Rattus norvegicus (rat): 313128
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Entry
313128 CDS
T01003
Symbol
Casp8ap2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
313128 (Casp8ap2)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
313128 (Casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
ADIP
DUF2959
DUF2205
Motif
Other DBs
NCBI-GeneID:
313128
NCBI-ProteinID:
NP_001101391
RGD:
1305771
Ensembl:
ENSRNOG00000006487
Vega:
OTTRNOG00000001345
UniProt:
A6IIJ5
D4A7V6
LinkDB
All DBs
Position
5:51809366..51848633
Genome browser
AA seq
1962 aa
AA seq
DB search
MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEE
ILTEEGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIK
TARVEINRKDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQ
KDIHPNTSQPNLEKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRG
RNGVRHSQGSRGTDRTQKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIK
SSTGLGNKSERSASSWEKETSRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAER
KGDVKFKPAGEEQGHRGRVDRALPPHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHG
FQDRRCSSSLSSNRNSKYPHSKEVSVAHQWENTPFKAERHRTEDRRKRERENKEESRHVK
SDKKSPPEHLQRTHKDTKKSTANGKRQTEQKHGKGPVSTSELSKGTDNRECTMKVENGPN
EAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQIIGVPKPSGVCDSQSLEKTETVACLP
SVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEENRLLFKSVENTVPCELLACGT
EISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHASEDFSQELGTKRHDDI
NSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPKLEPSLEERPKVE
NKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNNLRPIPEPI
SPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPVPKLD
KCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTV
HVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEV
MHMLRLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKS
LCDVIESNLKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVK
HENDSSEGKLGKKYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKH
QDQNKTNTTTVKHDVKRTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPA
AQHACVKSERGFEILTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELK
TPEKQLLESLKCESAPACTTEELVSEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVH
PDVLDENCMFEVSSNLALSKDNVYSSEKSKPCISSILLEDLAVSLTVPSPLKSDGHLSFL
KPEVLSTSTPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSWTSRSVASG
FQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGLKHGMVAEESLTPLPRTGKEADGAA
EKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQTQVPDIYEFLKDASNKVVHC
DQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHIDLTKDPATETKSLELM
DVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESKNESNEPVLTVEG
VGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLKSEPPSKSD
CLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRKHGSK
KREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLE
CQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatgatgacaatggtgatggaacgggtttgtttgatgtctgtcctgcctct
cctcttaaaaataatgatgaaggctcattggacatatatgctgggttggacagtactgtt
