Rattus norvegicus (rat): 353256
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Entry
353256 CDS
T01003
Symbol
Gtf2i
Name
(RefSeq) general transcription factor II-I isoform 1
KO
K03121
transcription initiation factor TFII-I
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03022
Basal transcription factors
rno04022
cGMP-PKG signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
353256 (Gtf2i)
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
353256 (Gtf2i)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
353256 (Gtf2i)
03036 Chromosome and associated proteins [BR:
rno03036
]
353256 (Gtf2i)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
353256 (Gtf2i)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
353256 (Gtf2i)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
353256
NCBI-ProteinID:
NP_001001512
RGD:
727961
Ensembl:
ENSRNOG00000001479
Vega:
OTTRNOG00000002222
UniProt:
Q5U2Y1
LinkDB
All DBs
Position
12:28037344..28112677
Genome browser
AA seq
913 aa
AA seq
DB search
MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYF
CFCYGKALGKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGI
SFIIKRPFLEPKKHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSDDDYSPPTKRPK
SSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTI
PYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTRED
LQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVE
GLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWN
VRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFG
IPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIE
VTVEGPNNNSPQTSTVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKC
GEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFII
KKPEMFETAIKESTSSKSPPRKTNSSPSVNTTASGVEDLNIIQVTIPDDDNERLSKVEKA
RQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISS
MRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPATEEIKETD
GSSQIKQEPDPTW
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagtagcgatgtccgcgctgcctgcggaggatgaggagtcttcggagagcagg
atggtggtgacgttcctcatgtctgccctggagtccatgtgtaaagagctggccaagtcc
aaggctgaggtggcctgcatcgccgtgtatgagacagatgtgtttgtcgttggaaccgaa
agagggcgtgcttttgtcaataccagaaaagatttccaaaaagattttgtgaagtattgt
gttgaagaagaagaaaaggccgccgagatgcataagatgaaatgtacaacccaggccaac
cggatgagcgtggatgctgtagaaattgagaccctcagaaaaacggtggaggactatttc
tgcttttgttatgggaaagccttaggcaaatccacagtggtccctgtgccatatgagaag
atgctgcgtgaccagtcagctgtggcggtgcaggggcttcccgagggggtcgccttcaag
catcccgagcactatgacctcgcaaccttgaagtggattctggagaacaaggcggggatt
tccttcatcatcaagagacctttcctcgagccgaagaaacaccttggtggtcgagtgatg
gcggccgatgctgacaggcccatgctgtctccgggtggaagttgtggccccatcaaagtg
aaaactgagcccacggaagattctgatgatgattattctccacctaccaagaggccaaag
agcagtgagccgcccccacccccaccggtcccagagcccaccaacgccggcaagcgcaaa
gtgagggagttcaactttgagaaatggaacgcgcgcatcactgacctacggaaacaagtg
gaagaattgtttgaaagaaaatacgctcaagctataaaagccaaaggcccggtgacgatc
ccataccctcttttccagtcgcacgtcgaagatctgtatgtagagggccttcctgaaggg
atcccctttagaaggccatcaacgtacggcattcctcgcctggagaggatattgctggca
aaggagaggatccgctttgtgatcaagaaacatgagcttctgaactcaacacgagaagat
ttacagctggacaagcccgcatcaggagtgaaggaagagtggtatgctcgtatcaccaaa
ctgaggaagatggttgaccagctcttctgcaagaaatttgctgaggccttgggaagcaca
gaagccaaggctgtaccgtaccaaaaattcgaggcctatcccaatgatctctatgtggaa
ggacttccagaaaacattcctttccgaagcccctcatggtatggaatcccaagactggaa
aaaatcatccaagtgggcaatcgaattaaatttgttatcaagagaccagaactgctgact
cacagtacaactgaggtgactcagccacggacgaatacgccagtcaaggaagattggaac
gtcaggatcaccaagctccgcaagcaggtggaggagatctttaacttgaagtttgctcaa
gctcttggcctcacagaggctgtgaaggtgccgtatcctgtgttcgaatccaacccagaa
tttctgtatgtggaagggctccctgaggggatccccttccgaagccctacctggtttggg
attccacgccttgagaggattgtccgtgggagcaataagatcaagtttgttgttaaaaag
cccgagctagttgtgtcctacttgcctcctgggatggctagcaaaatcaacactaaagca
ttgcagtccccgaaacgaccacgaagccctgggagcaactccaaggtccctgaaatcgag
gtcactgtggaaggccccaacaacaacagtcctcagacctctaccgttcgaactcctacc
cagaccaacggttcaaacgttcccttcaagcctcgagggagagagttttcctttgaggcc
tggaacgctaagatcacagacctgaagcagaaagtggagaatctcttcaatgaaaagtgc
ggggaagctcttggccttaagcaggctgtgaaagtaccgtttgcgctatttgagtccttc
ccagaggacttctacgtagaaggcttacccgagggcgtgcccttccgaagaccatccact
tttggcattccaaggctggagaagatcctccggaacaaggccaagataaagttcatcatt
aaaaaacctgagatgttcgagacggccatcaaagagagcacctcttccaaaagccctccg
aggaagacgaactcatcccccagtgtcaatacgacagcctcaggtgtggaagatcttaac
atcattcaggtgacaatcccagatgacgacaacgaacgactctccaaagtcgagaaggcc
aggcagcttcgggagcaagtcaacgacctcttcagccgaaagtttggtgaagctattggg
atgggcttccccgtgaaggtcccctacaggaaaatcaccatcaaccctggctgcgtggtg
gtcgatggcatgcccccgggggtgtccttcaaagcccccagctatctggagatcagctcc
atgagaaggatcttagattctgctgagtttatcaagttcactgtcattagaccattccca
ggactggtgattaataaccagctggttgatcagaatgagtctgaaggccctgtgatacaa
gaatcagctgaggcaagccagttggaagttccagcaacagaagaaatcaaagagacagat
gggagctcacagatcaagcaggagccagaccccacgtggtag
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