Rattus norvegicus (rat): 315059
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Entry
315059 CDS
T01003
Symbol
Trappc9
Name
(RefSeq) trafficking protein particle complex subunit 9
KO
K20306
trafficking protein particle complex subunit 9
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
315059 (Trappc9)
Membrane trafficking [BR:
rno04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
315059 (Trappc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
PMBR
Motif
Other DBs
NCBI-GeneID:
315059
NCBI-ProteinID:
NP_001029328
RGD:
1309461
Ensembl:
ENSRNOG00000027569
UniProt:
E9PU02
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All DBs
Position
7:complement(106410339..106887364)
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AA seq
1139 aa
AA seq
DB search
MSVPDYMQCAEDHQTLLVVVQAVGIVSEENFFRIYKRICSVSQLSVRDSQRALFIRYRHH
YPPENNEWGDFQTHRKVVGLITITDCFSPKDWPQTFEKFHVQKEIYGSTLYDSRLFVFGL
QGDVAEQPRPDVAFYPNYDDCDSVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMSVELLRSVNDFL
WLGAALEGLCSASVIYHYPGGTGGKTGARRLPGNSLPSEAANRHRPGALTTNGINPDTST
EIGRAKNCLSPEDIIDKYKEAISYYSKYKNAGVIELEACVKAVRVLAIQKRGMEASEFLQ
NAVYINLRQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPSIAEPGWRACY
KLLLETLPGYSLSLDPKDFNKGTHRGWAAVQMRLLHELVYASRRMGNPALSVRHLSFLLQ
TMLDFLSDQEKKDVTQSLENYTAKCPGTMEPITLPDGLTLPPVPFTKLPIVRCVKLLSLP
TSLRPQKVKSLLGQSMSTKSPFIYSPIIAHNRGEERNKKIDFQWVQGDVCEVQLMVYNPM
PFELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPQTTGMITVNGYHTTVFGV
FSDCLLDNLPGLKTSGSTVEVIPALPRLQISTSLPRSAHSLQPSAGDEIATNVSVQLFNG
ETQQLAITLENIGLEPLEQLEVTSKLLTTKEKLYGDFLSWKLEETLAQFPLQPGKVATFT
INIKAKLDFSCQENLLQDLSDDGISVSGFPLSSPFRQVVRPRVESRPTNPSEGSKTGDLG
HVKTLEAILNFKYSGGPGHVEGYYRNLSLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLD
VFNSTEHELTVCARNNSELVLHASECQRMAIQVDKFNFESVPESPGEKGHFANLKQLEEE
RQEARGLEISSKLDIRWRIPSLKRSGEASVEGLLNQLILEHLQLAPLQWDVLVDGQPCDC
EVAAACQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDVISFVGSSTF
YLDTVQPSGQSACLGALLFLYTGDFFLNIRFHEDCKSKELPPSWFCLPSVHVRALEAQA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcctgactacatgcagtgcgcagaggaccaccagaccctcctggtggtcgtt
caggccgtgggcatcgtctctgaggagaacttcttcaggatctacaagcggatctgctcg
gtgagccagctcagtgtgcgcgactcacagcgtgcactcttcatccgttaccggcaccac
tacccgccggagaacaacgagtggggcgacttccagacgcaccgcaaggttgtgggcctc
attaccatcaccgactgcttctcgcccaaagactggccacagactttcgagaagttccac
gtgcagaaggagatctacggctccacgctctacgattcccgcctctttgtgtttgggctg
cagggtgatgtggctgagcagccccgcccggatgtggccttctatcccaactatgatgac
tgtgattcagtggagaagcgcatcgaagacttcatcgagtcccttttcattgtgttggag
tccaagcgcctggacagagccacggacaagtccggggacaagatccctcttctctgtgtc
cccttcgagaaaaaggacttcgtgggactagacacggatagcagacactataagaagcgg
tgccaaggacgcatgcggaagcacgttggggacttgtgcctccaggctgggatgctgcag
gacgccctggtacactaccacatgtccgtggagctcctgcgctcagtgaatgacttcctg
