Rattus norvegicus (rat): 312915
Help
Entry
312915 CDS
T01003
Symbol
Arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
312915 (Arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
312915 (Arfgef1)
Membrane trafficking [BR:
rno04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
312915 (Arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
312915
NCBI-ProteinID:
NP_001263985
RGD:
1560793
Ensembl:
ENSRNOG00000005703
UniProt:
D4A631
LinkDB
All DBs
Position
5:13764507..13859237
Genome browser
AA seq
1846 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKA
GSGTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQQHHLLQSPVSHHE
PESPHLRYLPPQTVDHIAQEQEGDLDPQTHDVDKSLQDDIEPENGSDISSAENEQTEADQ
ATAAETLSKDDVLCDGECEEKPQDIVQSIVEEMVDIIVGDMGEGTAVSASADGNAGAVED
GSDSENVQANGIPGTPISAAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDA
FLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQ
YLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFD
HKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNV
QELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYG
SLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQ
GMLGTTPEDIAQFLHQEERLDSTQAGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRL
FLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQV
KNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVAS
EKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVG
LQDCDDTDVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNI
DTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGT
KDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDF
VRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPN
EDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQM
VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTSGHIVTLVFEKHFPATIDSFQDA
VKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWF
PILFELSCVINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQ
QTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNC
LENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAAPPSPSAMSEKQLD
AISQKSVDIHDSAQPRSSDNRQQAPLVSVSPASEEVSKGRPTAKFPEQKLFAALLIKCVV
QLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLL
DCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDESR
VSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFY
YPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINKQ
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaagaagacgaagaacatgttcctgacccgggccctggagaagattttg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcgtgcgaggtggcc
ctagaggaaataaaagttgaaactgagaaacaaagtcctcctcatggagaagcaaaagct
ggatcaggcacccttccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
ttcttaccctttgagttggcatgccagtccaaatgtccccgcatagttagtacatctcta
gactgtttgcagaaacttattgcttatgggcacttgactggcagtgctccagatagtacg
acaccaggcaaaaagttaattgatagaattattgaaacaatatgtggctgcttccaaggc
cctcaaacagatgaaggagttcagttgcagataataaaggctttacttactgcagtaaca
tcacaacacatagaaattcacgaaggaactgtgctgcaagctgtgaggacatgctacaat
atctatttagccagcaaaaatctcatcaatcagacaacagccaaagctactcttactcag
atgctaaatgttatctttgcacgcatggaaaaccaagcattacaggaagccaaacaaatg
gaaagagaaagacatcggcagcagcatcacttgttacagtctccagtaagccatcacgag
cccgagtcacctcatcttagatatttgccacctcagactgttgatcatatagcccaagaa
caggaaggggatcttgatccccaaacacacgatgtggataaaagtctccaagatgacata
gagcctgagaacggatctgatatttccagtgcagagaatgaacagacagaagctgatcag
gcaactgcagctgaaacattatctaaagatgatgtgttgtgtgatggagagtgtgaggaa
aagccacaggatattgtgcagagcattgtggaagagatggtggacatcattgttggagac
atgggggaaggaacagctgtaagtgcaagtgcagatggcaacgctggagctgtagaggat
ggcagtgacagtgagaacgtgcaagccaatgggatcccgggaacacccatctctgccgca
tacacaccatcgttacctgacgacagattgtctgtctcctccaatgatactcaggaatct
ggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaaaaggatgcc
tttctagtgttcaggtcattgtgtaagctgtcaatgaaaccactgtcagatggaccacca
gatccaaagtctcatgagttacggtccaagattctttcattgcagttgcttctgtccatt
ctgcagaatgcaggacctgttttcaggacaaatgagatgtttattaatgctatcaagcag
tatctgtgtgttgcactctcaaaaaacggagtctcatctgttccagaggtttttgagctt
tctctttccatatttctaactttgttgtcaaacttcaagacacatctgaagatgcaaatt
gaggtattctttaaagaaattttcctgtacattttggaaacttctacaagctcatttgat
