Rattus norvegicus (rat): 316017
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Entry
316017 CDS
T01003
Symbol
Als2cl
Name
(RefSeq) ALS2 C-terminal-like protein isoform X1
KO
K26227
ALS2 C-terminal-like protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
316017 (Als2cl)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
316017 (Als2cl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
MORN
RhoGEF
Motif
Other DBs
NCBI-GeneID:
316017
NCBI-ProteinID:
XP_038938579
RGD:
1305208
Ensembl:
ENSRNOG00000033921
LinkDB
All DBs
Position
8:119746498..119762824
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AA seq
952 aa
AA seq
DB search
MCSSEETDLLRLEEVFSTTLARTISLILQPLLLADPEPSDPCGKECLRLLQQLHESAQRL
WDVTEQSLLSLRQRLYHPPSMSLEAVLLLNNADYVLQAHMEYIKSYTDCLVVQAFQKVSK
KRSEFWRSQRKALRQLLSSGSSEGSVGTTLCQALRQPLAHHVQKYVLLLLSLRDTLDEHH
PAQQLVMHAVTLFGNLQSFMQQALDQAMATQALWHSLSSRLRDVLCTPTHRLLQDSQDIP
VVVTPLRAERVLLFDDTLVLLQGHNVHTFDLKLVWVDPSQDKCVLHILTPEDEFSFCTRD
PQGQVVWQWKVTQAVCQALCGKKDFPVLGSGREPSVPPECRCLAYTFHREGRLYQATYDG
EWSRAKPHGKGTLKWPDGRNHVGDFYQGLEHGFGICLVPQASEDKFDCYKCHWREGRMCE
YGICEYGTDEVYKGYFQAGVRHGFGVLDSAPQAPQPFRYTGHWERGQRSGYGIEEDRDRG
ERYIGMWQADQRHGPGIVVTQAGVCYQGTFQGDKMAGPGILLCEDDSLYEGTFTRELTLL
GKGKVTFPNGFTLEGSFCSGTDKGLYTQGVLDTTALPPNPSSTRKRQLGLGAFPVESRWQ
GVYSPFRDFLRLGCPGELQEALLGFHVQSSRELRKSQEYLCCERSHPKDCVGSMEDILKE
LLQHRKPKALQQYLRKALSNSRHPLGKLLQTLMLTFQATYSGIGANKHLQAMAQEEVKQH
ARELWAAYRGLLKVALLRQGQTLEEESMETRDLQVHGLLLPLLLPSFYSELFTLYLLLHE
REDGLYSRGIANLSLFPDTKLLEFLDVQKHLWPLKDLRLTSNQRYSLVRDKCFLSATECL
QKIITTVDPREKLEVLEKTYGEIEATVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLGA
EIHLIRDMMDPIHTGGLHDFLLTALESCYEHIQKEDMRLHHLPGHWDARELW
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagctctgaggagacagacctgcttcggctggaggaggtcttctcaaccactctt
gctcgaaccatcagtctcatcctgcagcctctgctcttagctgacccggaaccctcagat
ccctgtggcaaagagtgccttcggcttctgcagcagctgcatgagagtgcccagcggttg
tgggatgtgacagagcagagcctgctttctctgaggcagaggctatatcacccaccttcc
atgagtctggaggccgtcctgttactgaacaatgctgactatgtcctacaggcccacatg
gagtacatcaaatcctatactgactgcctggtggtgcaagcctttcagaaggtctccaag
aaaaggagtgagttctggagaagtcagcgcaaggccctgcggcagctgctgtcctccggg
agctctgagggctccgtgggcaccacgctgtgccaggccctccgccagccactcgcccac
cacgtgcagaaatacgtgctcctccttctgagcctcagggacacccttgacgagcaccac
ccagcccagcagctggtgatgcatgcagttaccctgtttggaaacctgcagtccttcatg
caacaggccttggaccaagccatggccacacaggccctgtggcacagccttagcagccgg
ctgagggatgtgctctgtaccccgactcaccgcctcttacaggacagccaggacatccct
gtggtggtcaccccactgcgggctgagcgcgtgctgctctttgatgatacccttgtcctg
ctgcagggccacaatgtccacactttcgacctgaagttggtgtgggtggaccccagccaa
gacaagtgtgtgctccacatcctcactcctgaagacgagttctccttttgcaccagagac
ccccaaggccaggttgtctggcagtggaaggtgacccaggctgtgtgccaggccctatgt
ggcaagaaggacttccctgtgctgggatcaggccgggagccatctgtacctcccgaatgt
cgctgcctggcctatactttccaccgtgagggcaggctctaccaggctacctatgatggc
gagtggagtcgagccaagccccacggcaagggaaccctgaagtggccagacgggcggaac
cacgttggggatttctaccagggcctggagcatggctttggcatctgcctggtgccccag
gcctctgaggacaagtttgactgttacaagtgtcactggcgggaaggcaggatgtgtgag
tacggcatctgtgagtatggcactgacgaggtgtacaagggctattttcaggccggtgtg
cggcatggatttggcgtcctcgacagcgccccgcaggccccccagcccttcaggtacacg
ggccactgggagagaggccagaggagcggctacggcatcgaggaggacagggacaggggt
gagcgctacattggcatgtggcaggctgaccagcgtcatggccccgggatcgtggtcacc
caggcaggcgtctgctatcagggcacattccaaggagacaagatggctggcccaggcatc
ctgctgtgtgaggatgattctctgtatgaaggtactttcacgagggagctgacgctctta
ggaaagggcaaggtcaccttccccaatggcttcaccttggagggttctttctgcagtggg
acagataaaggactgtacacacagggagtgctggacacaactgccctcccgcccaaccca
agcagtacacgcaagagacagctgggactgggtgccttccctgtggagagccgctggcag
ggagtctacagccccttccgggacttcctgcgtttaggctgtcctggggaactgcaggaa
gccctcctgggcttccacgtgcagagctccagggagctacgcaagtcccaggagtacctg
tgttgtgagaggagccaccccaaggactgtgtgggcagcatggaagatatcctgaaggag
ctgctgcagcaccgaaagcccaaggccctgcagcagtacctcaggaaggctctgagcaat
tcccgacaccccctggggaagttactccaaaccctgatgctgaccttccaggccacgtat
tcgggcataggggccaacaaacacctgcaggcaatggcccaggaggaggtgaagcaacac
gcccgggagctttgggctgcctacagaggtctgctgaaggtcgccttgctgcgccagggc
cagaccctggaagaggagagcatggagacaagggaccttcaggtgcacgggttgctgttg
cccctcctcctacccagcttctactcggagctcttcacattgtatctgcttctccacgag
agagaggacgggctgtacagccggggcatcgccaacctcagcctgttccccgacaccaag
ctcctggagttcctggatgtgcagaagcatctgtggcccctcaaggacctcaggctaaca
agcaatcagagatactctctagtccgggacaagtgtttcctgtcggccactgaatgtctg
cagaagatcatcaccacagtggaccctcgggagaagctggaggtgcttgagaagacctat
ggggaaattgaggccaccgtgtcacgggtgctaggccgggaatacaaactgcccatggat
gacctgttaccactgcttatctacgtggtgtcccgagctcgaattcagcatctgggagct
gagatccacctgatccgagacatgatggaccccatccacacaggtggcctccatgacttc
ctgcttacagctttagagtcctgttatgagcacatccagaaggaagacatgaggctgcac
cacctgcctggccactgggacgcaagagaactctggtga
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