Rattus norvegicus (rat): 313678
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Entry
313678 CDS
T01003
Symbol
Prdm2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
313678 (Prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
313678 (Prdm2)
03036 Chromosome and associated proteins [BR:
rno03036
]
313678 (Prdm2)
Enzymes [BR:
rno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
313678 (Prdm2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
313678 (Prdm2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
313678 (Prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-H2C2_2
zf-C2HE
zf-C2H2_ZNF462_1st
zf-C2H2_11
zf-MYST
PyrI_C
Motif
Other DBs
NCBI-GeneID:
313678
NCBI-ProteinID:
NP_001071116
RGD:
1594531
Ensembl:
ENSRNOG00000033522
UniProt:
Q63755
F1LQ66
LinkDB
All DBs
Position
5:complement(160704396..160815184)
Genome browser
AA seq
1706 aa
AA seq
DB search
MHQNTESVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVG
DKKKRSQVRNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRA
IYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRRGKKKSHENKNK
GIRTHPTQLKASELDSTFANMRGSAEGPKEEDERPLASAPEQPAPLPEVGNQDAVPQVAI
PLPACEPQPEVDGKQEVTDCEVNDVEEEELEEEEELEEEEEEELGEDGVEEADMPNESSA
KEPEIRCEEKPEDLLEEPQSMSNEAREDSPDVTPPPHTPRAREEANGDVLETFMFPCQHC
ERKFATKQGLERHMHIHISTINHAFKCKYCGKRFGTQINRRRHERRHETGLKRRPSMTLQ
SSEDPDDGKGENVTSKDESSPPQLGQDCLILNSEKTSQEVLNSSFVEENGEVKELHPCKY
CKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPQPPAEQAPPSQNVYVPSTEPEE
EGETDDVYIMDISSNISENLNYYIDGKIQTNSSTSNCDVIEMESNSAHLYGIDCLLTPVT
VEITQNIKSTQVSVTDDLLKDSPSSTNCESKKRRTASPPVLPKIKTETESDSTAPSCSLS
LPLSISTAEVVSFHKEKGVYLSSKLKQLLQTQDKLTLPAGFSAAEIPKLGPVCASAPASM
LPVTSSRFKRRTSSPPSSPQHSPALRDFGKPNDGKAAWTDTVLTSKKPKLESRSDSPAWS
LSGRDERETGSPPCFDEYKISKEWAASSTFSSVCNQQPLDLSSGVKQKSEGTGKTPVPWE
SVLDLSVHKKPCDSEGKEFKENHLAQPAAKKKKPTTCMLQKVLLNEYNGVSLPTETTPEV
TRSPSPCKSPDTQPDPELGPDSSCSVPTAESPPEVVGPSSPPLQTASLSSGQLPPLLTPT
EPSSPPPCPPVLTVATPPPPLLPTVPLSHPSSDASPQQCPSPFSNTTAQSPLPILSPTVS
PSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSCSSTSPSPPPLSAVSSVVSSGDN
LEASLPAVTFKQEESESEGLKPKEEAPPAGGQSVVQETFSKNFICNVCESPFLSIKDLTK
HLSVHAEEWPFKCEFCVQLFKVKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQR
DLHPDEVCTHHEFESGTLRPQNFTDPSKANVEHMPSLPEEPLETSREEELNDSSEELYTT
IKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTA
IRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKN
AFRRMGQPKRLSFNVELGKMSPNKLKLSALKKKNQLVQKAILQKNRAAKQKADLRDTSEA
SSHICPYCDREFTYIGSLNKHAAFSCPKKPLSPSKRKVSHSSKKGGHASSSSSDRNSSSH
PRRRTADTEIKMQSTQAPLGKTRARSTGPAQASLPSSSFRSRQNVKFAASVKSKKASSSS
LRNSSPIRMAKITHVEGKKPKAVAKSHSAQLSSKSSRGLHVRVQKSKAVIQSKTALASKR
RTDRFIVKSRERSGGPITRSLQLAAAADLSESRREDSSARHELKDFSYSLRLASRCGSST
ASYITRQCRKVKAAAATPFQGPFLKE
