Rattus norvegicus (rat): 315346
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Entry
315346 CDS
T01003
Symbol
Itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03266
Virion - Herpesvirus
rno04145
Phagosome
rno04151
PI3K-Akt signaling pathway
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno04640
Hematopoietic cell lineage
rno04810
Regulation of actin cytoskeleton
rno04820
Cytoskeleton in muscle cells
rno05100
Bacterial invasion of epithelial cells
rno05133
Pertussis
rno05135
Yersinia infection
rno05165
Human papillomavirus infection
rno05168
Herpes simplex virus 1 infection
rno05205
Proteoglycans in cancer
rno05206
MicroRNAs in cancer
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
315346 (Itga5)
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
315346 (Itga5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
315346 (Itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
315346 (Itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
315346 (Itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
315346 (Itga5)
04810 Regulation of actin cytoskeleton
315346 (Itga5)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
315346 (Itga5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
315346 (Itga5)
05205 Proteoglycans in cancer
315346 (Itga5)
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
315346 (Itga5)
05165 Human papillomavirus infection
315346 (Itga5)
09171 Infectious disease: bacterial
05135 Yersinia infection
315346 (Itga5)
05133 Pertussis
315346 (Itga5)
05100 Bacterial invasion of epithelial cells
315346 (Itga5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
315346 (Itga5)
05412 Arrhythmogenic right ventricular cardiomyopathy
315346 (Itga5)
05414 Dilated cardiomyopathy
315346 (Itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
315346 (Itga5)
04515 Cell adhesion molecules [BR:
rno04515
]
315346 (Itga5)
04090 CD molecules [BR:
rno04090
]
315346 (Itga5)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
315346 (Itga5)
Cell adhesion molecules [BR:
rno04515
]
Integrins
Integrin alpha subunits
315346 (Itga5)
CD molecules [BR:
rno04090
]
Proteins
315346 (Itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
315346
NCBI-ProteinID:
NP_001101588
RGD:
2925
Ensembl:
ENSRNOG00000057451
UniProt:
A6KD08
LinkDB
All DBs
Position
7:complement(136358097..136381305)
Genome browser
AA seq
1099 aa
AA seq
DB search
MPPRQPTRRPGGGPSRELGKLLPALSHSPLGGLGSGSGSVAPGQGRTGAMGSWTPRSPRS
PLHAVLLRWGPRRLPPLLPLLLLLWPPPLQVGGFNLDAEAPAVLSGPPGSLFGFSVEFYR
PGRDGVSVLVGAPKANTSQPGVLQGGAVYVCPWGTSPIQCSTIQFDSKGSRILESSLYSE
EPVEYKSLQWFGATVRAHGSSILACAPLYSWRTEKDPQNDPVGTCYLSTENFTRILEYAP
CRSDFGSAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQISESYYPQYLI
NPVQGQLQTRQASSVYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTVLNGSDI
HSLYNVSGEQMASYFGYAVAATDTNGDGLDDLLVGAPLLMERTADGRPQEVGRVYIYLQH
PEGIEPTPSLTLTGQDEFGRFGSSLTPLGDLDQDGYNDVAIGAPFGGEAQQGVVFIFPGG
PGGLNTKPSQVLQPLWAAGHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKALVYRGRP
IISASASLTIFPSMFNPEERSCSLEGNPVSCINLSFCLNASGKHVPNSIGFEVELQLDWQ
KQKGGVRRALFLASKQATLTQTLLIQNGAREDCREMKIYLRNESEFRDKLSPIHIALNFS
LDPKAPMDSHGLRPVLHYQSKSRIEDKAQILLDCGEDNICVPDLQLAVYGEKKHVYLGDK
NALNLTFLAQNLGEGGAYEAELRVTAPLEAEYSGLVRHPGNFSSLSCDYFAVNQSRQLVC
DLGNPMKAGTSIWGGLRFTVPHLQDTKKTIQFDFQILSKNLNNSQSNMVSFPLSVEAQAQ
VSLNGVSKPEAVIFPVSDWNPQDQPQKEGDLGPAVHHVYELINQGPSSISQGVLEISCPQ
ALEGQQLLYVTKVTGLNNCTSNYTPNSQGLELDPEVSPHHLQRREAPGRSSTTSGTQVLK
CPEAKCFRLRCEFGPLHRQESRSLQLHFRVWAKTFLQQEYQPFSLQCEALYEALKMPYQI
