Rattus norvegicus (rat): 315988
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Entry
315988 CDS
T01003
Symbol
Rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
315988 (Rbm15b)
03041 Spliceosome [BR:
rno03041
]
315988 (Rbm15b)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
315988 (Rbm15b)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
315988 (Rbm15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
315988
NCBI-ProteinID:
NP_001386249
RGD:
1305937
Ensembl:
ENSRNOG00000014161
LinkDB
All DBs
Position
8:complement(116422309..116425374)
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AA seq
887 aa
AA seq
DB search
MKRQNERDSSPSGRGSSSSAKRPREREREAEAGGRRAAHKASGGTKHPVPARARDKPRGS
GGGGGHRDGRAAGDANHRASSGRSSGAPGGGGRTGKASGDPGAGGASPRASPLPPPPPPP
GAEPAGPGTTAAPEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVA
YVNFRHPQDAREARQHALARQLLLYDRPLKVEPVYLRGGGSSRRSSSSSAAASTPPPGPP
TPADPLGYLPLHGGYQYKQRSLSPVAAPPLREPRARHAAAAFALDAAAAAAVGLSRERAL
DYYGLYDDRGRPYSYQAVCEEDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIE
EVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMSGRVIGRNPIKIGYGKANPTTRLWVGG
LGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRR
LRVDFAKAEETRYPQQYQPSPLPVHYELLTDGYTRHRNLDADLRVRDRTPPHLLYSDRDR
TFLEGDWTSLSKSSDRRNSLEGYSRSVRSRSGERWGADGDRSIAKPWEERRKRRSLSSDR
GRTTHSPYEERSRTKGGGQQSERGSDRTPERSRKENHSSEGTKESGSNSLSNSRHSAEER
SHHHHHHEAPDSSHGKKTRESERNHRTTEAEPKTLEEPKHETKKLKTLSEYAQTLQLGWN
GLLVLKNSCFPTSMHILEGDQGVISGLLKDHTSGSKLTQLKIAQRLRLDQPKLDEVTRRI
KQGSPNGYAVLLAIQSTPSGPGAEGMPMVEPGLQRRLLRNLVSYLKQKQAAGVISLPVGG
SKGRDSTGMLYAFPPCDFSQQYLQSALRTLGKLEEEHMVIVIVRDAA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcagaacgagcgagactccagcccgagcgggcgtggctcgtcatcgtccgcc
aagcggccgcgggagcgcgaacgggaggcagaggcgggcgggcggcgagcagcgcacaag
gcctccggcggcaccaagcacccggttccagcgcgggctcgtgacaagccccgcggcagt
ggcggaggcggcggacatcgcgacgggcgcgctgctggggatgcgaatcaccgagcaagc
agcgggcgctcctcaggcgcgcccggaggcggaggacgcaccggcaaggcctccggggac
ccgggtgctgggggcgcgtcgccccgcgcatctccactcccgccgcccccgccgcccccc
ggggcggaacctgcgggtcccggtaccacggcggctccggagtacaagacgctcctcatc
agcagcctgagccccgcgctgccggccgagcacttggaggaccggctcttccaccagttc
aagcggttcggtgagatcagcctgcgcctgtcacacacaccggagctgggccgcgtggcc
tatgtgaacttccggcacccacaggacgcgcgtgaggcccgccagcacgccttggcccgt
cagctgctgctctacgaccgcccgctcaaggtagagcccgtgtacctgcgcggcggcggg
agcagtcggcgcagtagcagcagcagcgccgctgcctccacgccgcccccagggcctccc
acgcccgcggaccctctgggctatctgcccctgcacgggggctaccagtacaagcagcgc
tctctgtctccggtagccgccccgcccctgcgggagccccgtgcgcggcacgccgcggca
gccttcgccctggatgctgctgccgcggctgccgtgggactgtctcgggagcgagccctg
gactattacgggctgtacgacgaccgcgggcgcccgtacagctaccaggccgtgtgcgag
gaggacctgatgccggaggatgatcagagagccactcgaaatctcttcatcgggaacctg
gaccacagtgtatctgaagtggagcttcgacgggccttcgagaagtatggcatcattgag
gaggtggtcatcaagaggcctgcccgcggccaaggtggtgcctatgccttccttaagttt
cagaacctggacatggcacacagggccaaggtggctatgtctggccgggtgattggcaga
aaccctataaagataggctacggcaaggctaaccctaccacccgcctctgggtgggtggt
cttggacctaacacctcgctggcggccctggccagagaattcgatcgctttgggagcatt
cggaccatcgatcacgtcaaaggagacagctttgcctacatccagtacgagagcctggat
gcagcccaagctgcctgtgctaaaatgaggggctttcccttgggtggtccagatcgcagg
ctccgggtggattttgccaaagcagaggagactcgatatccccagcagtaccagccctca
cctctccctgtgcattatgagctgctcactgatggatatacccggcatcgaaacttggat
gctgaccttagggtgcgggacaggacccctccgcaccttctgtattcagatcgagaccgg
acctttttggaaggggactggaccagccttagtaaaagttcagaccgcagaaacagcctg
gagggctatagccgctcagtgcgaagccggagtggtgagcgctggggggcagatggggac
cggagcatagccaagccctgggaagagagacgaaagcggaggagcctttccagtgaccgc
gggaggacaactcactccccttatgaggaacggagcaggaccaagggtggggggcagcag
tctgagcgaggctcggaccgcacccctgagcgtagccgaaaggagaaccactccagtgaa
gggaccaaggagtcaggcagcaactccctcagcaacagcagacatagtgctgaggaaagg
agccaccatcaccaccaccacgaggctccagactcttcccatgggaaaaagactagagag
agtgaacgcaatcatcggaccactgaggcagagcccaagactcttgaagagccaaaacat
gagaccaaaaagctaaagactctgtcagagtatgcacagacactgcagctgggttggaat
gggctcctagtgctgaaaaacagctgctttccgacttctatgcacatccttgagggggac
cagggggttatcagtggtctcctcaaagaccacacttctggcagcaagctgacccaacta
aagattgcccagcgtcttcgcctggatcagcccaaactggatgaggtcacccgtcgcatc
aagcaggggagccctaacggctatgctgtgctcctagccatccagtcaacccccagcggg
cctggcgctgaggggatgcccatggtggagccaggcctgcagaggcggcttctcaggaac
ctggtctcctacttaaaacagaagcaggctgcaggggtgatcagcttgccggtgggtggg
tctaagggcagagacagcactggcatgctctatgccttcccgccctgcgacttctcacag
cagtacctccagtcagcacttcggacattgggcaagttagaggaagaacacatggtgata
gtcatagtaagagacgccgcctag
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