Rattus norvegicus (rat): 314740
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Entry
314740 CDS
T01003
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
314740 (Cfap54)
Cilium and associated proteins [BR:
rno03037
]
Motile cilia and associated proteins
Sperm associated proteins
314740 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
DUF7050
Motif
Other DBs
NCBI-GeneID:
314740
NCBI-ProteinID:
XP_038936010
RGD:
1565866
Ensembl:
ENSRNOG00000024494
UniProt:
A0A8I5ZLU8
LinkDB
All DBs
Position
7:complement(29203143..29489551)
Genome browser
AA seq
3171 aa
AA seq
DB search
MASSNNSSSSSEVSPGSETSVSPAQLPPTPPPTSTAVLKSPTESKSSSTIPPHWTRSEDL
LPSAAFYGPLDGKNPLLASCEKEIRELLGFMKKNKALATSEEQKHEFRRRCATTLFNIWT
KYAPRLPADYYNEKLLKVGDSLCQIKEYKLALLQCYGRYLQGFTTDFDFDENKEDVNQFK
TVFFPNGFGDEMARLTFHALSGKNICNYQLVCQSDANLQNEESVRQCLQILSSFRLIMQV
ALPQEHLCWIIFNGTLYIYTICRKLMVIGQSSKALEFLLWASMCMESSVPLLSVRYLTWR
ATLYTAVCQCHYDCQNGIHGETFARRALAKIDELRQLELMSSSSSLETSRKYYREATIKM
AVMIFKRGVFESRRKNKNVFRPKIRLNLKEAQSLPWPRTVTERLLDELLDSTSSRFLAVL
EALFDSNRRVLQTGPLQTDEMELRDVVSELFMAGKELLLLSNVGANGKLDFPKTHLLEQL
VERKNIISVGASVKFAKLAFTYEEWGLFESLAGQLIPFLQKQDSPKEKKAEKDLILLLAV
EPLINVKKNKGLIFPLDNDKETQSIQSYLKHIAYEESCVRTTYTEDIFSLAAILHFCVCV
PTKGIQPDKDIVVDIITLLWQKCKLGLQRLNIPKSDFTKYSHKISTNKWVYLLWQISEVV
HCYKLEDLDIVMVAEITLRLSEILESLGNPKRKFRKSADLSAKKGPDELPGTSKGVPESL
PILKRTPVEQLFYAYELLDRTIAGMNWNCMLTTLSDGSSVIDHCYVKDSHDVDGDTYKPI
ASNSYTMDLHLELIQAQHRIAVVLLDQLDALQIPTVSSNSSAKGWEKFKKARSTECFSEL
TVMKKIKKNTLSKAIYLMQKALLLFEKDTACETSWNLLTEAYALIEKVEAEQNALYSYQK
YLESTKVKRSRVPPPPILLARTHCSVTLKPAPFLSDVKVSWYCILGCKAERSYSKVRLNN
NHLPNSGEVIPADGRSFFEIKDLETNAKYIFALTAYSSSGKLIGDAIGETTKPILIYPPL
SAVTARMYLTQVAYQISNYELAKKVFSPVWDYFVAPPPQDNQSVICLSNIMTITQRRFHS
NILAETSSILLYLFLRNIFVMSDIKIKEENLFCDNIKGNEIFPAQQVARLVECENVLVAL
ELSNFLNDANFALQAVTQCYGLLAPIIYHNIVLVPVIQILIKCIVVLQGIPSVVHSKKNI
SSFESIQHMIACCIFYITKILRSWKEYDLAIMLINYGKKMLDITSGCKSLFGIDQEETTE
EGTCSKKTSKIKKSQQVLVPEKINEQLTFLETHLLKLTKQITFTELSGAEDPIFLYPVVL
NWNVKGAVKEVMKFKQRPRFLEFFTQIMLKCMNDEKFHLMVEICGPVYDFLKRRNESLIG
VKRIRYKETTVSRKMLKSPKKFKAIVIEIGRSSDLPRRRRKRKENLKDFFYKNPSIFDMA
ELERNKRTDVRKMAYRSLMDNLNPLILTYVKRKRFHQILLEELPWRAQMNLYLANAHFHM
FLQKLTERSKIKLGSSHSNVSFRSCDPNLFSLFHSGTILPTAKLTVDSYKAMMDVFSASK
KRKHNQPTDIDDLSALFNSKSDDTVVSKIKAQSTYDSDSQLGSGINIREKDRMLAWGLDH
