Rattus norvegicus (rat): 315639
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Entry
315639 CDS
T01003
Symbol
Usp28
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
315639 (Usp28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
315639 (Usp28)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
315639 (Usp28)
Peptidases and inhibitors [BR:
rno01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
315639 (Usp28)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
315639 (Usp28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UIM
UBA_4
Motif
Other DBs
NCBI-GeneID:
315639
NCBI-ProteinID:
NP_001101614
RGD:
1311555
Ensembl:
ENSRNOG00000007325
UniProt:
D3ZJ96
A0A0H2UI12
LinkDB
All DBs
Position
8:58222258..58282711
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AA seq
1079 aa
AA seq
DB search
MTAELQQDDAAGAADGHGSSCQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTD
QRVKEPSHDTAATEPSEVEESATSKDLLAKVIDLTHDNKDDLQAAIALSLLESPNIQTDS
RDLNRIHEANSAETKRSKRKRCEVWGENHNPNNWRRVDGWPVGLKNVGNTCWFSAVIQLP
EFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLLGSNRKFVDPSAALDLLKG
AFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRTKSENPMVQLFYGTFLTEGVRE
GKPFCNNETFGQYPLQVNGYHNLDECLEGAMVEGDIALLPSDRSVKYGQERWFTKLPPVL
TFELSRFEFNQSLGQPEKIHNKLEFPQVIYMDRYMYKSKELIRSKRESIRKLKEEIQVLQ
QKLERYVKYGSGPSRFPLPDMLKYVIEFASTKPASESCLSGSVEHMTLPLPSVHCPISDL
TAKESSSPKSCSQNAEGSFSSPEDALPNSEVMNGPFTSPHSSLEMPAPPPAPRTVTDEEM
NFVKTCLQRWRSEIEQDIQDLKNCISSTTQAIEQMYCDPLLRQVPYRLHAVLVHEGQASA
GHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSAYCLMYINDKLPHCSAE
AAHGESDQTAEVEALSVELRQYIQEDNWRFEQEVEEWEEEQSCKIPQMESSPNSSSQDFS
TSQESSAASSHGVRCLSSEHAVIAKEQTAQAIANTAHAYEKSGVEAALSEVMLSPAMQGV
LLAIAKARQTFDRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYFFQNEAP
KRVVERTLLEQFADRNLSYDERSISIMKVAQAKLMEIGPEDMNMEEYKRWHEDYSLFRKV
SVYLLTGLELFQKGKYQEALSYLVYAYQSNAGLLVKGPRRGVKESVIALYRRKCLLELNA
KAASLFETNDDHSVTEGINVMNELIIPCIHLIINNDISKDDLDAIEVMRNHWCSYLGKDI
AENLQLCLGEFLPRLLDPSAEIIVLKEPPTIRPNSPYDLCSRFAAVMESIQGVSTVTVK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagctgcagcaggacgacgcggcgggggcggcggacggccatggctcgagc
tgccagatgctgttaaatcagctgcgagaaatcacgggcatccaggatccttcctttctt
catgaagcattaaaggccagtaatggtgacatcacccaggctgtcagccttctcacagac
caaagagttaaggagcccagtcacgacacagctgctacagaaccatctgaagtagaagag
agtgctaccagcaaagatctcttagcaaaagtgatagaccttacacatgacaacaaagat
gaccttcaggcagccattgccttgagtctcctggagtctcctaacattcagactgacagc
agagatcttaatagaatacatgaagctaactctgcagagactaaacgatcaaagagaaaa
cgctgtgaagtttggggagaaaaccacaatcccaataactggaggagagtggatggttgg
ccagttgggctgaaaaatgttggcaacacatgttggttcagtgctgttattcagttgcct
gaatttcgaagacttgttctcagttacagcctgccacagaacattcttgaaaattgtcga
agtcacactgaaaaaagaaatatcatgtttatgcaagagcttcagtatttatttgctctg
