Rattus norvegicus (rat): 316254
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Entry
316254 CDS
T01003
Symbol
Tdrd6
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
316254 (Tdrd6)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Gene silencing
piRNA pathway
316254 (Tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SNase
Tudor_2
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
316254
NCBI-ProteinID:
NP_001178512
RGD:
1305956
Ensembl:
ENSRNOG00000025693
UniProt:
D3ZXQ5
LinkDB
All DBs
Position
9:24841259..24856621
Genome browser
AA seq
2136 aa
AA seq
DB search
MSSTPGLPTPGASLALRVSFVDVHPEVIPVQLWGLVGQRREEYVRLSREIQEAAATRGPW
ALGGASASPGELCLVQVGLMWHRCRVVSRQAQDSRVFLLDEGRTITAGAGSLAPGRSEFF
HLPSEVLGCVLAGLVPAGGGGAGGGEPQHWSPNAVDFLSNLQGKEVHGRVLDVLLLHRLV
LLEVPVVSQQMEELGLARHVPDSLFCSLLKRYLTAAGLGSSGAPVLPRAAPKQEHPGLDY
FYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQVYRAPTGTEDEDSGSA
TWEEREESPDKPGSPCASCGLDGQWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRY
LLPEYFRMPVVTYPCALYGLWDCGRGWSRSQVGDLKALILGQAVNAKIEFYCSFEHMYYV
TLYGEDGINLNSAFGVQSCCLADRFLQSQGIEEEEDEDEDEMEAAFQSQSPAEEMEEEVS
LPSLRSIRLKMNTFYDAQVEFVKSPSEFWIRLRKHKNTFSKLTKRMCSFYSSASKLDGVI
LKPEPDDLCCVKWKENGYYRAMVTRLDSKSVDVFLVDRGNSENVDWCDVRMLLPQFRQLP
ILALKCTLADIWPLGKTWSQEAISFFKKTVLHKELVVHILDKQDRQYVIEILDESRTGEE
NISKVIAQAGYAKFQEFETKENIRLSAHSPGHVSGHFIAESSKIPSVKKVEGDQKAKNDN
KTLSDPEALATVSLSNISTGQTAQDKEKVTSDPTLLMLNLLKTKPDCCGKGELEVGSTVE
VKVSHIENPGSFWCQLMRNAQGFRTLMCDIEDYCKSEPSPYEGDTRACLAKRTANGRWSR
ALISGAQSLEHVRVVFVDYGDKDVVSMKDILSVSDVFFKVRAQAFRCSLYNLIQPTGENP
FVWDERAIQAFTGFIDNAWQNNLELKCTIFALASRHEEECFNVVDLLTPFQSACHFLVEK
RLARPVKLQKPLEPSVQLHSYYYSTHDLKIGSEELVYITHADDPWTFYCQLARNTNILEQ
LSYHIMQLSKVLLNLRTSTLVPGTLCLAKYTDGNWYRGIIIEKEPSKVFFVDFGNTYVAS
DHLLPIPRDAYDVLLLPMQAVKCSLSDIPHHIPEEVTAWFQETVLDKSLKALVVAKDPDG
RLIIELYDESVQINASINEKLGLLGYKNRTRRKDKENEIILRETETLQDKAEIMKPSPTD
YLGKSGDSKAHGVEIMGESCKPKLSPACKELKYLQGSGKAHLVTPYQDSMGNKNDGGFLL
TREKREDMFASSPMSATKLESALPERRMGEASGKDLPPKFCEFPQKTIAPGFKTSVYVSH
INDLSDFYIQLIEDETEINRLSERLNDVRTRPQYHTGPPWQSGDVICAVFPEDNLWYRAV
VLEQQHNDLLSVQFIDYGNMSVVHTNRTGRLGPIDAVLPALCLHCSLRGIVVPDIVGTKE
MVAYFSQRTDEAQIRCEFVKFQGTWEVILADEHGIIAEDIINRFPFNGKSQAGLTTQSMK
GDCSKTALKTNMDTSVFLNWYNPKMKLIKAYATVIDGPEYFWCQFADSEKLQYVETEVQN
AAKQLADRKSCTQCPQIGDPCIVRYREDGHYYRALITNICDDHLASVRLVDFGNVEDCVD
TNALWSIPSELLLVPMQAFPCCLSGFTVSGGVCPQEGNDYFYDIVTEDVLEITILEIKRD
VCDIPLAVVELRSKGENINEKMKKYAKTGTPKSGLYSEKHGAERKGGLSSPDLGLKKPSH
