Rattus norvegicus (rat): 314259
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Entry
314259 CDS
T01003
Symbol
Pals1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04390
Hippo signaling pathway
rno04530
Tight junction
rno05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
314259 (Pals1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
314259 (Pals1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
314259 (Pals1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
314259 (Pals1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
PDZ domain-containing proteins
MAGUK family proteins
314259 (Pals1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
314259
NCBI-ProteinID:
NP_001101504
RGD:
1308071
Ensembl:
ENSRNOG00000008788
UniProt:
B4F7E7
LinkDB
All DBs
Position
6:103327965..103384543
Genome browser
AA seq
675 aa
AA seq
DB search
MTTSYMNGHVTEESDSGIKNLGLASPEEHPKHREMAVDCPGDLGTRLMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYAVK
ILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVHMNKASPPF
PLIANVQDLVQEVQTVLKPVHQKEGQELTALLNAPHIQALLLAHDKVAEQEMQLEPITDE
RVYESIGHYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRNRRDHEVAGRDYHFVSRQAFEADI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRAQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcgtatatgaatgggcatgtgacagaggaatcagacagcggaataaaaaat
cttggtcttgcatcaccagaggaacatccgaaacacagagagatggctgttgactgccct
ggagatttgggcaccagattgatgccagtgcgaagaagtgcacagttagagcgcattcga
cagcaacaggaggatatgagacgtaggcgtgaagaagaagggaaaaagcaagaacttgac
ctaaattcttccatgagacttaagaaactagctcaaattcctccgaagactggaatagat
aaccctatatttgacacagaagaaggaattgttttagaaagtcctcactatgctgtgaaa
atattagaagttgaagacttgttctcttcacttaaacatatccagcacactttggttgat
tctcagagccaggaggatatttcactgcttttacagcttgtacaaaatagagattttcag
aatgcattcaagatacacaatgctgtcacagtgcacatgaacaaggccagccctccgttt
cctcttatcgccaatgtacaagaccttgtacaagaggtacaaactgtcttaaagccagtc
catcagaaggaaggacaagaattaactgctttgttaaatgctccacatattcaggcactt
ttactggcccatgataaggttgctgagcaggaaatgcagctagagcccataacagatgag
agagtctatgaaagtatcggccattatgggggagaaactgtaaaaatagttcgtatagaa
aaggctcgggatattccattgggtgccacggttcgtaatgagatggattctgtcatcata
agtcggatagtgaaaggaggcgcggcagagaagagcgggcttctgcacgaaggagacgaa
gtcctagagatcaatggcatcgaaatccggggcaaggacgtcaatgaggtttttgacttg
ttgtctgatatgcacggtacgttgacatttgttctgattcctagtcaacagatcaagcct
cctcccgccaaagaaactgtaatccacgtgaaagctcattttgactatgacccctcagat
gacccttatgttccctgtcgagagttaggactgtcttttcaaaaaggagatatacttcat
gtgattagtcaagaagatccgaattggtggcaggcctatagagaaggagacgaagacaat
cagcctctagctggacttgttccagggaaaagttttcagcagcaaagggaagccatgaag
caaactatagaagaagataaggagccagaaaaatcaggaaaactatggtgtgcaaagaag
aataaaaagaagaggaaaaaggttttatataatgccaataaaaatgatgattatgacaat
gaagagatcctaacgtatgaagaaatgtcactttaccatcagccagcaaataggaaaaga
cctatcatcttgattggtccccagaactgtggccagaatgaactgcgccagagactcatg
aacaaagaaaaagaccgctttgcatctgcagttcctcatacaactcggaataggcgagac
cacgaagtagctgggagagattaccactttgtttcacggcaagcatttgaagcagatata
gcagctggcaagttcattgaacatggtgaatttgagaaaaacctgtatggaaccagcata
gattctgtacgacaagtaatcaactctggcaaaatatgtcttttaagtcttcgagcacag
tccttgaagaccctccggaattcagatttgaaaccatacatcatcttcattgcaccacct
tcacaagagagacttcgggcgttgttagccaaggaaggcaagaacccaaagccggaagaa
ttaagggagattattgagaagacgagagagatggaacagaacaacggccactacttcgac
actgcgattgtgaattcagatcttgataaagcctatcaggaactgcttaggcttattaac
aaactggacaccgagcctcagtgggtgccatccacctggctaaggtga
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