ttattgggatcaaatcggaaatttgtagatccttctgctgccctggatctactgaagggg
gccttccgatcctcagaggagcaacagcaagatgtgagtgaattcacacacaagctcctg
gattggctggaggatgcgttccagctagctgttaatgttaacagcaatcccaggactaaa
tctgaaaaccccatggtgcagctgttctacggtaccttcctgacagaaggggtccgagaa
ggaaaacccttttgtaacaacgagaccttcggccagtaccctcttcaggtaaacggttac
cacaacttagacgagtgtttggaaggggccatggtggaaggtgacattgcgctgcttcct
tctgatcgctcagtgaaatacggacaagagcgttggtttacaaagctgcctccagtgttg
accttcgaactctccagatttgagtttaatcagtctcttgggcagcctgagaaaattcat
aataagctggaatttcctcaggttatttatatggataggtacatgtacaaaagcaaagag
cttatccgaagtaagagagagagcattcgaaagttgaaggaggaaatacaagttctgcag
cagaaattagaaaggtatgtgaagtacggctccggtccatctcgcttcccactccccgac
atgttgaaatacgttattgaatttgccagtacaaaacctgcctctgaaagctgtctgtct
ggaagtgttgagcatatgacgttaccacttccttctgtgcactgcccgatttctgacctc
acagccaaggaaagttcaagtcccaaaagctgctctcagaatgctgagggttccttttcc
tctccggaagatgctctacccaactctgaggtaatgaatgggccatttacttctcctcac
tcttccctggaaatgcctgcacccccaccagctcctcggacagtcacagatgaggaaatg
aatttcgttaagacctgtcttcagaggtggcggagtgaaattgaacaggatatacaagac
ttaaagaattgtatctcgagcaccacccaggctattgagcagatgtactgtgatcctctt
cttcgtcaggtgccttatcgcttacatgcagttcttgttcatgaaggacaagccagtgca
gggcactactgggcgtacatctataaccagccccggcagatctggctcaaatacaacgac
atctctgtcactgagtcttcctgggaagaacttgaaagagattcttacgggggcctgaga
aatgtcagcgcatactgcttgatgtatatcaatgacaagttgccccactgcagtgcagag
gcagcgcatggtgaatctgatcagactgcagaagtggaagccctgtctgtggaactcagg
cagtacattcaggaagataactggaggtttgagcaagaggtggaggaatgggaggaagaa
cagtcctgtaagatcccacagatggagtcctccccaaactcttcctcacaggatttttcc
acatcacaagagtcttcagcagcgtcctcgcatggcgttcgatgtttgtcttctgaacat
gctgtgattgcaaaggagcagactgcccaggccatcgcaaacacggctcatgcctatgag
aagagcggggtagaagcagccttgagtgaggtgatgctgagccctgccatgcaaggggtc
ctcctggccatagctaaggcgcgccagacctttgaccgagacgggtctgaagcagggctt
attaaggcatttcatgaagagtactccaggctctatcagcttgccaaagagacacccacc
tctcacagtgatcctcgccttcagcatgttctcgtctactttttccaaaatgaagcaccc
aagagggtagtagaacgaacccttctggaacagtttgcagatagaaaccttagctatgat
gagagatctatcagtatcatgaaggtggctcaggccaaactgatggaaattggtccagag
gacatgaacatggaagagtataagaggtggcatgaagactatagtctgttccgaaaggtg
tctgtgtacctgctaacgggcctggaactcttccaaaaaggaaagtaccaggaagctttg
tcctacctggtgtacgcgtaccagagcaatgctggcctgctggtgaaggggccccgcagg
ggcgtgaaggagtctgtgattgctttgtaccgcagaaaatgccttctggagttgaatgcc
aaggctgcttctctttttgaaacaaatgacgaccattctgtaacagagggcattaatgtg
atgaatgagctgatcattccctgcatccacctgatcattaataatgacatttccaaggac
gaccttgatgccatcgaggtcatgaggaaccactggtgctcttacctggggaaggacatc
gcagaaaatctgcagctgtgtttaggggagttcctacccaggcttctagatccttccgca
gaaatcatcgtcctaaaggagcctccaactattcgaccgaattctccctatgatctttgc
agccggtttgcagctgtcatggagtccattcaaggagtttcaacagtaacagtgaagtaa
DBGET
integrated database retrieval system