KIAQEKTFYMEARASELSERFEKDLNIETRPSKFYERSPRNIFNAFEHSCQGKMGSQRLE
GGMDYHFVDRVKYDDTYLMTGFNPILAHASEPKELLELNSLEVPLSPDDECKEFLELESI
DLQHSPAGEEDKEELGLGSPMAPLSPGCQAGATLEPFMVQLPLDCEAEKQLELELPTPQL
SLEDSISPLSATVSQNMPESRSAEDERKSSCVGSSDDDDDHSASPLPHHGKGGDSPAHDE
MNLSEEEFPQFENRDSAALLAPLFSEEEARGGRKGRSEVPAVELQNTYTLKGFSVGSKCV
VWSSLRNTWSKCEILALAEEGTRVLNLANGVEETVSPENVWNGIPKVDKRPSEAAFQTVG
KDLPFTPSDDTTIEGFFCSVSEEECGGDADSAKLNV
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgactccggggctgcccactccgggggcctcgctggccctgcgggtgtccttc
gtggacgtgcatcccgaggtgatcccggtgcagctgtggggactggtgggtcagcggcgg
gaggagtacgtgaggctgagccgggagatccaggaggcggcagccacgcggggtccctgg
gcgctgggtggggcgtcggcatcgcccggggagttgtgcctggtgcaggtggggctcatg
tggcaccgctgccgcgtggtcagccgccaggcgcaagacagccgcgtcttcctgctggat
gagggccgcaccatcacggcgggcgcgggctcgctggccccagggcgcagcgagttcttc
cacctgccctccgaagtgttgggctgtgtgctagcgggcctggtgcccgcgggtggcggt
ggcgctggcggtggcgaaccccagcactggtcccccaacgctgtggacttccttagcaac
cttcagggtaaggaggtgcacggacgggtcctggacgtgctgctcctccatcgcctggtg
ctgctggaggtgccggttgtgtctcagcagatggaggagctgggtctggcccggcacgtg
cccgacagcctcttctgttcgctgctcaaacgctatctgacggcggccgggttggggagc
tccggagctccagttctcccgcgagccgcgcccaaacaagagcatcctggcttggattac
ttttatccccaactgcagctgggagtgacggagccggtggtggtaacccaagtatgccat
ccccaccgaattcactgccaactccggagtctctcgcaggagatccaccgtctctctgag
agcatggctcaggtataccgggcgcccacggggacagaggatgaggactctggcagtgcc
acctgggaggagagggaggagagtcctgacaagccggggtctccatgtgcttcctgtggc
ttggatggacagtggtatcgggctctcttgcttgagaccttcaggcctcagcgctgtgcc
caggtgcttcacgtcgattacggaaggaaagaactagtaagctgcagcagccttcgctat
ctgctgccggagtatttccgaatgcccgtggtgacctacccttgtgcactgtatggactg
tgggactgcggaagaggctggtcccggtcacaagtaggcgatctgaaagctctgatcctg
ggccaggcagtgaatgcaaagattgaattttactgttcctttgagcacatgtattatgtc
accctgtatggggaagatgggattaatctgaacagtgcgttcggagtgcaatcctgttgc
ctggctgaccgctttcttcagagccaggggatagaggaggaagaggatgaagatgaggat
gaaatggaggcagcgtttcagtctcagtcccccgctgaggaaatggaagaggaagtttcc
ctcccgtccttgagatctatcaggttgaagatgaatactttctatgacgcccaggtggag
ttcgtgaagagcccttccgagttctggattcgccttagaaagcacaagaatacgttcagc
aagctgacgaagagaatgtgcagtttttattcttctgccagtaagctggatggggttatt
ttgaaaccggaaccggatgacctttgctgtgtgaaatggaaagaaaatggctattaccgg
gccatggtcacccgattggacagcaagagtgtagatgtgttcctggtggaccggggcaac
tctgagaacgttgactggtgtgatgtgagaatgttgctgcctcagtttaggcagctacca
atattggctctgaagtgcaccctggctgacatctggcctctggggaaaacttggagccag
