Rattus norvegicus (rat): 314171 Help Entry 314171            CDS       T01003                                  Symbol Prpf39 Name (RefSeq) pre-mRNA-processing factor 39   KO K13217   pre-mRNA-processing factor 39 Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:rno03041]     314171 (Prpf39) Spliceosome [BR:rno03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    Other SAPs     314171 (Prpf39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 Motif Other DBs NCBI-GeneID:  314171 NCBI-ProteinID:  NP_001101496 RGD:  1308702 Ensembl:  ENSRNOG00000004521 UniProt:  D4A5S9 LinkDB All DBs Position 6:88825227..88851342 Genome browser AA seq 664 aa AA seqDB search MQNSHMDEYRNSDNGSTGNSSEVVIEHPDFSTEIMNVTEMEQSPDASPSVRVSTEENEMA NAVDLPVTETEGNFPPEFEKFWKTVETNPQDFTGWVYLLQYVEQENHLMAARKAFDKFFI HYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPE TNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHH FQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHNGDDGPPGDDLPSGIEDITDPAKLI TEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFE IENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMA HMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIR NAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDLK QNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDT LKRKAENGSEEPEEKKAHTEDVSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYP PPPT NT seq 1995 nt NT seq  +upstreamnt  +downstreamnt atgcaaaattcccacatggatgagtacaggaactctgataatggcagcacaggcaacagt tcagaggtagtgatagagcatccagattttagtactgagattatgaacgttacggagatg gagcagtcgcctgatgcctctcccagcgtacgtgtatctacagaagaaaacgaaatggca aatgctgtggaccttccagtgacagaaacagaaggaaacttccctccagagtttgaaaaa ttttggaaaacagtagaaacgaatcctcaggattttacaggatgggtatatttgcttcag tatgtagaacaggagaatcacttgatggctgccagaaaagcatttgacaaatttttcata cattacccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacatgac aacattaaacaatcagatgaggtttatcgacgggggcttcaggcaatacctcttagtgtt gatctttggatacattatataaacttcttaaaagaaacattggaccctggtgatcctgag acaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaacggatttt cgatctgacaaattatgggaaatgtatataaactgggagaatgaacagggaaatctgaga gaagttacagctgtatacgatcgtattcttggtattccaacccagctgtacagtcatcat tttcagagatttaaagaacatgtgcaaaataacttgcctagagatcttttaactggtgaa cagtttattcagttgagaagggaattagcttctgtaaatggacacaatggtgatgacgga cctcctggtgatgaccttccatcaggaattgaagacataactgatccagcaaagctaatt actgaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaattat aatgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaagaccttatttt catgtgaaaccactggaaaaggctcagctaaaaaactggaaagaatacttagaatttgaa attgaaaatgggactcatgaaagagtcgtggttctctttgaaagatgtgtcatatcttgt gccctctatgaggagttttggattaagtatgccaagtacatggaaaaccacagcattgaa ggagtgaggcatgtcttcagcagagcctgtactgttcatctcccaaagaagcccatggcg cacatgctgtgggcagcttttgaggaacaacaggggaatattaatgaagccaggattatc ttgagaacgtttgaagaatgtgttctaggattggcaatggttcgattgcgaagagttagt ttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaagacgctataagg aatgccaaatcaaataatgagtcatcattttatgctatcaaactagcccgacatcttttc aaaatacagaaaaaccttccaaaatcaagaaaggtacttttggaagcaatcgaaaaagat aaggaaaacacaaagttatacctcaatttacttgaaatggaatacagttgtgacctcaag caaaatgaagaaaatatcctcaattgctttgacaaagccatacatggttcgttgcctatt aaaatgagaattacgttttctcaaagaaaagtggaattccttgaagattttggctcagat gttaataagcttctgaatgcatatgatgaacatcaaacacttctaaaagaacaggacact ttaaaaaggaaagctgaaaatggctcagaagaaccagaagaaaagaaagcacacacagaa gatgtatcatcagcacagatcattgatggggatttacaggcaaatcaagctgcatataat tacagtgcctggtatcagtacaattatcagaatccctggaattacggacagtattaccct ccacctccaacctga

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