Rattus norvegicus (rat): 316638
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Entry
316638 CDS
T01003
Symbol
Sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 precursor
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
316638 (Sned1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
316638 (Sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
316638
NCBI-ProteinID:
NP_001400770
RGD:
1566079
Ensembl:
ENSRNOG00000023548
UniProt:
Q5ZQU0
LinkDB
All DBs
Position
9:101221497..101281401
Genome browser
AA seq
1403 aa
AA seq
DB search
MRRGAAWALLLAAALGLGARGVRAAVALADFYPFGTKRGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDAAMLNRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGR
FSFTIFNYESILWTTGTHASSGGDADGLGGIAAQAGFNAGDGHRYFNIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNPSYTCSCL
AGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPAGFQGPTCESAQSPCDNKVCQN
GGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCLNGGSCVDLVGNYSCICVEPFEGP
QCETGSYVVPSPCLSNPCLNGGTCVDADQGYVCECPEGFMGLDCRERILNDCDCRNGGRC
LGANTTICQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISHS
LPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCKETGD
EYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGICEDLGTDFSCHCQPGYTGHRCQAEVDCGQPEEVKHATMRLNGTRMGSVA
LYTCDPGFSLSVLSHMRVCQPQGVWSQPPQCIEVDECQSQPCLHKGSCQDLIAGYQCLCS
PGYEGVHCELETDECQAQPCRNGGSCRDLPGAFICQCPEGFVGTHCETEVDACASSPCQH
GGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGK
DCTKELLPPTALRVERVEESGVSISWSPPEGTTARQVLDGYAVTYASSDGSSRRTDFVDR
SRSSHQLRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANA
ISVQWALHRIQHATVSRVRVSVLYPEDTVVQSTEVDRSVDRLTFGDLLPGRRYSVRLTTL
SGPGGAEYPTESLASAPLNVWTRPLPPANLTASRVTATSAHMVWDPPTPGISLEAYVINV
TTSQNTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAVQSTEQGQLHSEPAHLYIITSPRD
GTDRRWHQGGHHSRMLRNRPAPLRLPELRLLNDHGAPETPTQPPRFSELVDGRARVSARF
GGLPSRAVTVRSQPTTPVPLKNTEAPEQARLALQLPKNNSKDTESTPGSCSEDTCQNGGT
CVPGANAHSCDCRPGFKGRHCELACEKVPRPCTRLFSETKSFPVWEGDVCHHVYKKVYKV
HQDVCFKERCQSTSLKKLKQESN
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtggcgccgcctgggcgctgctgctggccgcagccctggggctcggggcgcgc
ggggtgcgcgctgcggtggccctcgccgacttctacccgttcggcacgaagcgtggcgac
gccgtcaccccgaagcaggacgacggcggctcagggctgcagcccctctcggtgcccttc
ccgttcttcggcgccgagcactcaggactctacgtgaacaacaacgggatcatctccttc
ctgaaggaagtttctcagttcacccctgtggccttccccatcgccaaagaccgctgtgtg
gtagcggccttctgggcagacgtggataaccgacgcgcaggcgacgtctactaccgggag
gccaccgacgcagccatgctgaacagagccacggaggacatcaggcggtactttcctgag
ctcccggacttctctgctacctgggtttttgttgccacctggtaccgtgtgaccttcttc
ggaggcagcagctcttcccccgtcaacacattccaaacggtgctcatcactgacggccgg
ttctccttcaccatcttcaactatgagtccatcctgtggactacgggcacacacgccagc
agtggtggtgatgctgatggcttgggaggcattgcagcccaggcaggtttcaacgcaggt
gatgggcaccgctacttcaacatccctgggtcgcgcacagcagacatggctgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgtttagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctctgtgtgcctagtcctgcgtccgtgcctcaat
ggtggcaagtgcatcgatgactgtgtcacgggcaatccctcctacacctgttcctgtctc
gctggcttcacggggcgtagatgccacctggatgtgaacgagtgtgcttcccacccatgt
cagaacggtgggacctgcacccacggtgtcaacagcttcagttgccagtgcccagccggc
ttccagggacccacctgtgaatcagcccagtctccgtgtgacaacaaagtgtgtcaaaat
ggtggccagtgccaggcagagagcagctctgcagtatgtgtgtgtcaagctggatacact
