Rattus norvegicus (rat): 315508
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Entry
315508 CDS
T01003
Symbol
Ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
315508 (Ncapd3)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
315508 (Ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
HEAT_2
CLASP_N
HEAT_EF3_N
HEAT_GCN1_C
DUF3013
Motif
Other DBs
NCBI-GeneID:
315508
NCBI-ProteinID:
NP_001029172
RGD:
1562176
Ensembl:
ENSRNOG00000008932
UniProt:
Q3T1H0
LinkDB
All DBs
Position
8:33696214..33765520
Genome browser
AA seq
1494 aa
AA seq
DB search
MALKDLGRDLQPWCPLDLSLEWVNTVWDLDFTETEPLDPSVVAEILETGRDAFTKLYGSL
FPFATDESGSLESVWSFFTENSISSNTLVALFCHFVQEAHKKSASVQYREYGLRAAGLYF
LLLEIPGSVVNQVFHPVMFDKCIQILKKSWPQESNLTQKRKKEHSKSSKANYRRSRKRGK
PPRKEDYQVDELSREEEEEEEEEIYFSVRDLSQIRDAIFNLLKNFLRLLPKFSLKEKPQS
IQTCIEVFVALTSFEPIPHKFLISQARNLSEVKHISELAYYGLYLLCSPVHGEGNKVIGS
IFHQMLNVILMLEVGEGSRCAPLAITSHVINCRNQAVQFVSSLVDELQESVFPILGTLLQ
HICAKVVDKAEYRTYAAQSLVQLLSKLPSKEYATFIAWLYKYSRSSKIPHRVFTLDVALA
LLELPERLLDDTVLLEHQKFLKHKFFVQEIIFDRCLDKAPTVRSKALSSFAQCLELSTSN
TSENTLEIFINSTVTGIHSHFGTSLRPSTVLTSQSCRSVQSSTHDSDEQTPPGERRFMTM
LRKRTKDEKINVRKSALQVLMSILKHCDILSMEEDLLILQDHCRDPAISVRKQALQSLTE
LVMAKPTCVPVQKAWLMGVIPVVMDYESTVQEKALECLDQLLLQNIKHHRKFHSEDRSQV
LAWALLALLTVESQDLSRYLNKAFHIWSKKDKFSSTFINSVISHTDTERSAPAWMLLSKI
TCSSPKLDYTKIMESWEKLSREQSPNSNTLGYMLCVIGHIAKHLPKSTQDKITGVIKAKL
NGFQWSLELISLSVDTLQGLCRASAKTLREEQELLKRVCGDVLSTCEQHLSNILLKEDGT
GNMDEDLVVKCIFTLGDIAQLCPALVEKRVFLLIQSILASSAHADHLPSSQGTTDLASQL
PFQARSSALPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNNVIIVMC
DLCIRYTVMVDNYIPNISICLKDSDPFIRKQTLILLTNLLQEEYVKWKGSLFFRFVSTLV
DSHPDIASLGEFCLAHLLLKRNPTMFFQHFIECIFHFNSYEKHGQYNKFSQSERGKPLFL
LKGKTNKEKRMRIYKFLLEHFTDEQRFNVTSKICLNILACFTDGVLPVDMEASELLSDTF
DILSSKEIKLLAMRAQASKELLEEDDVALANVVMQEAQMKIISQVQKRNFIENIIPIIIS
LKTVLEKNKIPALRELMNYLREVMQDYRDEIKDFFAVDRQLASELEYDMKKYTEQLAQEQ
ALTEHANATNVPADGDRVPSQQVAPDLQAVPGAAAAAGAGQADANMPLPLAQSQPSAPGS
SFTPTLPPICEKGPLKIMSSTRPMSLSTIAILNSVKKAVASKSRTRSLGALSFNMENGSP
ENPSSRASSLSLEQESERAVKRVTKRAISTPEKSISNVTFGAGVSYIGTPATSFFTKEKP
EEAQEEGNDILCLSLLDKRPPQSPQWNVKSPARSQDNPRSGRRSLRKAPLKTAN
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaaggatctaggaagagacctgcagccttggtgtccgctggatctcagcctt
gaatgggtgaacacagtgtgggacctggacttcacggagaccgaacctttggatcccagc
gtggtagcagagatcctagagactggaagagatgcgttcacaaagctctatgggagcctc
ttcccctttgcaaccgacgaaagtggctctttagagagcgtctggtccttcttcactgag
aacagcatttccagcaacactctggtggcgttgttctgtcactttgtccaggaagcccat
aaaaaaagtgccagtgtgcaatatcgagaatatggccttcgtgctgcggggctctatttc
ctgctgctagaaataccaggcagcgtagtcaatcaagtattccacccagtgatgttcgac
aagtgtattcagatcctgaagaagagctggcctcaagaatccaacttgactcagaagaga
aaaaaggaacactccaagagttctaaggctaattacaggaggagcagaaaaagaggaaaa
ccacctaggaaagaggattatcaggtggatgaactttcaagagaggaagaggaggaggag
gaagaggagatttatttttctgtccgggacctttctcaaatacgagatgccatatttaat
cttctaaagaattttttaaggcttctgcccaagttttctcttaaagaaaagccgcagtct
attcaaacatgtatagaggtgtttgttgcattaactagttttgaaccaattcctcataaa
tttcttatttcacaagccaggaacctcagtgaagtaaaacacatttcagagctggcctac
tatggattgtacttgctgtgctccccagttcatggagaaggaaataaggttatcggttct
atttttcatcaaatgctcaatgtgatactgatgttagaggtaggagaagggtcccgctgt
gctcctcttgccataacctcacacgtcatcaattgtagaaaccaagcagtccagtttgtc
agctcacttgtggatgaactacaagaaagtgtgttccccatccttggtactttactgcag
cacatctgtgccaaggtggtggataaagcagaatatcggacctacgcagcacagtccctg
gtccagctgcttagcaaacttccctccaaggaatatgctacattcattgcctggctttac
