Rattus norvegicus (rat): 312974
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Entry
312974 CDS
T01003
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
312974 (Chd7)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
312974 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
CHDCT2
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
312974
NCBI-ProteinID:
NP_001101376
RGD:
1311921
Ensembl:
ENSRNOG00000006689
UniProt:
D3ZAP7
LinkDB
All DBs
Position
5:26609245..26792736
Genome browser
AA seq
2985 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFPSLQPSLHHPSPN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGGSGG
GQMGVYPGMQNDRHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQQPQPAPSGPPAQGHPQH
MQQMGSYLARGDFSMQQPQQRMSQFSQGQEGLSQGSPFIATSGPGGHLSHMPQQSPNIAP
SLRHPVQQQFHHHPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVPSPTVNNS
GQYSPYPYRNLNQGLVNSTGMNQNLGLTNSTPMNQSVPRYPNAVGFPSNSGQGLMLQQPI
HSSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPMDVGSY
PNMPHPQPSHQPPGAMGIGQRNMGPRNIQQPRPFMGMSSTPRELTGHMRPNGCPGVGLAD
AQAIQERLIPGQQHPGQQPPFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQNTP
QKVPVRQHSPSEPFLEKPVPDMTQVSGQNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIAA
GDPSKGFGKDDFPGGVDNQELSRNSLDASQEETKKRKRPKVKKDPKELKEPREKKEPKTP
KAPKTPKEPKERKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTP
PPSPGPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSEQ
QESVDAEGPVVEKIMSSRLVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKR
IQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSL
PYEDSTWELRQDLDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLREY
QLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNW
EREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDC
PELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL
EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT
NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKD
AHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY
PYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ
NDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNG
VQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAK
ASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKED
ELMEFSDLESDSEEKPCIKPRRPQDKTQGYARSECFRVEKNLLVYGWGRWTDILSHGRYK
RQLTEHDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVPR
GRKGKKVKAQSMQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQE
VIGDQAEKILEGADSSEADVWIPEPFHAEVPADWWDKEADKSLLIGVFKHGYEKYNSMRA
DPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRAPFKDEIDEF
ANSPPEDKEDSMEAQSTGKHSESNAELGQLYWPNTSSLTTRLRRLITAYQRSYKRQQMRQ
EALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQQ
FDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPEDEPPDLASLIEPITEERA
SRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSR
TDYHILNDPELSFLDAHKSFAQNRGASTVPSLNTLAMGFGQAPPVIASAHAHEEKVMEQA
EGKAEECEHSPAKERSDGKEEEEEAGGAKDSRQECEAEASSVKGELKGVEGSGDPGSKSV
SEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKTFDEESNASMSTARDETRDGFYMEDG
DPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPINRRQMFDFQGLVPGYPPS
TVDSPLQKRSFAELSMVSQASVSASEDITTSPQLSKDDALNLSVPRQRRRRRRKVEIEAE
RAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPNVST
PVSDAFKTQMELLQAGLSRTPTRHVLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHKRT
PLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGEEAPKNKDLV
DWLKLHPMYTVDMPSYVPKNADVLFSPFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNK
RNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGE
GASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAGL
MGFPPGLATAATAGGDAKGPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTTASS
QGEPEDGTSKAEEKGNDNEDENRDSEKSTDAVSAADSANGSVGAATAPAALPSNPLAFNP
FLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGASEEKAADKAEGGPCKDGET
LEGSDAEENLDKTIESSILEDEVAQGEELDSLEGGDEIENNGNDE
NT seq
8958 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatattttcagcgaaggc
cttgaaggcctcggggaatgtggctatcctgaaaacccagtgaatcccatgggtcagcag
atgcccatagaccaaggttttccctccttacagccgtccctccatcatccttcccctaac
cagaatcaaaccaagctgacccacttcgatcactataaccagtacgaacaaaagatgcat
ctgatggatcagcctaaccgaatgatgggcagcgcccccgggaacggattggcgtctccg
cactcccagtatcacacccctcccgtcccccaggtgccacacggaggaggcagcggtggc
ggtcagatgggagtctatcccggcatgcagaacgacaggcacgggcaatcttttgtggat
ggtggctccatgtggggcccccgggctgttcaggtaccagaccagatacgagccccctac
cagcaacagcagccacagccagctccgtcggggccaccagcgcagggccacccccagcac
atgcagcagatgggcagctatctggcgcgtggggatttctctatgcagcagcctcagcag
aggatgagccagttttcccaaggtcaggagggcctcagtcagggaagccctttcatcgcc
acctcaggaccgggcggccacttgtcgcacatgccccagcagagccccaacatagcccct
tccctgcgccacccagtgcaacagcagttccaccatcaccccgctgctctccacggagaa
tccgttgcccacagtcccagattctcccccaatcctcctcaacaaggggctgtcaggccg
caaacccttaactttagttctcggagccagacagtcccctcccctaccgtaaacaactca
gggcagtattctccgtatccttacagaaacctaaatcagggattagttaacagtacaggg
atgaatcaaaatttaggccttacaaacagtactccaatgaaccagtccgtaccaaggtac
cccaatgctgtaggattcccgtcaaacagtggtcaggggctaatgctccagcagcccatc
cactccagtggctcacttaaccaaatgaacacacaaactatgcacccttcgcagcctcag
ggaacttacgcctctccacctcccatgtcacccatgaaagcaatgagtaatccagcaggc
acacctcctccacaagtcagacccggaagtgctgggataccaatggacgttggcagttat
ccaaatatgccccaccctcagccatctcaccagccccccggtgccatgggaatcggacag
aggaacatgggccccagaaacattcagcagccacggccgttcatgggcatgtcctcgaca
cccagggagctgaccggacacatgagaccaaatggctgccccggtgtcggcctcgcggat
gcgcaagccatccaggaacgactgatacccggccagcaacaccctggtcagcagccaccc
tttcagcagttgccaacctgtcctccgttacagccccacccaggcctgcaccagtcttca
cctccacacccccatcaccagccttgggcacaactccacccgtcaccccagaataccccg
cagaaagtgcctgtgcgtcagcattctccatcggagccctttctagagaagccagtgccg
gatatgactcaggtcagcggacagaacgctcagctagtgaagagcgacgattacctgccg
tcaatagagcagcagccacagcagaaaaagaagaaaaagaaaaacaaccacatcgctgca
ggggatcccagtaaaggttttggtaaagatgacttccctggtggggttgataaccaagaa
ctgagcaggaactcactggatgcgtcccaggaagaaacaaagaaaaggaaaaggccgaag
gtcaaaaaagatccgaaggaattgaaggagccgagggagaagaaagagcccaagacccca
aaagccccgaagacccccaaagagccaaaggaaaggaaagcaaaaactgtcacgccaaaa
cccaaatccagcaaaaaatcaagtaataagaaaccggattcagaagcaagtgctttgaag
aaaaaggtcaacaaaggaaaaacagaaggttctgaaaattcagacttggacaaaacaccc
ccaccatcccctggccctgaagaagacgaagacccaggggtccagaagaggcggtccagc
aggcaggtgaaaaggaagcgctacactgaagatttggagttcaagatttctgatgaggag
gcagatgacgcagatgctgctgggagagactccccatccaacacctcacagtcagagcag
caggaatctgttgatgcagaaggcccagtggtggagaagattatgagcagtcgcttagtg
aaaaagcagaaggaatctggcgaggaagtagaagttgaggaattttatgtgaaatacaaa
aacttctcctatcttcattgtcaatgggcatcagtagaagatctggaaaaagacaagagg
attcagcaaaagataaaacggtttaaatcaaaacagggccagagcaaattcctttcagag
attgaggatgatcttttcaatccagattatgtggaagttgaccggataatggactttgca
