Rattus norvegicus (rat): 314630
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Entry
314630 CDS
T01003
Symbol
Rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
314630 (Rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
314630 (Rexo1)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
Pre-60S particles
RNases
314630 (Rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
314630
NCBI-ProteinID:
NP_001012114
RGD:
1309872
Ensembl:
ENSRNOG00000017916
UniProt:
D3ZCX6
LinkDB
All DBs
Position
7:9804740..9824717
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AA seq
1197 aa
AA seq
DB search
MLRSTGFFRSIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGSGGVTSPAAGLGYDPYN
PELPQPPVQRENGALGQGDGMLELELVNQAIEAVRGEVELEQRRYQELLETARGHGAGAS
ALAPCSPATSMDDDDTFSLALTYTPGGLLSPDAAYQPTPLAVPAEPGHKYSLAPSDRGQS
RAAGGAGALEYVPKAVGQPRRGGKYVVDSSKPSTDLEYDPLSNYSARHLGRTSTRDERAT
KRPRGSRGTEPYTPALKKPCDPSGGCEARFSDSEDDVSSPPKADDPESKAPGKPVSKEGI
EPEEGSLRVTKEMAVQYDVEDLGQPPKAPDTVSVVKPSSPARASQDAGVPKEGKAKKKKS
GTPASLSHKDKVRKKDKKKEKDPARPRGKEKVCADRKKLSSSSPRGKAQGLEGTKKKPSS
ATTVASSGKGGTGHPSSTGPQDRGPNSRAPLAWKGGCAKKMPSVKLAERKTRSLDEGAPQ
DTPKLKKRALSHAELFGDESEEEDSGLGTAPRVWPPTLPSLSSDSESDSDSSLGLGETKV
PKRLKAAPPASPAPPSPLSSSSSSGASQCAEEGVGYSALEKELDLDVDPMEECLRIFNES
TSVKTEDKGRLARQPPKEKAEEETHAGLTTLFPGQKRRVSHLSKPGKEAEAPKRTPVAPP
ARPPTAQEVCYRRAQQAQRDSASWLQAVPRPTERLSSVHISAPGEKRRIAHVPNPRLAAP
PTGAKRALPASGSQVSHGPEPGSQPLKTRTLSGMASKTTTTVTPKRMAHSPSLQSLKKPV
IPKEFGGKVPTVVRQRYLNLFIEECLKFCSSNQEAIEKALNEEKVAYDRSPSKNIYLNVA
VNTLKKLRGLVPNAVPNLSKASSRRVVSHEVVLGGKLAAKTSFSLSRPSSPRVEELKGTA
LYSRLREYLLTPEQLKENGYPFPHPERPGGAVIFTAEEKKPKDPSCRICCRCGTEYLVSS
SGRCVRNEECYYHWGRLRRNRVAGGWETQYMCCSAAVGSVGCQVAKQHVQDGRKENLEGF
VRTFQKELPEDAHAGVFALDCEMSYTTYGLELTRVTVVDTDMQVVYDTFVKPDNAVVDYN
TRFSGVTEADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGTVVDTSVL
FPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIREDAKTKR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgctacgttctaccggcttttttcgctccatcgactgcccatactgggcgggagccccc
ggggggccttgccggcggccctactgccacttccggcaccgcggagctcggggtcccggc
gctcccggtagcggcggcgtaacatctcccgcagcaggacttggctatgacccgtacaac
ccggagctaccccagcctcctgtgcagagggagaatggtgctctgggtcagggcgatggc
atgctggagttggagctggtcaaccaggccatcgaggctgtgcgtggcgaggtggagctg
gagcagaggcgctaccaggagctcctggagactgcacggggccacggtgctggggcttca
gcactggccccttgcagccctgccacaagcatggatgatgatgacaccttctccttggcc
ctgacttatacgccaggcggcctgctgagcccggacgctgcctaccagcccaccccattg
gctgtccctgccgagccagggcacaagtactcactggccccttcagacaggggtcagagc
agagctgcaggaggcgctggtgccctggagtatgtccccaaggctgtgggccagcctcgt
cgcggtggcaaatacgtggtggatagctcaaagccatcaacagatctagagtatgaccca
ctgtccaactattcagcccggcaccttggcaggaccagcactagggacgagagggccacc
aagcggccgcggggctccagaggtactgagccatacacacctgccctcaagaagccctgt
gacccctctggcggctgtgaggccaggttctcagactcagaagatgacgtgtccagcccc
ccaaaagccgatgaccctgaaagcaaggcacctggtaagcctgtctccaaggagggcata
