Rattus norvegicus (rat): 316164
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Entry
316164 CDS
T01003
Symbol
Satb1
Name
(RefSeq) DNA-binding protein SATB1
KO
K23225
DNA-binding protein SATB1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
316164 (Satb1)
03036 Chromosome and associated proteins [BR:
rno03036
]
316164 (Satb1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
316164 (Satb1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
316164 (Satb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
316164
NCBI-ProteinID:
NP_001012129
RGD:
1305561
Ensembl:
ENSRNOG00000012942
UniProt:
Q5U2Y2
LinkDB
All DBs
Position
9:complement(4916958..5010359)
Genome browser
AA seq
764 aa
AA seq
DB search
MDHLNETTQGKEHSEMSNNVSDPKGPPAKIARLEQNGSPLGRGRLGSTGGKMQGVPLKHS
GHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSLGY
SHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLEDLP
PEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWY
KHFKKTKDMMVEMDSLSELSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPSVRTPL
PNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQQSLNQQYLNHPPPVSRSMNKP
LEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQ
SLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLLSTPPSRPPQVKTATLA
TERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWLCELLRWKEDPSP
ENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVPAEQLQQQQQQQQ
QQQQQQQPPPPPPQPQPQPQAGPRLPPRQPTVASSAESDEENRQKTRPRTKISVEALGIL
QSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKDNSGLEVDVAEY
KDEELLKDLEESVQDKNANTLFSVKLEEELSVEGSTDINADLKD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttgaacgagacaactcaggggaaagagcattccgaaatgtctaacaatgtg
agtgatccgaagggtccgccggccaagattgcccgcctggagcagaacgggagcccacta
ggaagaggaaggcttgggagcacaggtggaaagatgcagggagtgcctttaaaacactcg
ggccacctcatgaaaaccaaccttaggaaaggaaccatgttacccgttttctgtgtggtg
gaacattatgaaaacgccatcgagtatgattgcaaggaggagcatgcggaatttgtgttg
gtgaggaaggatatgcttttcaaccagctcatagagatggcgttgctgtctctgggctat
tcacacagctctgctgcccaagccaaagggctcatccaggttgggaagtggaatccagtt
ccactgtcgtatgtgacagatgcccctgatgccacagtggcagacatgcttcaggatgtg
taccatgtggtcactctgaaaatccagctgcacagttgccccaaactagaagacttgcct
cctgaacaatggtcccacaccacagtaaggaatgctctgaaggacttactgaaagacatg
aaccagagttcgttggccaaggagtgccccctctcacagagcatgatctcctccatcgtg
aacagcacgtactatgcaaatgtctcagcagcaaaatgtcaagagtttggaaggtggtac
aaacatttcaagaagacaaaggatatgatggttgagatggatagtctgtctgagctatcc
cagcaaggcgccaaccatgtcaattttggccagcagcctgtcccaggaaacacagctgag
cagcctccgtcccctgcacagctctcccacggcagccagccctctgtccggacccctctt
ccgaacctgcaccctgggcttgtgtcaacacctatcagtcctcagctggtcaaccagcag
ctggtgatggcccagttgctgaaccagcagtatgcagtgaacagactcttggcccagcag
tccttaaaccaacagtacttgaaccaccctccccctgtcagtaggtctatgaacaagcct
ttggagcagcaagtttccaccaacaccgaggtctcttccgaaatctaccagtgggtgcgg
gatgaactgaaacgagccggaatctcacaggcagtgtttgcacgagtggcttttaacaga
actcagggattgctttctgaaatcctccgcaaggaagaggaccccaagactgcatcccag
tctctgctggtaaaccttcgggctatgcagaatttcttacagttgccagaagctgaaaga
gaccggatataccaggatgagagggaaaggagcttgaacgcagcctccgccatggggcct
gccccgctgctgagcacgccacccagccgccctcctcaggtgaaaacagctaccctcgcc
actgagaggaatgggaagccagagaacaatactatgaacattaacgcctccatttatgac
gagattcagcaggaaatgaagcgtgctaaagtgtcccaagcactgtttgcaaaggttgct
gccacaaaaagccagggatggctgtgcgagctgctgcgctggaaagaagacccttctcca
gaaaacagaaccctgtgggagaacctgtcaatgatccgaagattcctcagtctgcctcag
cctgagcgcgatgccatctatgagcaggagagcaatgccgtgcatcaccatggcgacagg
cctccccacatcatccatgttccagcggaacagcttcagcagcagcagcagcagcagcag
caacagcagcagcaacagcagccaccgccaccacctccacagccacagccacagccccag
gcaggccccaggctcccaccccggcagcccaccgtggcctcctctgcagagtccgatgag
gaaaaccggcagaagaccaggccacgaaccaaaatttccgtggaagccctgggcatcctt
cagagtttcatccaagatgtcggcctgtacccggatgaagaggccatccagaccctgtcg
gcgcagctggacctcccgaagtacaccatcatcaagttctttcagaaccagcggtactac
cttaagcaccacggcaagctgaaggacaactccggcttggaggtggatgtggctgagtac
aaagatgaggagttgcttaaggatttggaggagagcgtccaggataaaaacgccaacacc
cttttttcggtgaaactagaggaagagctatccgtggaagggagcacagacattaatgcc
gacctgaaagactga
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