FVKIFLCCRRAMVLAYRGGYWTLLQNCCRVFWNFSRELQILLKQIMDVCKAFPISQDSFL
CISVLPFYLGTELLIDMLIKLQSTNSIKPLEEKGEFSIPSCYGNIKSDNGGSSLTFEHPL
DDVNVVDLKWIHDFVLKSLEVLYQVEKWEMLVSLAIQFNTISHERYTEQVTPLLVYAQRQ
LVLRIEEMEGPDLSHQACARYEAETGEKITCRNFIGKQIMIDRSTPKNLAELDGSSDPLK
TLVLSEIKLAKQLVCVPIDVNDTLRCFRETLEKSNHHSRSVRHSRKLLSLFLAQTQGERG
GISSPKFTPGKVEFCLGTEEVHMSTPPDLSQENFRIFSSVEKTKLPSSQLGLVISSFYQT
IDVLQASNQRSLKVQTLHSLGSLLIFADKKRAAFKCWSQALDDIFRKPDVLHNWKEFGNS
LPSATSSSSPPGFKDYSEEFLSKFGIWGCLQGAVISAKIAQFIKTTNVKERINCCILSAL
LFQSLLRTTLPHPKAERSYAQYEITQLLPGIELFSDKFRADICIVVASLYYVIRELHYAK
YNLIVLPLLALYQYFVSVICQDLVRNLEARILKIEILIDLGLFSEAFYELSQIYQGKNMP
CAIPAGYKATTRVKITQSFDSGKPLTSKDNMQALEELVNRGLPSVLVNLGSQHLLNKFNF
VKSHFFISLAATVNCIPDNSPKIVYYPVIIDKSKPNTQNAKDNENSHAQLLRFRDDYTLN
TIKSILLMEAEDKINSLLSETERQCNRPLYLSSVADLEIMVEARLHLAAIALQRFRPAYS
TAIIYCTLKLLQDSKVFKKRLPEEPCSPTSPETSTTENKDDGEFLDPVSLNCREYFNIHL
WLRCRLMLVTSFVAQIRGIGIMKESELTDCLSLINEVCTEAKSADDTEVLAELLMQAVVL
GLQEKHFKADIIGKLQEIINLLEGSEFLSPRSWLTLAKSLILMDDLTKAEKFKKASSKEN
KLIFLNQAHRILIAQMLTFGETIEFPLSDADYASPLQPLKNIYLPHIMLLAKIKLRIGHT
LAKQVYSSSKKKDIGKWLPVLHVFDMALKVCRATAAEENEVEAEILFQKGRIERQMLMEE
KSPIAHVESFFEAIQISLRNDQNPGLLRDSYLEVALVYFYLKKPRKKTSVTVKPSPRRLS
SFKEPVATQVEMYSSLAWIAIRAAAQVSESVLAINLLIGKKSTRTDKVNNITLPNIPEFA
AADLLSSYTDYLLDNYQVVFQTSVSFACQNEDVYDCIDGRKRNLSKVDITWILLIRYYIH
LQRINNMSKLLASATPDSGISLPDDTIITSLYNSELILRQKEVHIFLKNFLQLYASSCID
GFPKELLQGLENTISLEKVLFESSDKVHQDSSLQSDLSGKLAGSTSYTDISSEMAVQALN
KELCFQWYIPPLDKPPKDTEPMVLLLYAYNLKPLVISDIKVPTGNNLYVGTSWIPLRRVI
QIHEKLSSLAQIAEISLPSVPEVASQENIYESIDIEDKPIDTDLENIILHCCSEIEALFS
LDKDKKPLPLTEVPFDVSLPAIFSLERLFDLANGCIVSVGSLFNWVVSIIS
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccaacaactcctccagctcttctgaggtatccccgggctctgagacatcg
gtgtcgccggcgcaactgcccccaacgccgccaccgacctccaccgcggttctcaagtcg
cccaccgagtccaagtcgagctccaccatccctccgcactggacccgctccgaggacttg
ctgccctctgccgccttctacgggcccctggatggtaaaaacccgctcctggcctcttgc
gagaaggagatccgggagctgttgggctttatgaagaagaataaggctctagccacctca
gaggaacagaaacacgaattccgtcggaggtgtgccaccactctgtttaatatctggacc
aaatacgccccccggctgccggccgactattacaacgagaagcttctgaaggttggagac
agcctgtgtcaaataaaagagtacaagctggctcttctgcaatgctatgggcgctatctc
caggggttcaccaccgacttcgacttcgatgagaacaaagaagacgtaaatcagttcaag
actgtcttcttcccaaacggctttggcgatgaaatggctagacttacatttcatgctttg
agtggaaaaaatatttgcaactaccagctggtctgccaaagtgatgccaatctgcagaat