tggttaggggctgccctggaagggctgtgttctgcttccgtcatctaccattatcctgga
ggaactggcggcaagaccggggctcggagactcccaggcaactcacttccctcagaagca
gccaaccgacaccggccaggtgctctcaccactaacggcataaatcctgacaccagcacg
gagatcggaagggctaagaactgcctcagccccgaggacataattgacaaatacaaagag
gccatctcctattacagcaagtataagaatgccggagtgattgagctggaagcgtgtgtc
aaggccgtgcgtgtcctggctattcagaagcgtggcatggaagcttcggagtttcttcag
aatgccgtgtacatcaatctccggcagctttctgaagaagagaaaatccagcgctacagc
atcctgtccgagctctacgagctgattggcttccaccgcaagtcagcattcttcaagcgc
gtggctgccatgcaatgcgtggccccaagcatcgcagaacctggctggagggcctgttac
aagctccttttggagacattgcctggctacagtctgtcactagaccccaaggacttcaac
aaaggtacacacagaggctgggctgccgttcagatgcgtctgctgcatgagttggtctat
gcctcccgcaggatgggaaatcccgcactctctgtgcggcacctatccttccttttgcag
accatgctggatttcctgtctgaccaggaaaagaaagatgtgactcaaagcctggagaac
tataccgccaagtgtcccgggacgatggagcccatcaccctcccggatggcctcacgctg
cctcctgtgccctttactaagctgcccattgtcaggtgcgtgaagctgctgagtctcccc
accagcctccggccgcagaaggtgaaaagcttgctggggcagagcatgtccaccaagagt
cccttcatctattccccaatcatcgcacacaaccgtggagaagaacgcaacaagaaaata
gatttccagtgggttcaaggagacgtgtgtgaagtccagctgatggtgtacaacccgatg
ccgtttgagctccgcgtggaaaacatggggcttctcaccagcggagtggagttcgagtct
cttcctgcagcactctcccttcctgcggaatctggtttgtacccggtgacactggtcggg
gtcccacagactacagggatgatcactgtgaatggctaccacaccacagtctttggggtc
ttcagcgactgtcttctggacaacctcccaggactgaaaacgagcggctccaccgtggaa
gtcatccctgccttgccaagactgcagatcagcacatcgttgcccaggtctgcacactca
ctgcagccttctgccggggatgagatagccactaatgtgtctgttcagcttttcaatggg
gagactcaacagctcgccattaccttggagaacattggactggagcctctggagcagctg
gaggtcacctcaaagcttctcaccactaaggagaagttgtacggcgacttcttgagctgg
aaactggaagaaacgctggcccagttccctctgcagcccgggaaggtggctactttcacc
atcaacatcaaggcaaagctggacttctcttgccaggagaacctccttcaggatctgagt
gatgatggaatcagtgtgagcggctttcccctgtccagtcctttccgccaggttgtccgg
ccccgagtggagagcagacccacaaacccttccgagggcagcaagacgggggaccttggc
cacgtcaagactctggaagctatcctgaacttcaagtactctggaggcccaggccacgtg
gaagggtattacaggaacctctctctgggattacatgtggaagttgaaccctctgtgttt
tttaccagagtcagcacacttccagcaaccagcacccggcagtgccacttgctcctcgat
gtcttcaactccacagagcacgagctgacagtctgcgccagaaacaactctgaacttgtc
ctacatgccagtgagtgccagcgaatggctattcaagtggacaagttcaactttgaaagt
gtcccagaatcccccggtgagaagggacactttgcaaatctgaaacagctggaagaagag
agacaagaggcacgaggcctggagatcagcagcaagctggacatccgctggagaatcccg
tctctgaagcgcagtggtgaggcgagcgtggagggcctcctgaaccagctcatcctggaa
cacctgcagctggcacctctgcagtgggatgtgctggtggatgggcagccgtgtgactgt
gaggtggcagctgcctgccaggtcggtgaccccgtgcgtttggaggtgcggctgactaac
aggagtcctcgcagcgtggggcccttcgccctcaccgtggtcccattccaggaccaccag
aatggtgtgcacaactatgatctgcatgatgtcatctcctttgtgggttccagcaccttc
taccttgacacggtacagccatcaggccaatcagcctgccttggggccctcctcttcctc
tacacaggtgacttcttcctcaacatccggttccatgaggactgtaaaagcaaggagctg
ccaccgtcctggttttgcttacccagcgtgcatgtgcgtgccctagaggcacaggcctga
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