LPRQLPQKKLQVATAVQWTKAEGSNGVPLWIIILAILFGLLLLGLLIYVLYKLGFFKRSL
PYGTAMEKAQLKPPATSDA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcccccccgccagccgacccggcggccggggggagggcccagccgggagttgggcaaa
ctcctccccgcgttgagtcattcgcctctgggaggtttaggaagcggctccgggtcggtg
gccccaggacagggaagaacgggcgctatggggagctggacgccacggtcgccacgatct
cctctccatgcggtgctgctgcgctgggggccccgacgcctaccgccgctgctgccgctg
ctgctgctactgtggccgccaccactccaggttgggggcttcaacctagacgcggaggcc
ccggcggtgctctccgggccccccggctccctctttggcttctccgtggagttttaccgg
ccgggaagggacggagtcagtgtgctggttggggcacccaaggctaacactagccaacca
ggagtactacaaggtggcgctgtctatgtgtgtccctggggcaccagtcctatccagtgc
agcaccattcaatttgacagcaaaggctcccgcatcctggagtcttcattgtatagtgag
gaacctgtggagtacaagtccttgcagtggttcggggcaacggttcgggcccacggctcc
tccatcttggcatgcgctccactgtatagctggcgcacagaaaaggacccacagaatgac
ccagtgggcacctgctacctctccacagaaaacttcacccggattctggagtatgcacct
tgccgctcagattttggcagtgcagcagggcagggttactgccaagggggcttcagtgcc
gagttcaccaagactggccgcgtggtcctaggaggacctgggagctacttctggcaaggc
cagatcctgtcggccactcaagagcagatctcggagtcctattacccacagtacctcatc
aaccctgttcaggggcagctgcagacccgccaggccagctccgtctatgatgacagctac
ttgggatactctgtggctgtaggtgaattcagtggtgatgacacagaagactttgttgct
ggcgtgcccaaaggaaacctcacctatggctatgtcactgtccttaatggctcagacatc
cactccctctacaacgtctcaggagaacagatggcctcctattttggctatgccgtagct
gccactgataccaatggagatgggctagatgacctgctggtaggggcacccctactcatg
gagcggacagctgacgggagacctcaggaggtgggcagggtctacatctatctgcagcac
ccagagggtatagagcctacgccctccctcaccctcactggccaagatgagttcggccga
ttcggcagctccttgacacccctgggggacctggaccaagacggctacaatgatgtcgcc
attggggctccgtttggtggggaggcccagcaaggagttgtatttatattcccgggaggc
ccaggaggactgaacactaagccttcccaggttttgcagcctctgtgggcagctggccat
accccagacttctttggctctgccctccgaggaggacgagatctggacggcaatggatac
cctgatctaatcgttggatcctttggtgtggacaaggctctggtatacaggggtcggccc
atcatatctgccagtgcgtctctcaccatcttcccctccatgttcaacccagaggagcgc
agctgcagcctggaaggaaaccctgtatcctgcatcaaccttagcttctgcctcaacgcc
tctggaaaacatgtacccaactctataggcttcgaggtggaactccaactggactggcag
aagcagaagggaggggtccggagggcactgttcctggcttccaagcaggccacccttacc
cagaccctgcttatccagaatggggctcgggaggactgcagggagatgaagatctacctc
aggaatgaatcagaattcagagacaaactctccccaattcacattgccctcaacttctcc
ttggaccccaaagcccccatggacagccatggcctccggccagtcctacactaccagagc
aagagccggatagaggacaaggcccagatcttgctagactgtggtgaagacaacatctgt
gtgcctgacctgcagctggctgtgtatggggagaagaaacatgtgtacctgggtgacaag
aacgccctgaacctgacattcctcgcccagaatctgggcgagggtggggcctatgaagcc
gagctgcgggtcacagcccccctggaggctgagtactcggggcttgtcagacacccaggg
aacttctccagcctgagctgtgactacttcgcggtgaaccagagccgccagctggtgtgt
gacctgggcaaccccatgaaggcaggcaccagtatctggggtggccttcggttcactgtt
cctcatcttcaagacacaaagaaaaccatccaatttgacttccagatcctcagcaagaac
ctgaacaactcacaaagcaacatggtctccttcccactctcggtggaggctcaagcccaa
gtctcccttaacggtgtctccaagcctgaagccgtgattttcccagtcagcgactggaat
cctcaagaccagcctcagaaggagggagatttgggccctgctgtccaccatgtctatgag
ctcattaaccaggggcccagctccatcagccagggtgtgctggagatcagctgtccccag
gctctggaaggccaacagctcctctatgtgaccaaggtgacgggactcaacaactgcacc
tccaactacacccccaactcacagggcctggagttggatccagaggtttctccacatcac
ctgcagaggcgagaggctccagggaggagttctaccacctcaggaacacaagtcctgaaa
tgccctgaagccaagtgtttcaggctgcgctgtgagtttgggccactgcatcgccaagag
agccggagtctgcagctgcatttccgagtctgggccaagaccttcttgcagcaggaatac
cagccgttcagccttcagtgtgaggctctatatgaagccctgaagatgccctaccaaatc
ctgcctcggcagctgccccaaaagaaactccaggtggccacagccgtgcagtggaccaag
gcagaaggcagcaatggcgtcccactgtggatcatcatcctcgccatcctttttggcctc
ctgctcctaggtctgctcatctatgtcctctacaagctcggcttcttcaaacgctccctc
ccctacggcacagccatggaaaaagctcagctcaagcctccagccacctcagatgcctga
DBGET
integrated database retrieval system