gaagaatccgtgcgacagtgtctgcagatcctgtcttcctttagactcatcatgcaggtg
gcgctccctcaggagcacctttgctggattatcttcaacggtaccctttacatctacacc
atttgccggaagctgatggtcataggacagtcttccaaggccttagagttcctgctgtgg
gccagcatgtgcatggaatcctctgtcccgctcctgtctgtcaggtacctgacgtggaga
gccactctctacactgctgtctgccagtgccactatgactgccaaaatggcatccacggg
gagacatttgctcggcgtgcgttagctaaaattgatgagttaaggcaactggaattaatg
agctcctcctcttctctggaaacctcccgaaaatattacagagaggccacgataaagatg
gccgtgatgatcttcaaaagaggagtatttgagtctagaagaaaaaacaaaaatgtgttt
agaccgaagataagactcaacctaaaggaagctcaaagcttgccctggccacggacagtc
actgaacgactcctggatgagctgcttgacagtacctcgtcccggttcctggctgtcttg
gaagccctctttgactcaaaccggcgagtcctgcagactggaccactgcagactgacgaa
atggagctgcgtgacgttgtgtcggagctgttcatggctggaaaagagcttttgttactt
tcaaatgttggtgcaaacggcaaacttgatttccccaaaacacatctcctggagcagttg
gttgaaaggaaaaatattatttctgtgggtgcatctgtgaaatttgcaaagttggctttt
acttatgaagaatggggcttatttgaatcactagctggacaacttattccgtttctccag
aagcaggatagccccaaggaaaagaaagcagagaaggatttaattcttctgcttgcagta
gagccattgatcaatgtgaaaaaaaacaaaggtttgatctttcctttggataatgataaa
gagacccagtccattcaaagttatctaaaacacatagcttatgaagagtcttgtgtgagg
accacgtacactgaagatatttttagcttggcagcgattcttcacttctgtgtttgtgtc
cctaccaagggtattcagccggataaggatatcgttgtggacataataacactcttatgg
cagaaatgcaagctgggacttcaaaggctcaacatacccaaaagcgactttacaaaatat
tctcacaagattagcaccaacaaatgggtttatctcctgtggcagataagtgaggtggta
cactgctacaagctggaagatctggacatcgtgatggtggcagagatcacgttacggtta
agtgagatactagagtctctgggaaacccgaaaagaaagttcagaaagtctgcagatttg
tctgcaaagaaaggacccgacgagttgcctgggacttcaaaaggggtcccggaaagcctt
ccaatattaaagcgaacacccgtggaacagctgttttatgcgtatgaactccttgataga
acaatcgctggcatgaactggaattgcatgttaactaccttgtcagacggatcatccgta
atcgaccattgctacgtcaaggactctcatgatgtagatggagacacctataagccgatc
gcatcgaacagctacacaatggacctgcaccttgaactaattcaagctcagcaccgcata
gctgttgtgctcctggaccaactggatgctttgcagattccaactgttagctcgaactct
tctgccaagggctgggaaaaattcaagaaggccagaagcaccgagtgtttctcagagtta
actgtgatgaagaaaataaagaagaacacgctgtctaaagccatctacctgatgcagaag
gcccttttactgttcgagaaggacacagcgtgtgagacttcatggaacttgttgacggaa
gcgtatgctttaattgagaaggtcgaagcagaacaaaatgccctgtattcctatcagaag
tacctggagagtacaaaagtaaagaggagcagggtccctcccccacccatcctgctggcc
cgaactcactgctctgtgactctgaaacctgcaccattcctctccgatgttaaggtgtcc
tggtactgtattttgggttgcaaagcggaaagaagctatagcaaagtgcggctgaacaac