gaggcgatttcattttttaaaaagacggtgctacacaaagaattggtggtccacattctc
gataagcaggatcgccagtatgtcatagagattctggatgaatccaggaccggggaggaa
aacattagtaaggtcatcgctcaagctggatatgccaagttccaggaatttgaaaccaaa
gaaaacatcagactcagtgcccactcccccggccatgtttcgggtcattttattgcagag
tctagcaaaataccttctgtcaagaaggtcgaaggagaccagaaagccaagaacgacaat
aaaaccctctctgatccagaagctctggccacggtaagcctttctaacatttccactgga
caaactgcacaggacaaagagaaggtaacatctgacccaacgctcctcatgctgaattta
ctgaaaacaaaaccagactgctgtggtaaaggggaactggaggtaggcagcactgttgaa
gtcaaagtgtctcacattgaaaaccctggctccttctggtgtcagctgatgaggaacgcc
caaggcttcagaactctgatgtgcgacattgaggactattgcaaaagtgagccgtctccc
tatgagggggacacgcgtgcttgtctggcaaagcgaacagccaacgggagatggtccaga
gctctgattagtggggcacaatctttagagcatgttagagtggtgtttgtggactatgga
gataaggatgtggtatctatgaaggacatactctccgtcagtgatgtgttcttcaaggtt
agagctcaggccttccggtgcagtctttataatttaattcaaccaactggtgaaaacccg
tttgtctgggatgaaagggcaatacaggcttttactgggttcatcgacaacgcttggcag
aataacttagaattaaaatgcacaatctttgctttggcatcaaggcatgaggaagagtgc
ttcaatgttgtggacctgctaacaccgtttcagagcgcctgccattttttggtagaaaag
agacttgctaggcccgtaaagcttcagaagcccctggaaccttcagttcagctgcactcg
tactactattccacccatgacctaaaaattggaagtgaagaattggtgtacataacgcac
gccgatgacccctggacattttattgccagcttgcaagaaacacaaacattttagaacaa
ttatcctaccacatcatgcagttaagcaaagtcttactgaatttaaggacatccaccttg
gtccccggaaccttgtgtcttgccaaatacacggatggaaactggtataggggaataata
atagaaaaagaaccaagtaaggtcttttttgttgattttgggaacacgtacgtagcaagt
gaccacctgctccccatcccccgagatgcctatgatgttttacttctacccatgcaagct
gtgaaatgctccttatccgacatccctcatcatatccccgaagaagtcacagcatggttc
caggagaccgttttagataagtcactgaaggctttagtcgtagccaaggacccagatggg
agactgattatagagctctacgacgagagtgtccaaatcaatgccagtattaacgagaag
cttgggctccttggttacaaaaacagaacaagaagaaaagacaaagagaatgaaataata
ctccgtgagaccgagactcttcaagataaagctgagatcatgaagccatcacctacagat
tatttgggtaaatcgggagacagcaaagcacacggtgtagagattatgggggaatcgtgc
aaacccaagctcagcccagcgtgtaaggaactcaaatatttacaaggctcaggaaaggcc
cacctagtcacaccatatcaggactctatgggaaacaaaaatgacggagggtttctatta
acgagggagaagagagaagacatgtttgccagctcacccatgagtgccaccaaactagag
tctgctcttcctgagagaagaatgggagaagccagtggcaaagatctgcctcccaagttt
tgtgaattcccacaaaagacaatagcgcctggttttaagacctctgtgtatgtttcgcat
attaacgacctttcagatttttacatccagctgatagaagatgaaactgagatcaatcgc
ctttcggagagactgaacgatgtcagaacgcggccccagtaccacacaggtccaccatgg
caaagcggagacgtaatatgtgccgttttcccagaggataacttgtggtaccgagcggta
gtcttggaacagcaacacaacgaccttctctctgtacagtttatagattatggcaacatg