cggagcacagatgaccggggcgagcccgtgactcactatctggtaaagtggtgctcactc
ccttatgaagacagcacatgggagctgaggcaggacctagatcaagcaaagatcgaagag
ttcgaaaagctcatgtccagggagccggagaccgagcgcgtggagcgacctcctgctgat
gactggaagaaatcggagagttccagggagtacaaaaacaataacaaactcagggaatac
cagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatttta
gcagatgaaatgggtttgggaaaaaccatccagtccattacatttctctatgagatatat
ttgaaaggaatccatggcccttttttagtcattgccccgttgtccacgatccccaactgg
gaaagggaattccgaacctggacggagttgaacgtggttgtgtatcacgggagccaagct
agtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgata
aaggggtcctataagttccacgccatcatcactacgttcgagatgattctgaccgactgt
cccgagctgcgcaatatcccctggcgctgcgtggtcatcgatgaagcacacaggctgaag
aacaggaactgcaagcttctggagggactgaagatgatggacttggaacacaaagtgctg
ctgaccgggaccccgctgcagaacactgtggaggagctctttagcctgcttcatttcctg
gagccaagtcgcttcccttcagaaacaaccttcatgcaggaatttggcgatctgaaaaca
gaagagcaggtgcaaaaactacaggctattctaaagccgatgatgttgagacgcctgaaa
gaggatgtagaaaagaacttggcccccaaagaagagaccattattgaagttgagctaaca
aacattcagaagaagtattaccgagccatccttgagaagaattttacatttctttccaaa
ggtggtggacaagctaacgtacctaaccttttaaacactatgatggaactcagaaagtgc
tgcaatcatccttacctaatcaatggtgctgaagagaaaattctggaagagttcaaagac
gcgcacaacgcagattctccagatttccagctccaggcaatgatccaggcggccggcaag
ctggttctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgctcatc
ttttcccagatggtgcgctgcctggacatcctggaagactatctcatccagagacggtac
ccgtacgaaagaattgatggccgagtcagaggcaacctccgccaggcagctattgacaga
ttctccaaacctgattctgataggtttgttttcctcctgtgcacacgggcaggagggcta
ggcattaatcttaccgctgctgacacctgcatcatcttcgactcagactggaatccccag
aatgacctccaggctcaagctagatgccacagaatagggcagagcaaatccgtgaaaatc
tacaggctgatcaccaggaactcctatgaaagggagatgtttgacaaggctagcctgaag
ctgggtctggataaagccgtgttgcagtcaatgagtggaagagaaaatgccaccaatggg
gtacaacagctgtccaagaaggaaatagaagacctcctacgaaagggggcttatggtgca
cttatggatgaagaagatgaagggtctaagttttgtgaagaagatattgaccagattctc
cttcgtcgaacccacactattaccattgagtccgaaggaaaaggttccacattcgcgaag
gccagttttgttgcatctggaaataggacggacatttctttggatgacccaaatttctgg
cagaagtgggctaagaaggctgaattggacatcgatgccttaaacgggaggaacaacctg
gttatcgacaccccgagagtgaggaagcagacccggctctacagcgcggtgaaggaggat
gagctcatggagttctccgacctggaaagtgactctgaagagaagccttgcataaagcct
cggcggccccaggataagactcagggctatgcccggagcgagtgcttcagggtggagaag
aatctgctggtgtatggctggggccgctggacagatatcctgtcccacggacgctacaaa
cgtcagctcacggagcacgatgtagaaaccatctgcagagccatcctggtgtactgtctg
aatcactaccgaggggacgagaacatcaagagctttatctgggacctgatcactcccacg
gccgatggccagactcgagccctgctcaatcattccggtctgtcggcccccgtgccaagg
ggccggaaggggaagaaggtgaaggcccagagtatgcagcccgtggtacaggatgccgat
tggctggcgagctgcaacccagatgccctgttccaggaggacagctacaagaagcacctg
aagcaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaagaa
gtgataggagaccaggcagagaagatcctcgagggcgctgactcaagtgaggccgacgtg
tggattcctgagccatttcatgcggaagttcctgcagactggtgggataaggaagcagat
aaatccctcttaattggagtgtttaaacatggctatgagaagtacaattccatgagagct
gaccccgcactctgcttcctggaacgagtcggtatgcctgatgccaaggccatcgctgcc
gagcaaagagggacagacatgctagcagatggtggtgacggtggggaatttgatagagaa
gatgaagatccggaatacaaaccaacgagagcgccattcaaagatgaaatagacgaattt
gcaaattctcccccagaggacaaggaagactccatggaggcccagagcacaggcaagcac
agtgagagcaatgctgagttaggtcaactttactggccgaacacgtcaagcctgactacg
cgtctgcgccggctcattactgcctatcagcgcagctataaaaggcaacaaatgaggcag
gaggccctaatgaagacggaccggcgcagacggaggcctcgggaggaagtgagagcgctg