tctgacagtactgctaggtcctgcgtgtcgttcagaaactgtctggatttgtatgaagag
atcctgactgaagaaggaactgcaaaggaggcaacatacagtgacttgcagatagaatat
gggaaatgtcagcagcaaatgaaagatctgatgaaaagatttaaggaaatacagacacag
aacttgaacttaaaaaatgaaaaccagtctcttaagaagaatatctcagcacttatcaaa
actgccagagtggagataaaccgtaaggatgaagagataaatcatcttcaccaaagattg
tctgagtttccacattttcgaaataaccataaaactgcaagaacaaaagattcacgatcc
aaatctccccatttggacaattgttcaaagactgatcatggagttaaaagtgatgttcag
aaagatatacatcctaacacttcacaaccaaacttggaaaaggaagggaaatcacattct
gaagcacagaattctttgcacttgtctacgggtattgagaaacattgtacaaacaatgtc
tggtcacgttctccttaccaggttagtgaaggtaactcaaatgaagataatagaagagga
aggaatggcgtcagacatagccaaggtagcagaggaactgacagaacacagaaagacttg
aatagcagctgtaatgatggcgagccaagggacaaagaggctgcttccagactacacgga
aaccctgagaaacatggaagcagtgaagcaagggctgagaacaaaatttcagagattaaa
agtagcactggtttgggaaataaaagcgagcgcagtgcctcttcttgggaaaaagaaact
tccagagaaaggccacatactcgagtggaacctcaaaatgacaaaaatctagagagacaa
aatgaaagattacaaaatacacacagaaaagagcttcagtctcaggacaaagcagaaaga
aaaggtgatgtgaagtttaaaccagcaggagaggagcaggggcatcggggaagagtggac
cgtgcattacctcctcattccaagaatgacatgaaatattatggcttcaataagtatcat
ccagaagagagaaggggaagggaagatggtaaacgagacagaggcatgagcagtcatggc
tttcaagatagaagatgttcatcttctctttcaagcaacagaaatagcaaatacccacac
tccaaggaagtcagtgttgcacaccagtgggaaaatacacctttcaaagcagaaagacat
agaactgaggacaggaggaaaagagaacgagaaaacaaagaagaaagtagacatgtgaaa
agtgacaaaaaatcacctccagaacacttgcaaaggactcataaagacactaagaaaagt
actgctaatggaaagagacagacggagcagaaacacggtaaaggtccagtctctaccagc
gagctttctaaagggacagacaatagagagtgtacaatgaaagtggagaatgggccaaat
gaagcaaagggcaaggacttaaagttaagcttcatggagaagctgaacttaactctttct
cctgctaaaaagcagcctgtttgtcaagataacgagcatcaaataattggtgttcccaag
cccagtggcgtgtgtgactcacagtccttggagaagactgaaacagtggcatgtcttcct
tctgtcagtgaacaagatagagaggaacccaaatcagagttaccagagccaaaggaggct
ctttcagcaacatctcaacccaggaccagcattccagaaaataaagtgaaggaagaaaat
agattgttatttaaatctgttgagaatactgtgccttgtgaactgcttgcttgtggcacg
gaaatttccttcccagcacctgtagaaattgagcaagcaagatgtttggtccaatcaatg
gaagtggaagagacatgtgctggtgcaagggcagctgcttctgtggtgatgcgtgtatta
ccagaacatgcttctgaagacttcagccaagaattgggcaccaaaagacatgatgatata
aattcgtgtgatatttctgaaggtgggaaaaaaaaggtggttctttcaccaaaagcagca
gcagccagtgagagccatctggagcctgtggttgaagaacctagcatttcaccagtaaac
tgttcgggagacaataatcctaaacttgaaccttctcttgaagagagacctaaggttgag
aataaatcttctcctttggagccttgtttacctaaagagatgtttgtaccttcaccacag
aagactgagttgattgaccacaaaatagatactggagaatcaaactcggtatatcaagat
gatgataactcagttttgagtattgactttaataatttgagacctattccagaacccatc
agccctctgaatagtccagtgagaccggtatccaaagttcttagcatggagagctcatgt
acaattccactgtatgatagcagccataaagatgagtttccatccaattcaactctttct
accttcaagagtcagtctgatctaaataaggaaaatgaaaaaccagttcccaaattggac
aaatgttcagaagcagaatcctgtaagaatttgtctgtagatgaattagaagaaggggaa
attagaagtgatgatgaagaatctgtagcacaaaagcgtttggaaaagagtgcaagaccc
agaacttctactgaagtgccgccaggtaaaatcagcccaggaagcaggaggagcactgtg
catgtgcataaggataacgggaggacagttgtaaaactccctcgggacagaatcacatgg
agccaaagatcaaatgaatctagaccctcaaacaccgaaaggaaaagtaaaacaatgagc
atctccagcttggaaaaaatacttccgcttattcttgcaccctcctccgtatgggaagtt
