Rattus norvegicus (rat): 314329
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Entry
314329 CDS
T01003
Symbol
Irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
314329 (Irf2bpl)
04121 Ubiquitin system [BR:
rno04121
]
314329 (Irf2bpl)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
314329 (Irf2bpl)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Atypical E3
314329 (Irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
314329
NCBI-ProteinID:
NP_001012488
RGD:
1310994
Ensembl:
ENSRNOG00000011026
UniProt:
Q5EIC4
M0R567
LinkDB
All DBs
Position
6:complement(112258149..112262264)
Genome browser
AA seq
782 aa
AA seq
DB search
MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFSEPVCRGCVNYEGADRIEFVIETARQLKRA
HGCFQDGRSPGPPPPVGVKTVALSAKEAAAAAAAAQQQQQQQQQQQQQQQQPQQLNHVDG
STKPAVLPAPSGLERYGLSAAAAAAAAAAAAVEQRSRFEYPPPPVSLGSSSHAARLPNGL
GGPNGFPKPAPEEGPPELNRQSPNSSSAATSVASRRGTHSGLVTGLPNPGGGGGPQLTVP
PNLLPQTLLNGPASAAVLPPPHGLGGSRGPPTPAPPGAPGGPACLGGPPGVSATVSSAPS
STSSTVAEVGVGAAGKRPGSVSSTDQERELKEKQRNAEALAELSESLRNRAEEWANKPKM
VRDTLLTLAGCTPYEVRFKKDHSLLGRVFAFDAVSKPGMDYELKLFIEYPTGSGNVYSSA
SGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLPEAVRFFKEGVPGADM
LPQPYLDASCPMLPTALVSLSRAPSAPPGTGALPPAAPTGRGAAASLRKRKASPEPPDSA
ESALKLGEEQQRQQWMANQSEALKLTMSAGGFAAPGHAAGGPPPPPPPLGPHSNRTTPPE
SAPQNGPSPMAALMSVADTLGTAHSPKDGSSVHSTTASARRNSSSPVSPASVPGQRRLAS
RNGDLNLQVAPPPPSAHPGMDQVHPQNIPDSPMANSGPLCCTICHERLEDTHFVQCPSVP
SHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKER
DP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcgcaggtgtcctcgtcccggagacagtcttgctacctgtgcgacctgcct
cgcatgccctgggccatgatctgggacttctccgaacccgtatgccgtggttgcgtcaat
tacgaaggcgccgaccgcatagaattcgtgatcgagacagcacgccagctgaagcgggcg
cacggttgcttccaagacggccgctcccccgggccgccgccgccagtcggggtcaagaca
gtggccttgtccgccaaggaagcggcagcagcagctgccgccgctcagcaacagcagcag
caacaacaacagcagcagcagcagcagcagcagccacagcagctcaaccacgtcgatggc
tctaccaagcctgcagtgttgcccgccccgtccggtctggagcgctatggcctgagcgca
gcggccgccgcggctgctgccgccgccgccgcggttgaacaacgcagccgtttcgagtac
ccgcctcccccggtgagtctggggagcagcagccacgccgcccggctgcccaacggcctg
ggaggtcccaacggcttccccaagccggcaccagaggagggtcccccggagctgaaccgc
cagagccccaactcatcctcagcggcaacatcggtggcttctcggcgtgggactcatagt
gggctggtgaccgggctgcccaacccgggtggtggcgggggaccccagctcaccgtgccc
cccaacctattgccgcagacgctgcttaatggcccggccagcgccgcggtactgcctccg
ccccatgggctggggggaagccgagggcccccgactccagcacctccgggtgctcctggg
gggcccgcctgtctcgggggtcccccgggtgtgtcggccactgtatcctctgctccgtca
tcgacctcgtcgacagtggcagaggtgggcgtgggtgctgctggtaagaggcctggatcg
gtgtcgagcacagaccaggagcgtgagctaaaggaaaagcagcgcaacgctgaggccttg
gccgagctgagcgagagcctgcgcaaccgcgcggaggagtgggctaacaagcccaagatg
gtccgtgacacgctgctcacgctggctggctgcacgccctacgaggtgcgcttcaagaag
gaccattcgctgttgggtcgtgtctttgccttcgacgcggtctctaagcccggcatggac
tacgagctgaagctgttcattgagtatcccacgggctccggcaatgtgtactccagcgcg
tctggggtggccaaacagatgtaccaggattgcatgaaggactttggccggggtctgtcc
tctggcttcaaatacctggagtacgagaaaaagcatggctctggcgactggcgccttctt
ggggacctactgcccgaagctgtgcgcttcttcaaggagggcgtgcccggcgcggacatg
ctgccccagccctacctagatgccagttgtcccatgctacccacggcgctggtgagtctc
agccgcgcccccagcgcacctccaggaactggagccttgccacccgcggcgcccacgggc
cggggtgcagcagccagcctgcgcaaaaggaaggcatccccggagcctccagactcagct
gaaagcgcactgaagctcggtgaggagcagcagaggcagcagtggatggcaaaccagagc
gaggcgctgaagctcactatgtccgcggggggctttgcggcgccgggacacgcagcaggg
ggaccgcctccaccccctccacctctgggacctcattccaatcggaccaccccgcccgag
tcagccccccagaacggtccgtcccccatggccgcgctcatgtcagtagcagacactttg
ggcacagcgcattcgcccaaggatggcagttcagtgcactccaccactgcatctgctagg
cgaaacagcagcagcccggtgtcgcctgcctccgtgccggggcagcgtcgcctggcatca
cgcaatggggacctgaatttacaggtggcacccccaccgcctagcgcccacccgggcatg
gaccaagtgcacccccaaaacattccggattcccctatggccaacagcgggcccctctgc
tgtaccatttgccacgaacgtttggaggacactcatttcgttcagtgtccatccgtccct
agccacaaattttgtttcccttgttctagagagagtatcaaagcccagggggccacaggt
gaggtgtattgccccagcggagagaaatgccccctagtcgggtctaatgtaccttgggcc
ttcatgcagggcgaaatcgcaactatcttagctggggatgttaaagtgaaaaaagagaga
gacccttga
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