gaggcggaaagggaagctattatatctgagaaaaggcaaaagtggacaaggagagaggaa
gctgacttttaccgtgtggtatccacctttggggttatttttgacccagtgaagcagcag
tttgattggaaccaattccgagcctttgccagactagacaaaaagtccgatgagagtctg
gagaagtatttcagctgcttcgtggccatgtgcaggcgggtatgtcggatgcctgccaag
cccgaggacgagccaccagacctcgcctcccttatcgaacccatcacagaggagcgtgca
tccaggacgctgtaccgcattgaactgcttcgcaaaatccgagagcaggtccttcatcac
ccacaactgagcgacaggctgaagctctgccagcccagcctagacctgccggagtggtgg
gagtgcggacggcatgacagggacctgctggtgggtgctgctaagcacggggtcagccgg
acagactaccacattctcaatgaccctgagttgtccttcttagatgcacacaaaagcttt
gctcagaaccgtggggccagtaccgtcccttctttgaatactctggccatgggctttggc
caggctcctccagtcattgcctctgctcatgctcatgaagaaaaggtaatggaacaggcc
gaaggcaaggcagaggagtgcgaacactcaccggccaaagagaggtcggatgggaaagag
gaggaagaagaagctggtggggccaaggacagcaggcaggagtgtgaggccgaggccagc
tctgtgaagggcgaactcaaaggggtggagggcagtggagaccctgggtccaagtctgtc
tcagagaaaggctcagaagaggatgaggaagaaaagctggaggacgacgataagtcggag
gagtcatcgcagccagaagcaggagctgtctcgagagggaagactttcgatgaagaaagt
aatgcttctatgagcactgctagagatgaaacccgagatggattctacatggaggacgga
gatccttcggtggctcagctccttcacgaaaggacatttgccttctccttttggcccaag
gacagagtaatgataaaccgattagacaacatctgtgaagctgtactgaaaggcaaatgg
ccaataaaccggcgccagatgtttgatttccagggcctcgtccctggttacccaccctcc
accgtggacagtcccctgcagaagaggagctttgccgagctctccatggtcagccaggcc
agtgtcagcgcaagtgaggacatcaccacatctcctcagctgtccaaggatgacgccctc
aacctgtctgtccctcgccagcggcggcggagaaggaggaaagttgaaatcgaggctgaa
agagccgccaagaggcgtaatcttatggagatggtggcccagcttcgagagtctcaggtg
gtctcagaaaatggacaagagaaagtcgtggacttatcaaaggcctcgagagaggcaaca
agttctacctcaaatttttcatctcttacttcaaagtttatcttgcctaatgtctccaca
ccagtgtctgatgcctttaagactcaaatggagctgctccaagcaggcctttcgcgcaca
cccacgaggcacgtgctcaacggctccctggtggacggagagccccccatgaagaggagg
cgaggcaggaggaaaaacgtggagggcctcgacctacttttcatgagccacaaacggacg
ccattaagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagactcca
ccaataagaaacattccttctcccggacagctggaccccgacacccggatccctgtgata
aaccttgaagacgggactaggctggtgggagaagaggctcctaaaaacaaggacttggtt
gattggctgaagctgcaccctatgtacaccgtcgacatgccaagttatgtaccaaagaat
gcagacgtgctcttttccccgtttcagaaaccgaaacagaaacggcatagatgtcggaat
cctaataaattggacataaacaccttgacaggggaagaaagagttcctgtggttaacaaa
cgaaatgggaagaagatgggcggagccatggcccctccgatgaaggacctgcccaggtgg
ctggaggagaaccctgagtttgcagtcgctccagactggaccgatatcgtcaagcaatct
ggttttgttcccgagtcaatgtttgaccggctcctcactggacctgtggtgcggggagaa
ggagccagcaggagaggacggaggcccaagagcgagatcgcccgagcagctgcagcggct
gctgctgtcgcctctacttcagggatcaaccctctattggtgaacagcctgtttgctggg
atggacctgacgagccttcagaatctccagaacctccagtccctccagctggcagggctc
atgggcttccctccaggactggccactgctgccaccgccggaggcgatgcgaagggcccc
gccgcagtgctgcccctgatgctgccggggatggcgggcctgcccaacgtgttcggcctg
ggcgggctgctgaacaaccccctctcagctgctactggaaacaccactactgcttcgagt
caaggagagccagaggacggcacttcaaaagcggaagagaaaggaaacgacaatgaagac
gagaaccgagactctgagaaaagcacagacgccgtttcggctgctgactctgcgaacgga
tctgttggtgctgctactgccccggctgcattgccctccaacccgctggccttcaaccct
ttcctcctgtccaccatggccccaggcctcttctacccatccatgtttctacctccagga
ctggggggattgacactgcctggcttcccagcactggcgggactccaaaacgccgtgggc
gccagcgaagagaaggctgctgacaaggccgagggaggcccctgtaaagacggagagacc
ctggaaggcagcgacgccgaggagaacctggacaagactatagagtcctccatcttggaa
gacgaggttgcacagggtgaagagctggactccctcgaaggcggggacgagatagaaaac
aacggaaatgacgaatag
DBGET
integrated database retrieval system