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaacactgagtctgtggcagccactgagactctggctgaggtacctgaacat
gtgcttcgaggacttccagaggaagtaagacttttcccatctgcagtcgacaagactcgg
attggtgtctgggctactaaaccaattttaaaagggaaaaagtttgggccatttgttggt
gataagaagaagagatcccaggttaggaataatgtgtacatgtgggaggtctactaccca
aatttggggtggatgtgcattgatgccaccgatccggagaagggcaactggctacgctat
gtgaactgggcttgctcaggagaagagcagaatttatttccactggaaatcaacagagcc
atttactataaaaccttaaagccaatcgcgcctggcgaggagctcctggtctggtacaat
ggggaagacaaccctgagatagcagctgcgattgaggaagagcgagccagcgcccggagc
aagcggagctccccgaagagccgcagagggaagaagaaatcacacgagaacaaaaacaaa
ggcatcagaacccaccccacacagctgaaggcaagtgagctggactctacctttgcaaac
atgaggggctctgcagaaggtccaaaagaagaggatgagaggcctttggcttcggcacct
gagcagccagcccctctgccggaggtggggaaccaagatgcagttccacaggtggccatc
cctctccctgcctgcgagccacagccagaggtagatgggaaacaagaagtcacagactgt
gaggtcaatgatgtggaggaagaggagctggaagaggaagaggagctggaagaggaggag
gaggaggagttgggagaagatggggtagaagaagcagacatgccgaatgaaagctctgcg
aaagagccggagatccggtgtgaagaaaagccagaagacttattagaagagccacagagc
atgtcgaatgaagctcgtgaagactctccagacgtgacccctcctccccacactcccaga
gctagagaggaggccaacggtgatgtacttgagacatttatgtttccgtgtcagcactgt
gaaagaaaatttgcaacgaagcaggggctagagcgtcacatgcacatccacatttctacc
atcaatcatgctttcaagtgcaagtactgtgggaaacggtttggcacacagattaacagg
aggcggcatgaacggcgccacgaaacggggttgaagagaagacccagcatgactttacag
tcctcagaggatccagatgatggcaagggggaaaatgttacttctaaagatgagtcaagt
ccacctcaactcgggcaagactgtttgatattgaactcagagaaaacctcacaggaagta
ctgaattcatcttttgtggaagaaaatggtgaagttaaagaacttcatccgtgcaaatac
tgcaaaaaggtatttggaactcacaccaatatgagacgacatcagcgtagagttcatgag
cgccacctgattcccaaaggtgtcaggcgaaaaggaggacttctggaagagccacagcca
ccagcagagcaggctccaccctcccagaatgtctatgtcccaagcacagagccagaggag
gaaggggaaacagatgacgtgtacatcatggacatttctagcaacatctctgaaaaccta
aattactatattgacggtaagattcagaccaacagcagcactagtaactgtgatgtgatt
gagatggagtctaattctgcacacttgtatggcatagactgtctgctcactccagtgacc
gtggagattactcagaacataaagagcactcaggtctctgtgacagatgatcttctcaaa
gactctcccagcagcacaaattgtgagtctaagaaacggaggactgccagtccacctgtg
ctccccaaaattaaaacggagacggagtctgattccacagcaccctcgtgttccttaagt
ctgcccctgagcatatccacagccgaggtggtgtccttccataaagagaagggcgtctat
ttgtcgtccaagctcaagcagcttcttcagacccaggacaagctgacccttcctgcaggg
ttttcagcagctgagattcctaagttaggtcccgtgtgtgcgtctgctcctgcatccatg
ttgcccgtgacctctagtaggtttaagagacgcaccagctctccaccgagctctccacag
cacagccctgcccttcgagacttcgggaaaccaaatgatgggaaagcagcatggacagac
acagtcctgacttccaagaaacccaagttagaaagtcgtagtgactcaccagcatggagt
ttgtctgggagagatgaaagagaaaccggaagccctccttgctttgatgaatacaaaata
tcaaaggaatgggcagccagttctactttcagcagtgtgtgcaaccaacagccattggat
ttatccagcggggtcaaacagaagtcagagggcacaggcaagactccagtcccatgggaa
tctgtattggatctcagtgtgcataaaaagccttgcgattctgaaggcaaggaattcaaa
