Rattus norvegicus (rat): 313409
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Entry
313409 CDS
T01003
Symbol
Dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin
KO
K09526
DnaJ homolog subfamily C member 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
313409 (Dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
313409 (Dnajc6)
03110 Chaperones and folding catalysts [BR:
rno03110
]
313409 (Dnajc6)
04131 Membrane trafficking [BR:
rno04131
]
313409 (Dnajc6)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
313409 (Dnajc6)
Chaperones and folding catalysts [BR:
rno03110
]
Heat shock proteins
HSP40 / DNAJ
313409 (Dnajc6)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
313409 (Dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
313409
NCBI-ProteinID:
NP_001402850
RGD:
1309900
Ensembl:
ENSRNOG00000052887
LinkDB
All DBs
Position
5:121232532..121398775
Genome browser
AA seq
968 aa
AA seq
DB search
MSLLGSYRKKTSSDGYESLQLVDSHGDSSARGAAAGTQRVTTGAVRSPARQPPHRASTTD
SSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLD
FTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRV
SECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLY
STPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFN
KQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRS
TIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEV
QPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGF
FASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQ
QEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVE
DVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNA
SSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHG
TPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQP
AGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDL
LSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLW
AGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFE
NQGQKPLY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcgggagctaccggaaaaagaccagcagcgatggttatgaatctttgcag
ctggtggacagtcacggggactcgagcgcacggggcgcggcggctggcacgcagagggtg
accacgggcgcggtgcgtagtcccgcccggcagcctccgcaccgcgccagcaccacggac
agctcaggtgcctcatctccagacatggagcccagctatgggggaggcctttttgatatg
gtgaaaggtggtgcaggtaggctattcagtaacctgaaggacaacttgaaagacaccctc
aaagatacatcctccagagtcatccagtctgttagcagctacacaaagggagacctagac
tttacttatgtcacttccaggattatcgtgatgtcctttcctatggacagtgttgacata
ggattcaggaatcaggttgatgacatccgtagctttttggattccagacatcttgaccac
tacacagtatacaacttgtcacccaagtcttaccgaactgccaagttccacagccgggtc
tcagagtgcagttggcccatcaggcaggccccaagtctacacaacctgtttgctgtgtgt
cggaatatgtataactggctgctgcagaatcccaaaaatgtctgtgttgtccactgcttg
gatggacgggccgcatcatcaattctggttggtgctatgttcattttctgtaatctctac
tctacgcctggccctgctgttcgattactctacgcaaagcgaccaggaattggactgtct
ccgtcccacaggaggtacttaggctacatgtgtgacctacttgcagataagccctaccgt
cctcacttcaagccgctcacaatcaaggcaatcactgtcagcccaattcccttcttcaat
aaacagaggaatgggtgccgcccttactgtgacgtactgattggagaaactaaaatattc
tcaacatgcacagacttcgaacgaatgaaagaataccgtgtccaagatgggaaaatcttc
atccctctgaacatcacagtccaaggtgacgtcattgtttccatgtaccacttgcggtca
accatcgggagccggctgcaggctaaggtgaccaacacacagatattccagctccagttt
cattctggatttataccactggacacaacagttttaaagttcaccaagcctgagttggat
gcatgtgatgtaccagaaaaatatcctcagctgttccaagtgacactggatatagaagta
cagccccaagacaaagtgatcgacctaactccaccatgggagcactactgcacaaaggat
gtgaaccccagcatcctcttctcctctcagcaggagcatcaggatactctggccttaggg
ggtcaggctccagcagatctccctccagaccatccgaggaatcttgggcaaggaggcttc
tttgcctctctgtgttggcaagatcagaaatcagagaagtcacggtgtgaggaggaccac
gcagccctggtgaatcaggaaagcgagcagtcggatgatgaactactgactctctcaagc
ccacatggcaatgctgatggtgacaagcctcatggagccaagaagcctggcaaaaagcag
caggagccagctgcgcctcctcccccagaggaggtggaccttctgggcctggaagggtcc
gatgtgagcacgaacttctcccccttggcagctcctcccagcaattctgaactgctgagt
gacctgtttgggggtggaggtgccacaggtcctgcccaggcaggacaggttggagtcgaa
gatgtgtttcacccaagtggacctgcgtctgcgcagtccacaccacgccgagccaccact
tccgcctctgcatcgccaaccctaagagtgggagaaggtgccacctttgacccttttgga
gcccctgctaagccaccaggtcaggatttgttgggctccttcctgaacacatccaatgct
tctagcgacccctttctgcagcccacgagaagcccttcccctacagtgcatgcttctagc
actcctgctgtgaacatccaaccagacattgctggaggttgggactggcatgccaaacca
ggaggttttgggatgggaagcaaatcggctgccaccagcccaacaggctcaacacacggc
acccctacccatcagagcaagccccagactctggatcccttcgctgacttggggacacta
ggcagctcttcatttgccagcaaacccaccacaccaactggattgggtggaggatttcca
cctctcagctcaccacagaaagcgtccccacagcccatgggtggagggtggcagcagcca
gccggctacaactggcagcaggcacagcctaagccacagtctagtatgcctcactcctcc
cctcagaaccgacccaattacaacgtgagcttctcagctatgcctgcagggcagagcgac
cgtggaaaaggatctactaacttagaaggaaaacagaaggctgctgactttgaagatctg
ctttccagtcaaggcttcaatgcccacaaagacaaaaaggggcctcgaacaatagctgag
atgagaaaggaggaaatggctaaggaaatggatcctgagaaactgaagatcctggagtgg
atagaaggcaaagagagaaacatcagagccctgctttccacaatgcacactgtgctgtgg
gctggggagaccaagtggaaacctgtgggcatggcagacctggtgacgccagagcaagtg
aagaaggtgtacaggagagccgtgctagtggtgcaccccgacaaggctactgggcaaccc
tatgaacaatatgcaaagatgatcttcatggagctaaatgatgcctggtccgaatttgaa
aaccaaggccaaaagcccttgtattaa
DBGET
integrated database retrieval system