aaccacctccccaactcaggagaagtgataccagctgatggcagaagcttctttgaaatt
aaagatttggaaacgaatgcaaaatacatttttgcgctcactgcttattcttccagtggg
aaactcattggtgacgctatcggggagacaacaaaaccaattctcatttatccgcctctt
tctgctgtcaccgctcggatgtacctgacacaggtcgcatatcagatcagtaactatgag
ttggccaagaaagtgttctcaccggtctgggattacttcgttgcccctccaccacaggac
aaccagtcagttatctgtctaagcaacatcatgacaataacacagagaaggtttcattcc
aacatcttggcagagacttcttccatcctcttatacctcttcctcagaaatatctttgtg
atgagcgacattaaaattaaagaagagaatctcttctgtgataacattaaaggcaacgag
atcttccccgcccagcaagtcgctagattggtggaatgcgagaatgtgctggtggctctg
gagctcagcaacttcctcaatgacgccaactttgcccttcaagcagtgacccagtgctat
gggctccttgctcccattatctaccacaatatcgttttggtacctgtcatccagatcttg
ataaaatgtattgtggttttgcaaggaataccaagtgttgttcactcaaagaaaaatatt
tcaagctttgaaagtatacagcacatgattgcttgctgcatcttctacatcacaaagatt
ctgcgttcctggaaggaatatgacctggcaataatgcttataaattatgggaaaaagatg
ttggatatcacatcagggtgcaagtctctatttggtattgaccaagaggaaacaacagag
gaggggacttgttctaagaaaacttcgaaaatcaagaagtcacagcaggtgctggtgcct
gaaaagataaacgaacaactgaccttcttggagacccatctactcaaattgacaaagcaa
atcaccttcactgaactatctggagcagaggacccgatcttcctttaccctgtggtttta
aactggaatgtgaaaggcgctgtgaaggaagtcatgaaatttaagcaaagaccaagattc
ctggaattctttacacaaattatgctcaaatgcatgaacgatgagaagtttcacctcatg
gtagagatatgtggccctgtttatgacttcttgaaaaggagaaacgagtctcttattgga
gtgaaaaggataagatataaggagactacggtttctaggaagatgctcaaatctcccaag
aagtttaaggccatagtgatcgagataggaaggtcttcagacttaccaagacgccgaagg
aagagaaaggaaaatctaaaagactttttctacaagaatccgtccatttttgatatggca
gagctggaaagaaacaagagaactgacgttaggaaaatggcatatcgaagcctgatggat
aacttgaaccccttaatattaacttatgttaaaagaaagagattccatcaaatacttctt
gaagagctgccttggagagctcagatgaacctgtacctggcgaacgcacacttccacatg
tttttacaaaagctgactgagcgctcgaagataaaattaggctcttcccattcgaatgtc
agtttccggtcatgtgaccctaacctcttctcactattccactctggaacaattttacca
actgcaaagctgactgtagacagctacaaagcaatgatggatgtctttagtgcctctaag
aaaaggaagcacaaccaacccacagacatagacgatttatctgcacttttcaattccaaa
agcgatgataccgttgtttccaagattaaagcacaatcaacgtatgactcagattctcaa
ttaggttctggtattaatatcagagagaaggatcgaatgctggcttggggactggatcat
tttgtgaaaatcttcctatgttgcaggagagcgatggttcttgcttaccgtggtggctac
tggactctactgcagaattgctgcagggtcttctggaacttttcccgggagctgcagata
ctactgaagcagatcatggatgtttgcaaagcttttcctattagccaggatagctttctc
tgtatctctgtgctacccttttacctgggcacagaactgcttattgacatgttaataaaa