gagaaccatttggcacagccagctgcaaagaagaaaaaaccaaccacctgtatgcttcaa
aaggttcttctcaatgagtataatggtgttagcttacctacagaaaccacaccagaggtg
accaggagcccaagtccttgtaaatccccagatacacagccagatcctgaacttggtcct
gactcaagttgctcagtccccactgctgagtctccacctgaagttgttggcccttcctca
ccccctctccagacagcctccttatcctccggtcagctgcctcctctcttaacccccaca
gagccttcttcccctcccccctgccctcctgtgttaactgttgccactccaccacctccc
ctccttccaaccgtccctctctcccacccctcttctgatgcctcccctcagcagtgtccc
tctccgttctcaaacaccactgctcagtctcctcttcccattctctccccaacagtgtct
ccctctccctctcccattcctcctgtagagccacttatgtctgctgcttcccctggtccc
ccaacactttcttcctcctcctcttcttcctcttccttcccttcctcttcctgctcctcc
acctccccctccccaccccctctttcagcagtgtcatctgtggtttcctctggggacaac
ctggaggcatctctgcctgcagtaactttcaaacaggaggagtcagagagtgaaggtctg
aaacccaaggaagaggccccacctgcagggggacagagtgtggtccaagaaacattcagc
aaaaacttcatttgcaatgtctgtgaatcgccttttctttccattaaagacctaaccaaa
catttatccgtccatgctgaagagtggcccttcaaatgtgagttttgtgtgcagctgttt
aaggttaagactgatctatcagagcatcgatttctgcttcatggggttggaaatatcttt
gtgtgttctgtatgtaagaaagaatttgccttcttatgcaatctgcagcagcaccagcgt
gatctccacccagatgaggtatgcacacaccacgagtttgaaagtgggaccctgaggccc
cagaacttcacagaccccagcaaggccaatgtggagcatatgccaagtttgccagaagag
cctttagaaacttctagagaggaggagttaaatgattcctctgaagagctttacacgacc
atcaaaataatggcttctggaataaagacgaaggatccagatgttcgacttggtctcaac
cagcactacccgagctttaaacctcctccatttcagtaccaccatcgaaaccctatgggg
ataggggtgacagccaccaacttcaccacccacaatattccacagactttcactactgcc
atccgctgcacaaagtgtgggaagggcgtcgacaatatgcctgagctgcataagcatatc
ttggcgtgtgcgtctgcaagtgacaagaagaggtacacccctaagaaaaacccagtgccc
ctgaaacaaactgtgcagcccaaaaatggagtggtggttctagacaactctgggaaaaat
gccttcagacggatggggcagcccaagagactgagcttcaatgttgaactgggtaaaatg
tctccaaacaagctcaagctgagtgcgctgaagaagaaaaaccagctggtgcagaaggcc
atccttcagaagaacagagccgcgaagcagaaggcggacctgagggacacttccgaggcg
tcctcacacatctgcccgtactgtgacagggagttcacatacattggcagcctgaataag
catgccgccttcagctgtcctaaaaaacctctttctccttccaaaagaaaagtttcccat
tcgtctaagaaaggtggccatgcatcatcttctagcagtgacagaaacagcagcagccac
ccccggaggcggactgcagataccgagatcaagatgcagagcacgcaggcacccttgggc
aagaccagagctcggagtacaggccccgcccaggcctcactgccctcctcgtccttcaga
tccagacagaatgtcaaatttgcagcttcagtgaaatccaaaaaagcaagctcttcatcc
ttgaggaattccagtcccataagaatggccaaaattactcacgtcgagggcaaaaaaccc
aaagctgttgccaagagtcattctgctcagctctcaagcaaatcctcccgaggcctgcat
gtcagagtgcagaagagcaaagctgtcatacagagcaagactgccctggccagtaagagg
agaacagaccggttcatagtgaaatctagagagcgcagcgggggcccaatcacccgaagc
cttcagctggcagctgctgcggacctgagtgaaagcaggagagaggacagcagtgccagg
catgagctgaaggacttcagctacagtctccgcctggcatctcgatgcggctcatcaaca
gcctcttacatcaccagacaatgcagaaaggtcaaggccgccgcagcaactccgttccag
ggacccttcctcaaagagtag
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integrated database retrieval system