gagcccgaggagggcagcctgcgggtcaccaaggagatggctgtgcagtatgatgtggaa
gacctcgggcagccccccaaagcaccagacacagtgtccgtggtcaagcccagctctcca
gccagggcctctcaagatgctggggtccccaaggagggcaaagccaagaagaagaaaagt
gggaccccagccagcctcagccacaaggacaaggtccgcaagaaagacaaaaagaaagag
aaggacccagccagaccccgaggaaaggaaaaggtgtgtgcagacaggaagaagctgtct
tccagtagcccccggggcaaagcccagggactcgaagggaccaaaaaaaagccatcctct
gctaccacagtggctagctcagggaaaggggggacgggccacccatccagcacggggccc
caggaccgtgggcccaattcccgtgcaccactagcctggaaaggtggctgtgcaaagaag
atgccatcagtaaagttggcggaacgcaagacccgctccctggatgaaggagccccccag
gacacccctaagctcaagaaacgggccctgagccatgccgaactatttggggatgagagt
gaggaggaggactcaggcctgggaacagcaccccgggtctggcccccgaccctgcccagc
cttagctcagactcagaatcagactctgactccagcctgggtctgggtgagacaaaggta
cccaagcgtctcaaggccgcgccgcccgcatcccccgcaccgccctccccactgtcctcc
tcctcgtcctctggagccagccagtgtgcagaggagggtgtgggctactcggccctggag
aaggagctggacttggatgtggaccctatggaggagtgcctgcggatcttcaacgagtcc
accagtgtgaagacagaggacaagggccggctggcccggcagccacccaaggagaaggcc
gaggaggagacgcatgcgggcctgaccactttgttcccagggcagaagaggagagtctca
cacctttccaagcctggcaaggaggcagaggccccaaagaggacccccgtggccccccca
gcacggcccccaactgctcaggaggtgtgctaccggcgagcacagcaggcacaaagggac
tcagccagttggctacaggctgtcccacggccaactgagaggctttcctctgtgcacatc
tcggcgccgggggagaagaggaggatcgctcacgtgcctaacccccgactggccgccccc
cccacaggtgccaagagggcgctccctgccagcggcagccaagtgtcccacggccccgaa
cctggcagccagccactgaagacacgtacgttgtcagggatggcatctaagaccaccacc
accgtcacccccaagcgcatggcccacagcccgtcactccagagtctaaagaagcccgtt
atcccaaaagaatttggtggcaaggtccccactgtggtccgccagcgctatctcaacctg
ttcattgaggagtgtctcaagttctgttcatccaaccaggaggccattgagaaggccctg
aacgaggaaaaggtggcatatgaccgcagtcccagcaagaacatatacctgaacgtggcc
gtgaacacccttaagaagctgaggggcctggtccccaacgccgtgcccaacctcagcaaa
gccagtagccgcagggttgtgtcccatgaggttgtgctggggggcaaattggcagctaaa
accagcttctcactgagccgccccagcagcccgcgggtagaggagctgaaagggactgcc
ctgtacagccgcctcagggagtacctgctcactccagagcagctgaaggagaatggctac
cccttcccccacccagagcgcccagggggcgcagtcatcttcacagctgaggagaagaaa
cccaaggacccctcctgcagaatttgctgtcgctgtggcaccgagtacctggtctcctcc
tcgggccgctgtgtgcgcaatgaggagtgttactaccactgggggcggctccggcggaat
cgagtggctgggggctgggagacccagtatatgtgctgctcagctgcagtcggatctgtg
ggctgtcaggtcgccaagcaacacgtgcaggatggccggaaggagaacctggagggcttt
gtgcgtaccttccagaaggagctgcctgaagatgcccatgccggggtctttgccctcgac
tgtgagatgtcctacactacatacggcctggagctgacacgagtcacagtcgtggacaca
gacatgcaggtcgtgtatgacacctttgtcaagcctgacaatgccgttgttgactacaac
accaggttctcaggggtgacagaggccgacctggtggacacgagcatcacgctgcgggac
gtgcaggccgtcctgctgagcatgttcagcgccgacaccatcctcattggccacagcctg
gagagtgacctgctggctctcaaggtcatccacggcacagtggtagacacctctgtgctg
ttcccacatcgcctgggcctgccctataagcgctcactgcggaacctcatggctgactac
ctcagacagatcatccaagacaatgtggacgggcacagctccagtgaagatgccagtgcc
tgtatgcaccttgtcatctggaagatccgagaagacgccaagaccaagcgatga
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