ctgcagagcaccaattctatcaagccattggaagagaaaggcgagttcagcattcccagc
tgctatgggaacatcaagtctgataacggcggttccagcctgacgtttgaacatcctttg
gatgacgtcaatgtggtggatttgaaatggatccatgactttgtgttgaagtctctggag
gttttataccaagtagagaagtgggaaatgctggtgtctcttgccattcagttcaatacc
atttcacatgagaggtacacagagcaagtgaccccactgttggtgtacgcacagcgccag
ctggtcctgagaatagaagagatggagggccccgatctctcccatcaggcttgtgccaga
tacgaggctgaaactggagagaagatcacctgtcgaaacttcattgggaagcagatcatg
attgatcgttccacacccaagaacctggctgagctagatggcagttctgacccactgaag
actctcgtcctttcagagattaaactagccaaacagctggtctgtgtgcccatagacgtg
aacgacactttgagatgcttcagagagaccctggaaaagtccaatcatcatagcagatcg
gtccgacacagcagaaaactgctttctttatttcttgcacagacacaaggtgaaagagga
gggataagcagcccgaaatttaccccagggaaggtggagttttgcctgggaacagaagag
gtgcacatgtcaacaccccccgacctttctcaagaaaacttccgaatttttagttcggtg
gagaaaaccaaacttccctcctcacagctggggctggtcatttcttccttctaccaaact
attgatgttctccaagccagcaatcaaaggagccttaaagttcagacactgcattccctt
ggaagtctcctcatctttgcagataagaaaagggctgcttttaaatgttggagccaagct
cttgatgacatctttagaaaaccagacgtgctgcacaactggaaagaatttggcaactcc
ctccccagtgccaccagcagttcctcacctcctggtttcaaagactacagtgaagaattt
ctatcaaagtttggcatctgggggtgtttgcaaggggcagtgatctcagcaaagatagcg
cagtttattaagaccacgaatgttaaggaaagaatcaactgttgtatattgtctgcgtta
ctttttcagagtctgctccggactacgctcccacatcccaaagccgaacgtagctatgct
cagtatgaaatcactcagctcctccccggcatcgagctcttctcggacaaattcagggct
gacatctgcattgtcgttgcaagcctgtactacgtcatccgcgagctgcactatgccaag
tacaacctcatagttctgcctctccttgcactataccagtatttcgtgtctgtcatttgc
caagacttagtgaggaatctagaagcaagaatcctcaagattgaaatccttatagattta
ggcctcttttccgaagccttttatgagctatcccagatttatcaaggaaaaaacatgccg
tgcgccatacctgctggctataaagctacaacgagagttaagataactcaatcattcgat
tctggaaaacctctcaccagtaaagacaacatgcaggcacttgaagagctagtaaacaga
ggcttgccctccgtcttggttaatcttggctcccagcatctcttaaataaatttaatttt
gtcaagtcacacttcttcataagtctggctgcaacggtaaactgtatccccgacaattca
ccgaaaatagtgtactacccggttattatcgacaagagcaaacccaacacccaaaacgca
aaagataatgaaaactcacatgcccagcttttgagatttagagatgactacacgcttaac
accatcaagtccattttgctgatggaggctgaggacaagatcaattccctgttgtcagag
acagagcgccagtgcaacaggcccctctatctgtcttctgttgctgacctggagatcatg
gtggaggccaggctgcacctggcagcaatcgccctgcagagattcaggccagcatacagc
accgccattatatattgcacactgaagcttctccaggattcgaaggtttttaaaaagaga
ctaccagaagagccatgcagccccacctctccagaaacttctaccacagaaaataaagat