aaatattcacgaagttccaagatcccacaccgggtcttcactcttgatgttgctttagct
ctgttagagctgcccgaaagactgctggatgacactgtgctactggagcatcagaagttt
ctaaagcataaattctttgtgcaagaaattatatttgatcgttgcttagataaggcacct
actgtccgcagcaaggcgctgtccagctttgcacagtgtttggagttgtctactagcaac
acatctgagaacacactggaaatcttcattaacagtactgtgacaggaatacacagtcac
tttggcacctcactgagaccctcgacagtgttaaccagccaaagttgccgctcagtacaa
agcagcacccatgacagtgatgaacagactccgcctggagagagacgcttcatgacaatg
ctgagaaaaagaaccaaagatgagaagatcaacgttaggaagtctgcactccaggtgtta
atgagtattttgaaacactgtgacatcttgagcatggaggaggacctgttgatcctgcag
gaccactgtcgagaccctgccatatctgtgcggaagcaagccctacagtctcttacagaa
cttgtcatggccaagcctacttgtgtcccagtgcagaaggcctggctgatgggtgtcatc
cctgtggtgatggactatgagagcacagtgcaagagaaggccttggagtgcctggaccag
ctcctgctgcagaacattaagcaccataggaagtttcacagcgaggacaggagtcaggtg
ctcgcctgggccctacttgctctcctcaccgtagaaagccaagatctgagccgctattta
aataaggcttttcatatctggtccaagaaagataaattctcatccacttttataaacagt
gtgatatcccacactgacacagaacgttctgcgccagcctggatgctgctctccaagatc
acttgctcgtcacccaagctggactataccaaaataatggagtcgtgggagaaactcagc
agagaacaatctcccaactcaaacaccttaggctacatgctgtgtgtcattgggcatatt
gcaaagcatcttccaaagagcacacaggacaagataactggtgtgatcaaggccaagctg
aatggatttcagtggtctctagagctgatcagtttgtccgttgacacattacaagggctt
tgcagagcatctgcaaagacactgcgggaagagcaggaactgctgaagcgggtgtgtggg
gatgtcctctccacctgtgagcaacacctctctaacatccttctgaaggaagacgggaca
gggaacatggatgaagacctggtggtgaaatgcatttttaccctaggagatatagcccag
ttatgtccagccctagtagagaagcgagtcttccttctaatccagtctattctggcttct
tctgctcatgcggatcacttgccatcatctcaagggaccacagacctcgccagtcagctg
cctttccaggccaggagctctgccctgccgtctgtgattagagcacatgccatcatcact
ctgggtaaactctgcttacagcatgaagaccttgcaaagaaaagcatcccagcccttgtg
cgagaacttgaagtctgtgaggatgtggctgtccgcaacaatgtcatcattgtgatgtgt
gatctttgtatccggtacactgtcatggtggacaattatattcccaatatttccatttgc
ctgaaggattcagacccgttcatccgaaagcagacactgatcttgcttaccaacctctta
caggaggaatatgtgaagtggaagggctctctgttcttccgatttgtcagcactctggta
gactcacacccagacattgccagccttggggagttctgcctggctcacttgttgctgaag
aggaaccctaccatgtttttccagcacttcattgagtgcatattccacttcaacagctat
gagaagcatgggcagtataacaagttttcccagtcggagagggggaagccactgtttttg
ctaaagggaaagacaaacaaggagaagcgaatgagaatctacaagtttcttcttgagcac
ttcacagatgagcagcgattcaatgtcacttccaagatctgtcttaacattttggcgtgc
ttcacggatggcgtcctgcccgtggacatggaagccagcgagctgctctccgataccttt
gacatcctcagctctaaggagatcaaactattggcaatgagagcgcaggcatccaaggag
ctcctggaggaagatgacgtggctctggcgaatgtggtcatgcaggaggcccagatgaag
attatctcgcaggttcaaaagaggaatttcatagagaatattattccaatcatcatctcc
ctgaagactgtgctggagaaaaataagatccctgctttaagggaactcatgaactacctc
agggaagtaatgcaggattaccgcgatgagatcaaagacttctttgcagtggacagacag
ctggcgtctgagcttgagtatgacatgaagaagtacactgaacaactggcccaggagcaa
gctctgacggagcatgctaatgccaccaacgtgcctgcagacggggacagggtcccctcc
cagcaggttgctccagacttacaagctgtacctggcgctgctgccgccgctggtgctggc
caggccgatgctaacatgcctctgcctctggcccagagccagccttcagcacctgggtcc
agcttcacaccaactttgcctcctatatgcgaaaagggacctctgaagataatgtccagt
accaggcccatgtctctgagtaccatcgcaatcctgaattcagtcaagaaagctgttgcg
tctaagagcaggacacgcagtttaggagccctgtctttcaacatggagaacggaagccca
gaaaatccctccagccgtgcgtcttccttgagcttggagcaggagtctgagagagccgtc
aagcgtgtgactaaaagggcgatcagcaccccagagaagtccatcagcaatgtcacattt
ggagcaggggtcagttacatagggacaccagcaacttcgttttttaccaaagagaaacct
gaagaagcccaggaagaaggaaatgacattttatgtttgtcattgcttgataaaaggcct
ccgcagtctccacagtggaatgtgaagtctccagccaggagccaagacaacccccggtcc
ggcagaaggtcccttcgcaaggccccgctgaagacagccaactga
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