Rattus norvegicus (rat): 316742
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Entry
316742 CDS
T01003
Symbol
Tgif1
Name
(RefSeq) homeobox protein TGIF1
KO
K19383
homeobox protein TGIF1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
316742 (Tgif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
316742 (Tgif1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
316742 (Tgif1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Eap1
Homez
Motif
Other DBs
NCBI-GeneID:
316742
NCBI-ProteinID:
NP_001015020
RGD:
1310517
Ensembl:
ENSRNOG00000015906
UniProt:
Q5BJZ9
F7FQ57
LinkDB
All DBs
Position
9:complement(118194735..118204354)
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AA seq
287 aa
AA seq
DB search
MIYTSRRCALAGSGWPSRHGVVAAASGSDSEDEDSMDSPLDLSSSAASGKRRRRGNLPKE
SVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDP
NQFTISRRGAKISEASSIEAAMGIKNFMPTLEESPFHSCVVGPNPTLGRPVSPKPPSPGP
ILARPSVICHTTVTALKDGPFSLCQAVSVGHSTDVQQVAPSNFTDASLRYPEDTCKSGPS
PNPQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKQAAEMELQAKLTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgatttacacgagcaggaggtgtgcattggcggggtccggctggccttcgcgtcacggt
gttgttgcagcagcatccggcagtgactctgaggatgaagacagtatggacagtcccttg
gacctttcatcgtcagcggcctctggcaagagaaggaggagaggcaatctgcccaaagag
tccgtccagattcttcgagactggctgtatgaacacagatacaacgcatacccctcagag
caagagaaagccctgctgtcgcagcagacacacctgtccacactacaggtctgtaactgg
ttcatcaacgcccgtcgcaggctccttcctgacatgctgagaaaggatggcaaagaccca
aatcagttcaccatttcccgccgaggggccaagatctcagaagctagctctattgaagct
gcaatgggtatcaaaaacttcatgccaactctagaagagagcccatttcattcctgcgta
gttggacccaacccaaccctagggagaccagtgtctcccaaacctccctccccgggaccc
atcttggctcgcccctcagtgatctgccataccactgtgactgcattgaaggacgggcct
ttctctctctgccaggcagtcagtgtgggacatagtacagatgtacagcaggtagcaccc
agcaactttacagacgcctctctcaggtacccagaggacacttgcaaatctggacccagt
ccaaatcctcagagtggtcttttcaacactcctcccccgactccgccagacctcaaccag
gattttagtggatttcagctcctggtggacgttgcgctcaagcaggcagcagagatggag
cttcaggccaaactcacagcttaa
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