Rattus norvegicus (rat): 313587
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Entry
313587 CDS
T01003
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
313587 (Zc3h12a)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
313587 (Zc3h12a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
313587
NCBI-ProteinID:
NP_001071139
RGD:
1306776
Ensembl:
ENSRNOG00000009131
UniProt:
A0JPN4
A6IS77
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Position
5:complement(142661193..142670051)
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AA seq
596 aa
AA seq
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MSDPCGKKLVQEISPTMSLWGLEDRHSCQGQPQPDQDPVAKEASASELQMKVDFFRKLGY
SSSEIHSALQKLGVQADTNTVLGELVKHGSATERECQASTDPCPQPPLVPRGGSTPKPST
VEPSLPEEDKESSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPSE
HRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSSQRPSP
ASQPNSMSLEAEPGSPDGKKLGTRSSPGPHQEGSTQTCAPAGRSLPVSGGSFGPTEWLPH
TLDSLPYTSQECLDSGIGSLESQMSELWGLRGGSPGESGPTRGPYTGYQTYGSKLPAAPA
FSPFRQAIGTGHFSVPTDYVPPPPTYPAREYWSEPYPLPPPTPVLQEPQRPRPRASGDPW
GRVSDLAKERAGVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLSE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccctgtgggaagaaacttgtccaagaaatcagccccaccatgagtctgtgg
gggcttgaggacagacacagctgccaaggtcaacctcagccagaccaggatcctgtggct
aaagaggcctctgcttccgagctgcagatgaaggtggactttttccgtaaactgggatac
tcgtcttctgagatccacagtgccctgcagaagctgggagtccaagcagacaccaacacg
gtgctgggggagctggtgaagcacggttcagctactgaacgagagtgccaggcctccaca
gacccctgcccccagccccctctggtgccccggggtggaagcacccccaagccttccact
gtagaaccctcactcccagaggaggacaaagagagcagtgacctgagaccagtggtcatc
gacggaagcaacgtggccatgagccatgggaacaaagaagtcttctcctgccggggcatt
ttgctggctgtgaactggtttctggagcggggccatacagacatcaccgtgtttgtgcca
tcgtggaggaaggaacagcctcggccagatgtgcctatcacagaccagcacattctgcgg
gaactagagaaaaagaagatcctggtgttcacgccatccaggcgggtcggtggcaagcgt
gtagtgtgctacgatgaccgattcattgtgaagctggcctatgaatccgacggagtggtg
gtgtccaatgacacataccgggacctccaaggcgagaggcaggagtggaagcgcttcatc
gaggagaggctgctcatgtactccttcgtcaatgacaagttcatgccccctgacgaccct
ttaggacgccacgggcctagcctggacaacttcctgcgtaagaaaccactgccttctgaa
cacaggaagcagccatgtccctatgggagaaaatgtacttatggaatcaagtgccggttc
ttccacccggagcggccaagccgcccccagcgctctgtggctgatgagctccgggccaac
gcccttctctcgccccccaggactccagtcaaggacaaaagtagccagaggccttcccct
gcctctcagcccaactccatgtccctagaggctgagccaggcagcccagatgggaaaaaa
ctgggtaccagatcctccccaggcccccaccaagaaggctcaacacagacctgtgctccg
gctggcaggagcctccctgttagtgggggcagctttgggcccacagagtggctcccacac
accctggactcgctcccatacacctcccaggagtgccttgattcaggcattggctccctg
gagagccagatgtcagaattgtgggggttgcgaggaggtagccctggggagtcgggcccc
actcggggtccttatactggttaccaaacctatggatccaagctccctgcagcgcctgcc
ttttctccctttagacaagccatcggtactggccatttcagtgtccccaccgactatgtg
cccccgccacccacctacccagccagagagtactggtctgagccatacccattgccccca
cccactccagtccttcaggagccccagagacccagacccagggccagtggggacccctgg
ggcagggtgagcgacctggccaaagaaagggctggtgtgtataccaagctgtgtggtgtc
tttcccccacacctggtagaagctgtgatgggtcgtttcccacagctcctggacccccag
cagctggccgctgagatcctttcttacaagtcccagcacctcagtgagtaa
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