Rattus norvegicus (rat): 314964
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Entry
314964 CDS
T01003
Symbol
Phf20l1
Name
(RefSeq) PHD finger protein 20-like protein 1
KO
K18402
PHD finger protein 20
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
314964 (Phf20l1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
314964 (Phf20l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD20L1_u1
PHD_5
Tudor_2
Tudor_3
MBT
PHD
DUF4537
Tudor_4
SH3_Hsr9
SPICE
Motif
Other DBs
NCBI-GeneID:
314964
NCBI-ProteinID:
NP_001258368
RGD:
1560141
Ensembl:
ENSRNOG00000005486
UniProt:
Q4V9H5
A6HRR4
LinkDB
All DBs
Position
7:100219598..100285580
Genome browser
AA seq
1015 aa
AA seq
DB search
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
DSNRLRPLERPSLRKEGLKDEEDLFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA
AAAKNKTGSKPRTSANSNKEKERDGGKWFKVPSKKAETSTCIVTAEIEKKEELPTSSEPF
GLHIDSVPKIVFPQPESTLTNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED
CSATAPVLEQAISPKPQSQKKNEAVISSSANTQKPALLSSTLSSGKARSKKCKHESGESS
GCIKAPKSPLAPELIQAKDLTLVSQLSSVINKTSSPQPVNPPRPCKHSERRRRSQRLATL
PMPDDSLEKLSSSSSATDGKVFSISSQNQQESSVPEVPAIAYVPLQKLGPCLPLDLSCGS
EVTGSQAPDSSYPGGECPREEKEETPLFANPTSKVVSDVKGAAAATGILKTEKKVKLEEK
TSTAFGKRKEKDKERKEKRDKDHYKPKQKKKKKKKKKSKQHDYSDYEDSSLDFLERCSSP
LTRSSGSSLAPRSTFTEKTTTYQYPRAILSVDLSGENLSDVEFLDDSSTESLLLSGDEYN
QDFDSTNFEESQDEDDALNEIVRCICELDEENGFMIQCEECLCWQHSVCMGLLEDSIPEQ
YICYICRDPPGQRWNAKYRYDKEWLNNGRMYGLSFVKENYSHLNAKKIVSTHHLLADVYG
ITEVLHGLQLKIGILKNKHHPDLRLWAYSGKRKDQDQVVAGAERKVILQDTANSEGRKYV
QNHKEPPLKMEETYITSEHSYQKPQSFSQDCHSLTDPGSSDDDDVSSFEEDGELHVADNS
HLLYSVKERGVSEKNPASENKVFVYNDKKGMEGPGDAHLQWQLNLLTHIENVQNEVTSRM
DLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRHIKQLLLDMGKVQQIATLCSV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagcccccaaaccgtcctggaatcacttttgagattggtgctcgtttggag
gcactcgactacttacagaaatggtatccatcacgaattgaaaaaattgattatgaagaa
gggaagatgctagttcattttgagcgctggagtcatcgttatgatgagtggatttattgg
gatagcaacaggttgcgaccccttgaaagaccttcactaagaaaagaagggctaaaggac
gaggaagatctttttgattttaaagctggagaagaagttctggctcgttggacagactgt
cgctattaccctgccaagattgaagcaataaacaaagaaggaacattcacagttcagttt
tatgatggcgtaatccgttgtttgaaaagaatgcacattaaagccatgcctgaggatgct
aaggggcaggtgaaatcccagcatccactaagctggtgttgtcctatcgacccagctgga
tcgtgtaaccagtctatgggaagtgaggactggattgctttagtcaaagcagctgctgca
gctgcagcgaagaataaaacagggtctaaacctcgaaccagtgctaacagcaataaagag
aaagagagagatgggggaaaatggttcaaagtaccttcaaagaaggcagagacttccaca
