Rattus norvegicus (rat): 317204
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Entry
317204 CDS
T01003
Symbol
Pcdh11x
Name
(RefSeq) protocadherin-11 X-linked precursor
KO
K16498
protocadherin delta 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
317204 (Pcdh11x)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
317204 (Pcdh11x)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
317204 (Pcdh11x)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
317204 (Pcdh11x)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
317204 (Pcdh11x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Ig_Cad99C_N
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
Cadherin_CELSR2_9th
Slr1353_N
Ig_TRS130_1st
SPAR
Motif
Other DBs
NCBI-GeneID:
317204
NCBI-ProteinID:
NP_001258157
RGD:
1562864
Ensembl:
ENSRNOG00000069840
UniProt:
A0ABK0KXL9
LinkDB
All DBs
Position
X:90279191..90974671
Genome browser
AA seq
1338 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIK
SQNVFGLDVVETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNNAKRLF
HLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPAKAMVLVNVTDINDNVPSIDIRYI
VNPTNGTVLLSENAPLNTKIALITVTDKDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS
PGAQLTKISATDADSGRNAEINYLLGFDAPPEFNLDRRTGILTAVKKLDREKQEKYYFTV
LAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPKHGTVGLITVTDPDYG
ENSAVTLSVLDVNDQFTIDPQSGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPIFIDPPSNYSFEWVLPSTDPGTVIFKVLAIDNDTGMNAELRYSIVGGNT
KGLFMIEQISGNITLKEKCMVSDIGLHRVIVKAKDLGQPDSLFNVVNVNLFVNESVPNTT
LIYEMVRKSIDSPANQNSETTSASSPTTDYVKIMVAIVAGTITVVLVIFITAVVRCRQSP
HLKASQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHPPKNLLLNFVSIEEAKPDDADNE
RNSVTLDLPIELEDQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPPMKEVVRS
HTPMKEATTVEIWTHPHPQRRSDGKKAGKSQRRVTFHLPEGSQESISDGGLGDHDPGSLP
STSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDTC
TQECLILGHSDSCWMPASLTNPTPSQIKTSAICHSPPRTHSSVRRCSPPVTQTVAICHSP
PVTQAIALCHSPPPVQATVLRHSSPPAQASAVCYSPTLVQAVVIHRSPPLPQAATLRHTQ
AQPPMGLQQGWVQGAGADGTHPIDQGVQGSTRAQFYTMAERLHPDDDSIKVIPLTTFTSG
KQARASRGDSPIMEEHPL
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaattatacagtccgagaagaaatgccagaaaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgcttattcccgacaagtccttaaccacgcct
atgcaattcaaattagtttacaaaaccggggatgtaccattgattcggattgaagagggt
actggcgagatcttcactactggcgcacgcattgatcgtgagaaattatgtgctggaatc
gtgttggatgctcgttgcttttacgaagtggaggttgctgttttgccggatgaaatattt
agattggttaagatacgctttctgatagaagacataaatgataatgcaccgttattcccg
acaactgtcatcaacatatcaattccagaaaactcggctataaactctcgatattctctt
ccggcagccattgatcctgacattggaataaatggagtccaaaattaccaactaattaag
agtcaaaatgttttcggtcttgatgtcgttgaaacaccagaaggagaaaagatgccccag
ctgatcgttcaaaaggaattagatagagaagaaaaggatacctatgtgatgaaagtaaaa
gttgaagatggtggctttcctcaaagatccagtacagctattttgcaagtaagtgttgct
gatacaaacgacaaccgcccaatcttcatagagaaggaaattgaagtcagtataccagaa
aatgctcctataggttcttcagtgacacaactccatgccacagatgctgatataggtgaa
aacgccagaattcacttttatttcagcaatctagtctccaataacgctaagagactgttt
catcttaacaccactaccgggcttatcactgtcaaagaaccactggatagggaagaatca
ccaagccacaagttattggttttggcaactgatggtggatcgacaccagcaaaagcaatg