ggggccacctgtgagaccgatgtggatgaatgcagctctgacccatgcctaaatggtgga
tcgtgtgttgacctggttggaaactacagctgtatttgtgtggagccctttgaaggacct
cagtgcgagacaggaagctacgtggtgccttcgccctgcctctccaacccctgcctgaac
gggggcacctgtgtggatgctgaccagggatacgtgtgcgaatgccctgaaggtttcatg
ggcttggactgcagagagagaattctcaatgactgcgattgccggaatggaggcagatgc
ctgggtgccaacaccaccatctgccagtgtcctccaggcttctttgggctcctctgtgaa
tttgaagtcacagccacgccctgcaacatgaacactcagtgtccagatggaggctactgc
atggagtatggcggaagctacctatgtgtctgccacacggaccacaacatcagccattct
ctgccctcgccctgcgactcagacccatgctttaatggaggttcctgtgacgcccacgag
gactcctacacgtgcgagtgccctcgtggattccatggcaggcactgcgagaaagcccgg
ccacacctgtgcagctcagggccctgccggaatgggggcacatgcaaggagactggtgac
gagtaccgctgcacctgcccttaccggttcactgggagacactgtgagattggaaagcca
gactcctgtgcctctggcccctgtcacaacggtggcacttgtttccactacattggcaaa
tacaagtgtgactgccctccaggcttctctggtcggcactgtgagatagccccctccccc
tgcttccggagcccatgtatgaatgggggtatctgcgaggatctaggaacagatttctcc
tgccactgccaaccaggatatacaggacaccggtgtcaggcagaggtggactgcggtcag
cctgaggaggtaaaacatgctaccatgcgtctcaatggaactcgcatgggctcggtggcc
ctgtacacatgtgaccccggcttcagcctgagcgtcctcagccatatgcgtgtctgtcag
ccacaaggtgtctggagccagcctccccagtgcattgaagtagatgagtgccagtctcag
ccatgcctgcataaaggctcctgccaggacctcattgctggttaccagtgcctctgcagc
ccggggtacgaaggagtccactgtgagctagagacagacgagtgccaagcacagccctgc
agaaatggaggctcctgcagggacctccccggggctttcatctgccagtgccctgaaggt
tttgttggaacccactgtgaaacagaggtggatgcctgtgcctccagcccctgccagcac
ggaggccggtgtgaggacggtggtggggcctacctgtgcgtgtgtccagagggcttcttc
ggctacaactgtgagacagtgagtgacccctgcttctctagcccctgtgggggccgcggc
tactgcttggccagcaacgggtcccacagctgtacctgcaaagtgggctacacaggcaag
gactgcaccaaagagctcctcccaccaacagccctcagggtagaaagggtggaggagagt
ggggtctccatctcctggagcccacccgagggcaccacggccagacaggtgctggacggc
tatgcagtcacctatgcctcctcggatggatcgtccaggcgcacggactttgtggaccgg
agccgctcctctcaccagcttcgggccctggcagccggccgtgcctacaacatctctgtt
ttctcagtcaagagaaacactaacaacaaaaatgacatcagcaggcctgcagccctgctc
acccgcacccgaccccgccctattgaagacttcgaggtcaccaacatttcagccaatgcc
atctcagtgcagtgggctcttcataggatccagcatgccactgtcagcagggttcgagtg
tctgtcctctaccctgaggacactgtggtccagtccacggaggtggacaggagtgtggac
cgcctcacatttggggacctgctgccagggagaagatacagtgtgcggctaaccaccctc
agtgggcctggaggagctgaatatcctacagagagcctggcctcagctccgctgaacgtg
tggacccggcctttgcctccagcaaacctgactgcctctcgagtcacagcgacctctgcc
catatggtctgggacccgcccactccaggcatctcactggaggcttacgtcatcaatgtg
accaccagtcagaataccaagagccgctacatccccaatgggaagctggtgtcctatacg
gtgcgtgatctgatgccaggtcggcggtaccagctctcggtcacagcggtgcagagcaca
gagcagggccagctgcacagtgagcctgcgcacctctacatcatcacctcccccagggat
ggcaccgacaggcgctggcaccagggaggacaccactcacgaatgctcagaaataggccg
gcccctttgcgcctgccagaactgcgcctcctcaatgaccacggtgcccctgaaacacca
acccagccacccaggttctcagagcttgtagacggaagagcaagagtgagtgccaggttt
ggtggattgcccagcagagcagtaactgtgagatcacaacccactactccggtgccgctc
aagaacacagaggcccctgagcaggcccgtctggcccttcagctacccaagaacaacagc
aaggacacagaaagtacccctggcagctgttcagaagacacctgtcagaatggaggcacc
tgtgtcccaggtgccaatgcccacagctgtgactgcaggcctgggttcaaaggcagacac
tgtgagcttgcctgtgaaaaagtgccccgcccctgcacacggctgttctctgagaccaag
tcatttcctgtctgggaaggagatgtctgccaccatgtgtataagaaagtctacaaagtt
caccaggacgtgtgttttaaggagcgctgccagagcacaagcctcaaaaagctcaaacag
gaatcaaattaa
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