gacggcgagtttttagacccagtttccctgaactgccgggaatacttcaatattcacctt
tggctgaggtgccgcttgatgttggtaacttcgtttgttgcacagattcgtggtattgga
atcatgaaagagagtgagttgacggactgtctgagccttatcaatgaagtatgcacagag
gcgaagagcgccgatgacaccgaggttctggccgagttactaatgcaagccgtggtcctg
ggccttcaggaaaagcactttaaggcagacatcataggaaagcttcaggaaattatcaat
ttgctggaagggagcgaattcctttcacccagatcttggttaaccctggctaaaagcctc
attttgatggatgacttaacgaaagctgagaaattcaagaaagcatcttcaaaagagaac
aaattaattttcttgaatcaagctcacagaattcttattgctcagatgctaacttttgga
gagaccattgaattccccctctcagatgctgactacgcgagtccactacaaccgttgaag
aatatctaccttcctcacatcatgttactggccaaaataaaattgaggattggacacacc
ttggccaagcaggtgtattccagcagcaagaagaaggacatcggtaagtggctgcctgtt
cttcacgtctttgacatggctttgaaggtctgcagggcaactgcagcagaggaaaatgaa
gtggaggctgaaattctgtttcagaaaggcagaatagaacgtcaaatgctgatggaagag
aaatctccaattgcacacgtagagagcttttttgaagctattcaaataagcctgagaaat
gaccaaaacccagggttgttaagggactcctacctagaagtcgccctggtgtatttctat
ctgaagaagccaaggaagaagacttcagtgacagtcaagccttctcccagaaggcttagt
tcttttaaagaaccagtagccactcaagttgagatgtacagctcactggcctggatcgca
atacgagctgctgcacaggtcagtgaatctgtgctggcgatcaacctcctgataggaaag
aagagcaccaggaccgacaaagtcaataacataacattgccaaacattccagagtttgcc
gccgcggaccttctgtcttcatatacagattatttactcgacaactaccaggttgttttc
cagacttccgtttcattcgcgtgccaaaatgaggatgtgtatgactgtatagacggtaga
aagaggaatctctccaaagtggacattacgtggatccttctcattcgctactatatccac
cttcaaaggatcaacaacatgagcaagctgctagcatctgcaactccggactcagggatt
tctttgcctgatgacacaatcatcacatccctgtacaactctgagctgattttgcgccaa
aaagaagtgcacattttcctgaaaaacttcttacagctctacgcttcttcctgcattgat
gggtttccaaaggaacttcttcaaggtttggaaaacacgatttcgctagagaaagttctc
tttgaatcatcagacaaggttcaccaggacagttccctgcagtctgatctatctggaaag
ctcgctggcagcacgtcttatacagacatctcatcggaaatggcggttcaagctttaaac
aaagagctctgctttcagtggtatattcctcccctggacaaacctccgaaggatacggaa
cctatggttttattattatatgcatataacttgaagcccctggtgatttcagatattaaa
gtgcctactggtaacaacctgtacgtcggcacctcctggattccactgaggagagtcatc
caaattcatgagaaactatccagtcttgcacaaatagccgagatatcattaccatcagtt
cctgaagttgcttcacaggaaaatatctatgaatcaatagacatcgaagataaaccaatt
gatacagacttggaaaacataatcctccattgttgctcggaaatagaagctctgttttcc
ctggacaaagacaaaaagcccttgccactgactgaggttccatttgacgtctccctgcct
gctatattcagccttgagagactttttgatctggcgaacggttgtattgtgtctgtagga
agccttttcaactgggtggtgtcaattatttcctga
DBGET
integrated database retrieval system