tgtatagtcacagcagagattgagaagaaggaagagctacccacatctagtgaaccgttt
ggacttcacatagacagcgttccaaagatcgtctttccacagccagagagcacattaaca
aacaagaggaaaaataatcaaggcaactcatttcaggcaaagagagcccgacttaacaag
attactggcttgttggcatccaaggcagttggggtggatggtgctgaaaaaaaagaagac
tgcagtgcaacagctccagtcctggagcaggcgatttcacctaaacctcaaagtcagaaa
aaaaatgaagctgtcattagcagttctgccaacactcagaaacctgcactgttatcctca
actttgtcttcagggaaggctcgcagcaagaaatgcaaacatgaatctggagagtcttct
gggtgtataaaagcccctaagtcaccacttgccccagaattaatacaagccaaggatttg
acgcttgtatctcagctttcttcagtgataaataaaactagttctccacagcctgtgaat
ccccctagaccttgcaagcatagtgagagaagaagaagatctcagcgcttagccacctta
cccatgcctgatgattctctagaaaagctttcttcttcctcttcagcaactgatgggaaa
gtattctccatcagttctcagaatcagcaagagtcttcagtaccagaagtgcctgctatt
gcatatgtgccgctccagaagctgggaccctgtctccctcttgatttaagttgtggttca
gaagtcacaggaagtcaagccccagattcctcttaccctggtggtgaatgtcccagggaa
gaaaaggaggagacaccattgtttgcaaatcccacctccaaagtagtgagtgatgtaaaa
ggagctgcagcagctacaggaatattgaaaacagaaaaaaaagtgaaattggaagaaaaa
acctccactgcatttggtaaaaggaaagaaaaggataaggagagaaaagagaagcgagac
aaagatcactacaaaccaaagcagaagaaaaagaagaagaagaagaaaaaatctaaacag
cacgactattcggactacgaagacagttcccttgactttttggaaaggtgttcttctcca
ctaactagatcttctgggagttctctggctccacgaagcacatttacggagaaaactaca
acctatcagtacccaagggcaattctgtctgttgatcttagtggtgaaaacttgtcagat
gtggaattcctggatgactcttccacagagagcctgcttctgagtggggatgagtacaac
caagactttgattcaactaattttgaggagtctcaggatgaagatgatgctcttaatgag
attgtacggtgtatctgtgaactggatgaagagaatggcttcatgatccagtgtgaagag
tgcctatgctggcagcacagtgtgtgcatggggcttctggaggacagcattccggagcag
tacatctgctacatctgtcgggaccctccgggtcagagatggaatgcaaaatatcgttat
gataaggaatggttgaataacggaagaatgtatgggttatcttttgtaaaagaaaattat
tctcatctcaatgccaaaaaaatagtttccacacaccatcttcttgctgatgtctatggt
ataactgaagtactgcatggattgcagctcaagattggaatactaaagaataaacatcat
cctgaccttcgtctctgggcatattctgggaagaggaaagatcaagatcaggtagtagct
ggagctgagagaaaagtaatacttcaggacacagctaactcagaaggaaggaaatatgta
caaaaccacaaagaaccacccctgaaaatggaagaaacttacataacaagtgaacacagc
tatcaaaagccacagagctttagtcaggactgccattctctcacagaccctggaagctca
gatgatgatgatgttagcagttttgaagaagatggggaactccatgtggcagataatagc
catcttctgtactcagtgaaagagcgtggagtgtcagagaagaatccagcttcagagaat
aaagtgtttgtttataatgataaaaagggcatggagggcccaggagacgcacatcttcag
tggcagctcaatctcctcacacatatagaaaatgtgcagaatgaagtcaccagcaggatg
gacctcatagaaaaagaagtggacgttctggagagctggcttgatttcacaggggaattg
gagccaccagatcccctggcaagactaccccaacttaagcgccacataaaacaactctta
cttgacatgggcaaagtacaacaaattgcaactctttgctctgtataa
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