tctgtggtccacactaacagaaccggtcggcttggccccattgatgcggtgttacctgcg
ctgtgcctccactgctccctgagggggatagtggtacctgacatcgtaggcactaaggaa
atggtggcctacttttcccaaaggacagacgaggctcagatcagatgtgaatttgttaaa
ttccaaggcacctgggaagtgattctcgcggatgaacatggaatcatagctgaagatata
attaataggtttccgttcaatggaaaatctcaagcggggcttaccacccaatccatgaaa
ggggactgttcgaagactgctctcaaaaccaacatggatacatcagtgtttctcaactgg
tataaccccaaaatgaaactgataaaagcctacgccactgtgatagacgggcccgagtac
ttttggtgccagtttgccgattctgagaagttgcagtacgtagaaacggaggtccaaaat
gctgccaagcagctggcagacaggaaaagctgcacccagtgtccacaaattggagatccg
tgtatcgtgaggtacagagaggatgggcactactatagagccctcatcactaatatctgt
gacgatcacctcgcatcggtcagacttgtggactttgggaatgtggaagattgtgtggac
accaacgcactttggagcatcccttctgaactcctgctggtccccatgcaagcgtttcca
tgctgcctttctggattcactgtttctggcggtgtgtgccctcaggagggaaatgattat
ttctatgacatagtcacagaggatgtgttagaaataacaatattggagattaaaagagat
gtttgcgacatccccttagcagttgtggagctaaggagcaaaggcgagaacattaacgag
aagatgaagaagtatgctaaaacgggcacacccaagagtggcctgtactccgagaagcac
ggcgcagagagaaagggaggccttagcagtcctgatcttggcctcaagaaaccaagccat
aaaatagcacaagagaagacattctacatggaagcccgggcaagtgagctctcggagaga
ttcgaaaaggatttaaacattgaaaccaggccaagcaagttctatgaacgcagcccccgt
aacatcttcaatgcttttgagcactcgtgccagggtaaaatgggttctcagaggctggaa
ggtggcatggattaccacttcgtggacagagtcaagtatgacgatacctacctcatgacg
ggattcaatccgatattggcccatgctagtgaaccaaaggagctactggaactgaattct
ctcgaggtaccactctcccccgatgacgaatgcaaagagttcttagaactggagtccatt
gacttacaacactcccctgctggggaggaagacaaagaggagctaggcctggggtctccg
atggcgcctctgtccccaggctgccaggcgggagccaccctggaaccatttatggtgcag
cttcccctggactgtgaggccgagaagcagctggagctggaactccccaccccccagctg
tctctggaggacagcataagtcctctatccgcaaccgtcagtcagaacatgccggaatcc
aggagtgcggaggatgagaggaagtccagctgcgtgggctcttctgatgacgatgacgac
cacagcgcttccccactcccccaccacgggaaggggggagattccccggcacacgacgaa
atgaacctgtctgaagaggagtttccacaatttgaaaacagagacagcgctgccttattg
gcacccttgttctctgaggaagaagccagaggaggaaggaagggcaggagcgaagtacca
gcagttgagctacagaacacctacactctgaaaggcttctctgttggatcgaaatgtgtc
gtgtggtcgagcctaagaaacacctggtctaagtgtgagattctggcactagcagaagaa
ggaacaagggttttgaaccttgcaaatggtgtggaggagacagtaagccctgagaatgtc
tggaatggtattcccaaggtagataagagaccctctgaggctgcattccaaacagtagga
aaggaccttcccttcacgccatcggatgacaccaccatcgaaggctttttttgttctgtt
tcagaggaggagtgcggaggtgacgcagattcggccaagctgaacgtataa
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integrated database retrieval system
