Rattus norvegicus (rat): 317517
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Entry
317517 CDS
T01003
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
317517 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Other domain-containing proteins
Patched domain-containing proteins
317517 (Ptchd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
317517
NCBI-ProteinID:
NP_001178663
RGD:
1564527
Ensembl:
ENSRNOG00000069252
UniProt:
A0A8I5ZYJ0
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All DBs
Position
X:43496907..43548413
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSYQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAHQKYFNNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STDLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMLDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtcttcttcgcttcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtggaagagagcgtggagcacctgctggcgccccagcac
agcctagccaagatcgagcgcaacctagtcaacagcctattcccggtcaaccgctccaag
caccggctctactcggacctgcagacccctgggcgctacggccgggtcattgtcacctcc
taccagaaagccaacatgctagaccagcatcacacggacctgatcttaaagttgcacact
gctgtaaccaagatccaggttccaaggcctggctttaactatacatttgcccacatatgt
gtcctgaataatgataagacttgcattgtggatgacatagtacacgtcctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacatatccgatcactcactta
aaggatggaagggctgtctataatgggcaccaacttggaggtgtcactgtgcacagcaag
gatcgggtgaaatctgcggaggccattcagctcacctactatctgcaatcaatcaacagt
ctcaatgacatggtagctgagaggtgggagtccagcttctgcgacactgtcaaattattc
cagaaatccaacagcaaagtcaaaatatacccgtacacatcctcatcactgagggaagat
ttccagaagaccagccgtgtgtcagaacgttacctggtcaccagtctgatccttgtagtc
accatggccattctgtgctgctctatgcaggactgtgtccgcagcaaaccctggttaggc
ctacttgggttggtgaccataagcctagccactctcactgcagctggaatcatcaatctt
actggtggaaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatacgggacttttgaaatgttatcctcgtggagaaaaactagagaggaccaacatgtt
aaagagcgaactgcagaagtctatgcagactccatgctctccttctctctcaccactgcc
atgtacttggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcctcttcaactacctctatgtactctcattt
tacggttccagccttgtgttcactggctacatagaaaacaattaccagcatagtatattc
tgtagaaaagttccaaagcctgaggtattacaggagaagccagcatggtataggtttctt
ctgacagctagattcagtgaggacacagctgaaggtgaggaagcaaacacttatgagagt
catttattggtatgtttcctcaaacgttattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacacaaaccattgag
tacactactgcccaccaaaagtactttaacaactacagtcctgttattgggttttacata
tatgagtccatagaatattggaactctagtgtccaagaagatgttctagagtacactaag
ggttttgtgcggatatcctggtttgaaagctatttaaattatcttcggaaactcaatgtg
tccactgacttgcctaagaaaaatttcacagacatgttgagaaattccttcctgaaagct
cctcaattttcacattttcaagaggacatcatcttctctaaaaaatacaatgatgaggtt
gacgtagtggcctctagaatgtttttggtggccaagactatggaaacaaacagagaagaa
ctttatgatctcttggagaccctgaggaggctttcagtcacctccaaggtgaagttcatt
gtctttaatccgtcttttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtagcagat
tcgctgattaatgtctggatcactctaacggttgtgtctgtggagtttggagtgataggc
ttcatgacattatggaaggtcgaactggattgtatttctgtgctatgcttaatttatgga
attaactacacaattgataactgtgctccactgttatccacatttgtcctaggcaaggat
tttacaagaactaaatgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgttatattgttggtctatttcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtagaaatgttggatattgacagtactcga
gtggttgaccaaattaccacagtgtga
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