gtgctggtaaatgttacagatatcaatgataatgtaccatcaattgacataagatacatc
gtcaatccaaccaatggcactgtgctcctttcagagaatgctccgcttaacactaaaatt
gctctcataactgtgacggataaggattctgaacataatggtagggtgacatgcttcaca
gatcatgaagttcctttcagattacgtccagtattcagtaatcagtttctcttggagaca
gctgcatttcttgactttgagtccaccagagaatatgccattaaattactggccgctgat
gctggcaaacctcctttgaatcagtcatccatgctcctgatcaaagtaaaagatgaaaat
gacaatgctccggttttcacccaatctttcataagcctttccgttcctgagaataactct
cctggtgcacagttgacaaaaatcagtgcaacagatgcagacagtggacgcaatgctgaa
ataaactacctgctaggttttgatgcaccacctgaattcaacctggatcgtcgtacaggc
atcctgactgcagtgaagaaactagatagagaaaaacaggaaaagtattactttacagtc
ctggcacaggacaatggaattccacccttaatgtccaatgccactgtgttcgtgactgtt
cttgaccagaatgataacagcccaattttcactcataatgaatataacttctatgttcct
gaaaaccttccaaaacatggcacagtagggctaataactgtgactgatcctgattatggg
gagaattctgcagttactctctctgtcttagatgtaaacgatcaattcactattgatcca
cagtctggtgtcatcaggccaaatatttcatttgacagagaaaaacaagaatcctatact
ttctatgtaaaagctgaggatggtggtagggtatcacgttcttcaactgctaaagtaacc
ataaatgtggttgacgtaaatgataacaaaccaatttttattgaccctccttccaattac
tcctttgaatgggttctaccatccacagatcctggcacagtcatcttcaaggttcttgca
attgacaatgatactggcatgaatgcagagcttcgttacagcattgttggaggaaacaca
aaaggactgtttatgattgaacaaatatcaggcaacatcacattgaaggagaagtgcatg
gtttcagatattggtttacatcgagtcatagtcaaggctaaagatttaggacaacctgat
tctctcttcaatgttgtaaatgtcaatctctttgtaaatgagtctgtgcccaatactacc
ctgatttatgaaatggtgcgcaaaagcattgactcacctgcaaatcaaaattctgaaaca
acaagtgcatcctcaccaaccaccgactatgtcaagatcatggttgccattgttgctggc
accataactgttgtcctagttattttcatcactgctgtagtaagatgccgccaatcacca
caccttaaggcttctcagaaaaacaaacagaattctgagtgggttactccaaacccagaa
aacagacagatgatcatgatgaagaagaagaagaagaaaaagaagaagcatccccccaag
aacctgctgcttaattttgttagtattgaagaagcaaagccagatgatgctgacaatgag
agaaacagtgttacactagatcttcctattgagctggaggatcaaaccatgggcaaatac
aactggggcactacacctactaccttcaagcccgatagccctgatttggctcgacactac
aaatctgcctctccccagcctgcattccagatccagcctgaaacacccctaaactcaaag
caccacatcattcaggagcttcctcttgataataccttcgttgggtgtgattccatctcc
aagtgctcctccagcagttctgatccctacagtgtttctgagtgcagctatccagtgaca
actttcaagactcctgtgtctgtgcataccagacctccaatgaaggaagtcgtacgatct
cacacacctatgaaagaggcaacaactgtggaaatctggactcatccgcacccacagcgg
agatctgatggaaaaaaggcaggaaagtcccagagacgtgttacatttcacctaccagaa
ggctctcaggaaagcatcagtgatggtggattgggagaccatgatccaggcagccttccc
agtacatcccatgcactgccacttggctatccacaggaagagtattttgatcatgctgca
ccaaacaaccgcactgaaggggatggcaactctgatcctgaatctactttcattcctgga
ctaaagaaagctgcagaaataacagtgcagccaactgtggaagaagcctctgacacctgc
actcaagaatgcctcatcctgggccactctgactcctgctggatgccagcttcgctgacc
aatcctactccttcacagataaagacttctgctatctgccacagtccacccaggacccat
tcatcagttcgtcgctgcagccctccagtgacacagactgttgctatctgccacagtcct
cctgtgacccaggctattgccctgtgccacagccctccaccagtacaggctaccgtactc
cgtcatagctcaccaccagcacaggcctctgcagtctgctacagcccaactctggtacag
gctgtggtaattcaccgcagtcctcctctgccacaggctgccacactccgtcacactcag
gcacaaccaccaatgggtttacagcaaggatgggtgcagggtgcaggagcagatggaaca
catcctattgatcagggagtacagggtagtacgagagctcagttttacaccatggctgaa
agacttcatccagatgatgactcaattaaagtcattcctttgaccacctttacttcaggt
aaacaggccagagcctcaagaggtgattctcccatcatggaggaacatcccttgtaa
DBGET
integrated database retrieval system