atgcatatgttacggttgctaggaaaacatgtaaggaaaaattacatgaaattcaagata
aaattttcattgacacaatttcatagaattattgaatcggcaattttgagtttcacatca
ctaattagataccttgatttgtctaagatctgtaaatcagtaagtactttacagaagagt
ctttgtgacgttatagaatctaaccttaaacaagtgaagaagaatggcatagttgaccgt
ttatttgaacaacaacaaacagatatgaaaaaaaaattgtggaagtttgtggatgaacaa
cttgattatttgtttgaaaaacttaaaaaaatcctactaaagttttgtgattctgtaaag
catgaaaatgacagtagtgaaggaaaacttggaaaaaaatataaagagagagcccaacat
tcaaattgtcagaagaagaaaatggacaacaaagaaatacggagagaaaaagtgctaaaa
tcagaaaatactgtgaattttaaatcttcactggggtgtgaaaaatttgaagaaaaacat
caagaccaaaataaaaccaatactactacagtaaagcatgatgtgaaaagaacttttagc
acttgcactgataataatacaaagaactctgaatgtaaagagcagtttctgggaatgaac
tgcccgagtacccccaggccaggagaaactgaaggcaatgtggaggaggggacaccggcg
gcacagcacgcctgcgttaagtcagagcggggctttgagatcctcaccgagcagcaggcg
tccagccttacttttaacttagtgagtgacgcacagatgggtgagatatttaaaagtttg
ctacaaggttctgatctgttggacacaggtggcactgaaaaagcggagtgggaattaaag
actccagagaaacagctgctagagagcctcaagtgtgagtctgcaccagcttgtacaaca
gaagagctagtttcagaggcggcttctctctgtccaaaggtgatcagtgatgataattgg
tctttattatcatctgaaaagggcccatctctatcttcagggctttcactgccagttcat
cctgatgtgttagatgaaaattgtatgtttgaagtatcttctaaccttgctttaagtaaa
gataatgtatacagctcagaaaagagtaagccctgcatttcttccatactcttagaagat
cttgcggtctctttaacagtaccgtcacctctgaagtcagatggccatttgagtttctta
aagcctgaagttttgtcaacttcaactcctgaagaagttattagtgcacattttagtgag
gatgctttgcttgaggaagaggatgcatctgaacaggacattcacttagctctagagtct
gataactcaagcagtaagtcaagctgttcctcatggacaagccggtctgttgcttcaggc
tttcagtaccaccctaatcttcccatgcatgctgtcattatggaaaagtccaatgatcat
ttcattgtgaaaatacggcgtgcaacaccatctacctcccctggccttaaacatggtatg
gtagctgaggagtcgttgacacctttgcctagaactggaaaagaagctgatggggcagca
gagaaagaacctaccctgtttcagagtacagttttaaaccctgtccaagacttggaaaat
tccgacaaaagtattgataagagcaaaccaactcatgaagatcagaactctatagtacaa
acacaggttccagatatatacgaatttcttaaagatgcttcaaataaggtggttcattgt
gatcaagtggttgatgattgcttcaagttgcatcaagtatgggaaccaaaagtttctgag
agccttcaagaattgccttcaatggaaaaaaatgcacactctgttgatgatcatcttcct
aatacacacatagatctaacaaaagatccagctactgagactaaaagcttggagctaatg
gatgtaacagttttagatatcgatcacttggaacattctaaacccaacttagatcaagat
gcacagataacgtgtacttcgttacagcatgatgctgtagatgcttttattgatttgaca
catgatgtttcaaatgagagtaaaaacgaaagtaatgaacctgtgttaactgttgaaggt
gtgggatgccaggtaatatgtatagatgacgataaccacaaagaaggaaaagtggggaag
gtaaacagttccttagaatgtactgttgaggaaacctgtattgacttgacctcagagtct
gctggctcctttgaagtaaagagacacactttaaagtcagagcctccatcaaagtcggat
tgtttagagttgcctgagactctggggaatggtcacaagaagagaaagaacagtcctgct
gtgagtcactcttctcagaaaaagcaaagaaaggacatggacttaagtagtgaaaagacc
aagagacttagtcctaattctgatagaactggtgatgctcacagaaagcatggcagcaag
aagagggaacctgcagtaagtgacacatccttgtcatcagaggtcaacccagaggtgaag
ggctcaacagcaccacttgctacttttccaggaagcctttctgcaaaaaatgttatcaaa
aagaaaggagaaattatagtttcatggacaagaaatgacgacagggaaattttactggaa
tgtcagaaaagaatgccgtccctgaaaacatttacccacttggctgtcaaactgaataaa
aatccaaatcaggtttcagagaggttccagcaactgaaaaagctttttgagaagtcaaaa
tgcaggtag
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integrated database retrieval system