cataagtggatggtgattcagacactgacaaggatctgtgcagatgctcagagtgtggtg
gatatttatgtaaattatgactgtgacttgaatgcagcaaatatatttgaaagactagta
aatgacctgtcaaaaattgcccaaggaaggggcagtcaagaacttgggatgagtaatgtt
caggaattgagcctgcggaaaaaggggttagaatgtttagtttcaattcttaagtgtatg
gttgaatggagtaaggatcagtacgtgaatcccaactctcaaaccacccttggtcaggaa
aaaccctcagagcaagagataagtgaaatcaaacaccccgagactataaacagatatgga
agtttaaactccttagaatccacatcatcttcagggattggcagctacagcacacagatg
tctggcactgataatccagaacaattcgaggtcctaaagcagcaaaaagaaataatagaa
caagggattgatttatttaataagaaaccaaagagaggaatacagtacctccaagaacaa
gggatgcttggcaccactcctgaagatatagctcagttcttacatcaagaagaaagatta
gactctacacaggcgggggagttcctgggagataacgataagttcaataaggaagtcatg
tatgcatatgtagaccagcatgacttttcgggaaaagactttgtttcagctcttcgtctg
tttctggaaggattccggcttccaggagaagctcagaaaattgatcgattaatggaaaaa
tttgctgcaagatacctagagtgcaaccaaggacaaaccctttttgctagtgcagatact
gcttatgttttggcctactcaattatcatgttgaccacagaccttcacagtccacaggtt
aaaaacaaaatgacgaaagaacagtatattaaaatgaatcgtggtatcaatgacagtaaa
gatctccctgaagagtatctatctgccatttataatgagatagctgggaaaaaaatatca
atgaaagaaacaaaagaactaacaatccctacaaaatcaactaaacagaatgtagccagt
gaaaagcaaagacgacttctgtataatttagaaatggaacagatggccaagacagctaaa
gcactcatggaagctgtgagccatgttcaggcaccttttacaagtgcaacacacttggag
cacgtgaggcctatgtttaagttggcttggaccccttttctggctgccttcagtgtgggt
ctacaagactgtgatgatactgacgtggcctctctctgcctcgaagggatacgatgtgcg
atcagaattgcatgcatcttcagcattcagctggaaagagatgcatatgtccaggcacta
gccagatttaccttacttacagtgagttctggtattactgaaatgaaacagaagaatatc
gacacaataaaaacactcatcacagtggctcacacagatggaaattatttaggaaattcg
tggcatgagatcctgaagtgcattagtcagttagagcttgcacaacttataggaactgga
gtgaagcctcggtacatttctgggaccgtgagaggcagagaagggtctctcactgggaca
aaagatcaggctccggatgaatttgttggtctggggctagttggaggaaatgtggactgg
aagcagatagccagtattcaggagtctattggagaaaccagttctcaaagtgtcgtggtt
gctgtagacagaatattcacaggatccacaaggctagatggaaatgctattgtcgatttt
gttcgttggctctgtgccgtgtctatggatgaattgctttccactacacacccaagaatg
tttagtctacaaaaaatagtagaaatatcatactataacatgggaagaataagactgcag
tggtctcggatttgggaagttattggagatcattttaataaggttggttgcaatcctaat
gaagatgtagccatatttgcagtagactccctgaggcagctatcgatgaagtttttagag
aaaggagagcttgcaaacttcagattccaaaaggatttcttaagaccttttgaacatata
atgaaacgaaacaggtctccaacaattcgagatatggtcgtgcgttgtatagcgcagatg
gttaactctcaggctgccaatatccgttcaggatggaagaacattttctcggtgttccac
ctagctgcatcagaccaggatgagagcatagtagagctagcattccagacgagcgggcac
atcgtcactcttgtatttgaaaagcactttccagccactattgattctttccaggatgca
gtgaagtgtttatctgaatttgcgtgtaatgcggctttcccagacacaagtatggaagca
atccgacttattcgccattgtgcaaaatatgtgtctgatagacctcaggctttcaaagag
tacacaagtgatgacatgaacgtggcacctgaagacagggtgtgggtgagagggtggttc
ccaatcctctttgagttgtcctgtgtcatcaatagatgcaaattagatgtaagaaccagg
ggcttaacagtgatgtttgaaataatgaaaacatacggccacacttacgaaaaacactgg
tggcaggacttgttcagaattgttttcagaatctttgacaacatgaagttgccagaacag
cagacagagaaagctgaatggatgacaacaacttgtaaccatgccctttatgcgatatgc
gacgtgttcacccagtatttagaagtcctcagtgatgtacttttggatgatatttttgcc
cagctttactggtgtgtacaacaagacaatgagcagttagcacgatctggtacgaactgc
ttagaaaatgtggttattctgaatggtgagaagtttactctagaaatctgggataaaacc
tgtaattgcaccctggatatcttcaaaaccacaattcctcatgcgcttctgacttggcgt
cctacttctggagaggctgcccccccatctccatcagctatgagtgaaaagcagttggat
gcaatatcacagaaatctgtagacatacatgattctgctcaaccaagatcttcagataac
aggcagcaagcaccacttgtttctgtttctcctgcgagtgaagaagttagcaaagggaga
cccacagcaaaattcccagaacaaaaattgtttgctgccctgttgattaaatgtgttgtg
cagctggaactcatccagaccatcgacaacattgtgttcttcccagccacaagcaagaag
gaagatgcagaaaacttagctgcagcccagagagatgcagtggacttcgatgttcgagtt
gatactcaagaccaaggaatgtaccgctttttaacatcacaacaactcttcaagctactg
gactgcttattagagtcacatagatttgcaaaagcatttaattccaacaatgaacagagg
actgctctatggaaagcaggcttcaaaggcaagtccaagcccaatctcctaaaacaagag
acaagcagcctggcgtgtggactgcgcatcctcttccggatgtacacagacgagagcaga
gtcagcgcctgggaggaggtccagcagaggcttttaaacgtctgcagtgaggcactgagt
tacttcctcactctaacatctgaaagtcaccgggaagcctggaccaacttactgttactg
ttcctcactaaagtcctcaagatcagtgacaacaggtttaaagctcacgcatcattctac
taccctctgttatgtgaaattatgcaatttgacttgattcctgaacttcgtgctgttctt
agaagatttttcctgcgaattggaatagtatttcagatatcacaaccacctgaacaggaa
cttgggataaacaagcaatga
DBGET
integrated database retrieval system