Rattus norvegicus (rat): 317183
Help
Entry
317183 CDS
T01003
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19 precursor
KO
K28837
protocadherin-19, delta 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
317183 (Pcdh19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
317183 (Pcdh19)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
317183 (Pcdh19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
317183
NCBI-ProteinID:
NP_001162600
RGD:
1565392
Ensembl:
ENSRNOG00000003929
UniProt:
D3ZG18
LinkDB
All DBs
Position
X:complement(101061002..101166777)
Genome browser
AA seq
1098 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFAMDTRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHMGTVGLTIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPIINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGM
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFNENSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNTRNTTANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSHMP
DHDQNDGFHCREECRILGHSDRCWMPRNPMPTRSKSPEHMRNIIALSIEATAADVEAYDD
CGPTKRTFATFGKDVSSHPAEERSILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTS
PLHLKSPLPTKPSMSYTVALAPPAHDLDHHANTGASRPSEAEPRGADSEKVMHEVNPILK
EGRDKESPAVKRLKDIIL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcctgctgccggtgctattgctgctggctgtactatggacgcaggcggcc
gccctgattaaccttaaatactcagtagaagaggagcagcgcgccgggactgtgatcgct
aatgtggccaaggacgcgcgggaggcaggcttcgcgatggatacccgacaggcttctgct
ttccgcgtggtgtccaactcggctccgcacctggtggacatcaaccccagttcgggcctc
ttggtcaccaagcagaagattgaccgagacctgctgtgccgccagagccccaagtgtatc
atctcgctagaggtcatgtccagctcaatggaaatctgtgtgattaaggtggaaatcaag
gacctgaacgacaatgctcccagttttccggccgcacagattgaactggagatctctgag
gcagccagccccggcacgcgtatcccactggacagcgcatatgacccggactcaggcagt
ttcggtgtgcagacctacgagctcacgcccaacgagctgtttggcctggaaataaagacg
cggggtgacggttcgcgctttgctgaactcgtggtggagaagagcctggaccgcgagaca
cagtcacactacagctttcgcattacggcgctcgacggaggcgacccaccacacatgggc
acagttggcctcaccatcaaggtgaccgactcgaatgacaacaacccggtgtttggtgag
tccacttactccgtgagcgtgcctgaaaactcacctcccaatacacctgtcatccgcctc
aatgccagcgatccagatgagggcaccaacggccaagtagtctactctttctatggttat
gtcaatgaccgcacgcgtgaactcttccaaattgacccacacagcggcctggtcactgtc
accggtgcgctagactatgaagagggccacgtgtacgaactggatgtgcaagccaaagac
ctggggcccaactctatccctgcacactgcaaagtcactgtcagcgtgctagacactaac
gataacccgccaattatcaaccttctgtcggtcaatagcgagcttgtggaggtgagcgag
agcgcccccccgggctatgtgattgctctggttcgggtgtctgatcgcgactccggtcta
aatggacgtgtgcagtgccgcttgctgggcaatgtcccctttaggctgcaggagtatgag
agcttctccactattcttgttgatggacggctggatcgagagcagcatgaccaatacaat
cttactattcaggctcgagacagcggtgtgcctatgctgcaaagtgccaagtcttttact
gtgcgtatcacagacgagaatgataaccacccacacttctctaagccttactatcaagtc
attgtacaggagaacaacactcctggcgcctatctgctctctgtgtctgcccgtgaccct
gacttgggtctcaatggcagcgtctcctaccaaattgtgccatcacaggtgcgagacatg
ccagtcttcacctatgtctctatcaatcccaactctggtgacatctatgcgctaagatcc
tttaaccatgagcagaccaaggcatttgaattcaaagtcctggccaaggatggtggcatg
ccctccctgcaaagcaatgccactgtgagggtcattatcctcgacgtcaacgacaatacc
ccggttatcactgccccacctctgatcaatggcactgctgaagtctacattcctcgaaat
tctggcataggctatttggtgactgtagttaaggcagatgattatgatgagggcgaaaat
ggccgagtcacctatgacatgacagaaggtgaccgaggtttcttcgaaatagaccaggtc
aatggagaagtcagaaccactcgtacctttaatgagaactccaaggcttcctatgagctt
atagtggtggcccatgaccatggcaagacatctctttctgcttctgcccttgtcctaatc
tacctgtccccagctcttgatgctcaagagtcaatgggctctgtgaacttatccctgatt
ttcattattgctctgggctccattgccggcattctctttgtcactatgatcttcgtggca
atcaagtgcaagcgtgacaacaaagagatccggacctacaattgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagtaagaagaaaaaaattagtaagaatgacatccgc
cttgtacctcgggacgtggaggagacagacaagatgaatgttgtcagttgctcctccctt
acttcgtccctcaactatttcgactaccaccagcagacactgcccctgggctgccgtcgc
tctgagagcactttcctgaatgtggagaaccagaatacccgcaacaccactgccaaccac
atctaccatcactccttcaacagccagggcccacagcagccagacctgatcatcaatggt
gtgcccctgcctgagactgaaaactattcctttgactctaactacgtgaatagccgtgcc
catttaatcaaaagcagctccaccttcaaggacctagagggcaacagcctgaaggatagt
gggcatgaggagagtgaccagaccgacagtgaacatgatgtccagaggagcctgtactgc
gatactgccgtgaatgatgttctcaataccagcgtgacctccatgggatctcacatgcct
gaccatgaccagaatgacggatttcattgcagggaagagtgccggattcttggccactct
gatagatgctggatgccccggaatcccatgcccactcgctccaagtcgcctgagcacatg
aggaacatcatcgctctgtccattgaagctaccgctgctgatgttgaagcttatgacgac
tgcggccccaccaagcggacttttgcaaccttcggaaaagatgtcagtagccacccagct
gaggagcggtccatcctgaaaggcaagcggactgtcgatgtgaccatctgcagccccaaa
gtcaacagcgctatccgggaggcgggcaatggctgtgaagctattagccccgtcacctcc
ccactccatctgaagagccctctgcctaccaagccttccatgtcttacaccgtcgccctg
gctcctccagctcatgatctggatcaccatgccaacactggcgcctctcgtccttctgaa
gctgagccccgtggagccgacagcgagaaagtcatgcacgaggtcaatcctattctgaag
gaagggcgtgacaaggaatctcccgccgtgaagcgtctgaaggatatcattctctaa
DBGET
integrated database retrieval system
