Motif
Other DBs
NCBI-GeneID:
312365
NCBI-ProteinID:
XP_038964608
RGD:
1562590
Ensembl:
ENSRNOG00000011530
LinkDB
All DBs
Position
4:85689049..85797553
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AA seq
824 aa
AA seq
DB search
MDSLYVEEVAASLVREFLSRKGLNKTFMTMDQERPRCELSINSRNDLRRVLHLEFLYKEN
KTKEKPLKTNLELITRYFLDHFGNTDSTESQEAPIPAIPIPKKNSKLPLRYPEATLVNIY
DLSDEDTGRRTSWSETGKARHDNLDGDIFGNFMSSKKNPYKSKPAHMVLGDSLPLVPAWE
KVDQLHSSEPGIDMKRTVERTRPKSGLIVRGMMAGPVASSSQDSFRKRSLRRSSTLSRKL
QAPEESQQQSEPFVHTPVCPGPQEVSASSSDSFSRSPLGQLNELSIEKPNATPSSQGPCQ
RDRPRLRSISEDSPLGYSHTEIITTPLRLDLPDGNSRMPQERLERAFKRQGGQPPSLRFK
VMETSLLSQTLIPSLEGKSGKLCAKKCHFHQVFMPLGRWRRRSGVLTRGKVSWCLTGRVI
SQTPCSWVGEAHPAGLRLHMWLSPEDVEDELIKEDIVLFPPPSMLKLLTVSKPIDLSLAK
EIKTLLFGSTFCCFSEEWKLQNFSFNDIASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFE
GDNRINSNLQLQPSDAQRTRCLALAIADILWRAGGKEQAVVALASGTPHFSPTGKYKADG
VLETLTLYSLTSSEDLVTFLQQSVHQFEAGPYGCILLTLSAILSRSLELVRQDFDVPTSH
LIGAHGYCTQELVNLLLTGRAVSNVFNDVVELDSGDGNITLLRGIEARSDIGFLSLFEHY
NVCQVGCFLKTPRFPIWVVCSESHFSILFSLQPELLCDWKSERLFDLYYYDGLANQQEEI
RLTVDTTKTAPEDNCSDLVPPLELCIRTKWKGASVNWNGSDPIL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacagtctgtacgtggaggaggtggccgcctccctggtcagggagtttcttagcaga
aagggtttgaacaagacgttcatgaccatggatcaggagcgcccccgctgtgagctgagc
atcaacagcaggaatgacctccgcagagttctacatctggagtttctctacaaggagaac
aagacaaaagaaaagcctctgaaaacaaacctggaactcattaccagatactttctggat
cattttggaaatacagacagcactgaaagtcaggaagccccgatccctgcaatccctatt
ccaaagaaaaacagcaaattgcctttgcgatacccagaggccacactggtgaatatatat
gacctttcagatgaagacacaggaagacggacatcatggtcagagacaggcaaagccagg
catgacaatctggatggggacatatttggtaatttcatgtcttcaaaaaaaaacccatac
aaaagtaagcctgcgcacatggtcctgggtgacagcctccctttggttcctgcgtgggag
aaggtggaccagcttcactcatcagagcctggcatagatatgaagaggacagtggagagg
accaggccgaagtctggcctgattgtccgaggcatgatggctgggcctgtcgccagctcc
tcgcaggactctttccgcaaacgctctctgcgacggtcctcgactttgagcaggaagctc
caagccccagaggagagccagcagcagtccgagccatttgttcacaccccagtctgtcca
ggaccacaggaggtctctgcttctagcagtgactccttctccaggagtcctctgggtcag
ctgaatgaactgtctatagagaagccaaatgctactcctagcagccaagggccgtgccag
agggacaggcccaggctaagaagtatttcagaggacagcccactggggtacagccacaca
gaaatcatcacgacacctttgaggctggacttgcctgacgggaattccaggatgccccag
gaacggctagaaagagcattcaagcggcaaggcggccagcccccgtctctcaggttcaag
gttatggagacatccttgctgtcccagactctcataccatccttggaaggcaagtctggg
aagctttgtgctaagaagtgccatttccatcaagtcttcatgcccctggggaggtggaga
aggaggagtggagtcctcactagaggaaaagtcagttggtgtctgacaggacgggtgata
agccagacgccctgcagctgggtaggtgaggctcatccggctgggctgcgtctgcatatg
tggctctctccagaggatgttgaagatgaactgataaaggaagacattgtcctgttccca
cctccgtcaatgctcaagcttctaactgtgtccaagccaattgacctctctctggctaag
gagataaagacccttctgttcggctctaccttttgctgcttcagtgaagaatggaaactc
cagaacttttccttcaatgacattgcctcgttaaaatacggcattgtgcagaacaagggt
ggtccctgtggggttctggcagcagttcaaggctgtgtgcttcagaaactcctgtttgaa
ggagataacagaatcaactctaatctccagctgcagccctcagatgcccagaggactcgc
tgccttgccctggccattgcagacatcctgtggcgagctggaggcaaagagcaagccgtg
gttgcactggcttcaggaacaccgcacttcagtccaacagggaaatacaaagcagacgga
gtcttagaaacactcacactgtatagtttgaccagctctgaggacctggtgacttttctc
cagcagagcgttcatcagttcgaagcgggaccctacggttgcatcctgctcaccttgtct
gccatcttgtccagatccctagagcttgtccgccaggactttgatgtccccaccagccat
ctcattggagctcacggatactgcacacaggaacttgtcaatcttctcctgaccgggaga
gccgtgtctaatgttttcaatgatgtagtggagctggactcgggcgatgggaacatcacg
cttctccgaggcattgaggcacgcagtgacatcggtttcttatctctctttgaacactac
aatgtgtgccaggttggctgcttcctgaagaccccaaggttccccatctgggtggtctgc
agtgagagccacttcagcatcctcttcagcctacagccagagctcttgtgcgactggaag
tctgagcggctctttgacctgtattattatgatggcttggccaaccagcaggaggagata
cggctgactgttgataccaccaagactgccccagaggacaactgcagtgaccttgtccct
cctcttgagctctgtatcagaaccaagtggaagggggcatctgtgaactggaatggctca
gaccccatcctgtga
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