Rattus norvegicus (rat): 316794
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Entry
316794 CDS
T01003
Symbol
Brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03440
Homologous recombination
rno04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
316794 (Brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
316794 (Brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
316794 (Brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
316794 (Brcc3)
03036 Chromosome and associated proteins [BR:
rno03036
]
316794 (Brcc3)
03400 DNA repair and recombination proteins [BR:
rno03400
]
316794 (Brcc3)
Peptidases and inhibitors [BR:
rno01002
]
Metallo peptidases
Family M67
316794 (Brcc3)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
316794 (Brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
316794 (Brcc3)
BRISC complex
316794 (Brcc3)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
316794 (Brcc3)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
316794 (Brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
316794
NCBI-ProteinID:
NP_001120772
RGD:
1588543
Ensembl:
ENSRNOG00000048061
UniProt:
B2RYM5
LinkDB
All DBs
Position
9:2073927..2076469
Genome browser
AA seq
291 aa
AA seq
DB search
MAVPVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDVRSESKFAHAGSDVC
TVPEKVDSIRVVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQK
SSDYERIEIPVHVVPHVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNG
SVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQREKEELMAELRSLE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccggtggttcaggccgtgcaggctgtccatctggagtcggacgcctttctg
gtttgtctgaaccacgccctgagtacggagaaagaggaggtgatgggtctgtgcatcggg
gagctgaacgacgacgtaaggagtgagtccaaattcgcacacgccggaagtgacgtgtgc
acggttccggagaaggtggattcgatcagagtcgtccacatccactcggtcatcatcctg
cgccgttctgacaagaggaaggaccgcgtggagatttccccagagcagctgtctgcagcc
tcgactgaggcggaaaggttggcggaactcactggccgtcccatgagagtcgtcggctgg
taccattcgcaccctcacataacggtgtggccttcacacgtggatgttcgcacgcaagcc
atgtaccaaatgatggaccaaggcttcgtgggacttattttctcctgtttcatagaagac
aagaacacaaagaccggacgtgtcctctacacttgcttccaatccgtacaagcccagaaa
agctcagactatgagagaatcgaaatccccgtccacgtcgttccccacgtcaccatcggg
aaagtttgcctggagtccgcggtggagctgccgaagatcctgtgtcaggaggagcaggac
gcgtacaggcggatccatagcctcacacatctggactcggtgaccaagatccacaatggc
tcggtcttcaccaagaatctgtgcagccagatgtcggcggtgagtgggcctctgctgcag
tggttagaggacagattggagcaaaaccagcagcatctgcgggagctgcagcgggagaag
gaggagctcatggcggagctgcgttcgctcgaataa
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