Rattus norvegicus (rat): 360520
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Entry
360520 CDS
T01003
Symbol
Tbc1d9b
Name
(RefSeq) TBC1 domain family member 9B isoform 1
KO
K19951
TBC1 domain family member 8/9
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
360520 (Tbc1d9b)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
360520 (Tbc1d9b)
Endosome - Golgi transport
Rab GTPases and associated proteins
360520 (Tbc1d9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
360520
NCBI-ProteinID:
NP_001381172
RGD:
1310147
Ensembl:
ENSRNOG00000003050
LinkDB
All DBs
Position
10:34961012..34998227
Genome browser
AA seq
1263 aa
AA seq
DB search
MWLGPEEVLVANALWVTERANPFFVLQRRRGHGKGGGLTGLLVGTLDVVLDSSARVAPYR
ILHQTQDSQVYWTVACGSSRKEITKHWEWLENNLLQTLSIFDNEEDITTFVKGKIHGIIA
EENKNLQPQGDEDPGKFKEAELKMRKQFGMPEGEKLVNYYSCSFWKGRVPRQGWLYLTVN
HLCFYSFLLGKEVSLVVQWVDVTRLEKNATLLFPESIRVDTRDQELFFSMFLNIGETFKL
MEQLANLAMRQLLDSEGFLEDKALPRPIRPHKNISALKRDLDARAKNECYRATFRLPKDE
RLDGHTGCTLWTPFNKLHIPGQMFISYNYICFASKEEDACRLIIPLREVTIVEKADSSSV
LPSPLSISTKSKMTFLFANLKDRDFLVQRISDFLQKTPSKQTGSIAGGTKASVPDPAPES
LPTPQEASEPPTSPTSPLSSPLSFSTQEIPTTSQGLLKVFQKNSPMEDLGAKGAKEKMKE
ESWNIHFFEYGRGVCMYRTAKTRELVLKGIPESLRGELWLLFSGAWNEMVTHPGYYAELV
EKSMGKYSLATEEIERDLHRSMPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIV
TSVLLLYGSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDVLPRLSEKMQE
LGVISSISLSWFLTLFLSVMPFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLDCSD
EGEAMTVLGRYLDNVVNKQSISPPIPHLHALLTSGDDPPAEVDIFDLLKVSYEKFSSLRA
DDIEQMRFKQRLKVIQSLEDTAKRSVVRAIPGDIGFSIEELEDLYMVFKAKHLASQYWGG
NRSAAIHRDPSLPYLEQYRIDASQFRELFASLTPWACGSHTPVLAGRMFRLLDQNKDSLI
NFKEFVTGMSGMYHGDLTEKLKALYKLHLPPALIPEEAESALEAAHYFPEDSSSEASPLA
SDLDLFLPWEAQAGLQEQQEGRGSEDIQERREEKETSPPDYRHYLRIWAKEKEAQKETIK
DLPKMNQEQFIELCKTLYNMFSEDPLEQDLYHAIATVASLLLRIGEVGKKFSALTTKKPR
DGAHSGDHNSATEEDEPPISKLHQDPARECQPPAAGDPQAKASGDMHLGKALQDSHVIVE
GGSGEGQGSPSLLLSDDETKDDMSMSSYSVVSTGSLPCEDLTEDTVLVGGEACSPTATSR
MGGTVDMDWCISFEQILASILTESVLVNFFEKRVDIGLKIKDQKKVERQFSTSSDHEPPG
VLG
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcggcccggaggaggtgctggtggccaacgcgctatgggtgacggagcgggcc
aaccccttcttcgtgctgcagcggcgccgaggccatggcaagggtggcggcctcacgggt
cttcttgtgggcaccctggatgtggtgctggactccagtgcccgtgtggccccctaccgc
atcctgcaccagacccaggactcacaggtctactggacggtggcatgtggttcttcccgc
aaagagatcaccaaacactgggagtggctggaaaacaacttacttcagacgctgtccatc
ttcgacaacgaggaggacatcactaccttcgtcaagggcaagatacacggcatcatcgca
gaagagaacaagaacctgcagccccagggggacgaggacccagggaaattcaaggaggca
gagctaaagatgcggaagcagttcggcatgccagagggagagaagctggtcaactactac
tcctgtagcttctggaagggccgagtgcctcggcagggctggctctacctgaccgtcaac
cacctgtgtttctactccttcttgctggggaaggaagtgagcctggtggtacagtgggtg
gacgttacacgcttggagaagaatgccactttactcttccccgagagcatccgtgtggac
acgcgggaccaggagctattcttctccatgttcctaaacattggtgagaccttcaagctc
atggaacagctggccaacctggccatgcgacaactgctggacagcgagggcttcctggag
gacaaggccctgcccaggcctatccggccacataagaacatctcagctctaaagcgagac
ctggatgcccgagctaagaacgagtgctacagggccacgttccggctcccaaaagatgaa
cggctggatggacacacaggttgcaccctgtggacaccatttaacaagctacacatcccc
ggccagatgttcatctcctataactacatctgctttgccagcaaagaggaagatgcgtgc
cgcctcatcatacccctgagggaggtgaccattgttgagaaagctgacagctccagtgtc
ctgcccagccctctgtctatcagcactaagagtaaaatgaccttcttgtttgccaacctg
aaagaccgtgacttcctggttcagaggatctctgacttcctccagaaaacaccgtccaaa
cagacaggcagcatcgctgggggaacaaaggccagtgttccagacccagccccagagtct
ctcccaactcctcaggaggcatcagagccacccaccagcccaacctctcccctaagcagc
cctctgagtttcagtacacaggagattcctactacttcccagggcctgctcaaagtcttc
cagaagaactcacccatggaggacctcggcgccaaaggggccaaggagaagatgaaggaa
gagtcctggaacatccacttctttgagtacgggcgtggcgtgtgcatgtaccgaacagcc
aaaactcgggagctggtcctgaaaggcatccccgagagcctccgaggggagctttggctc
ctcttctcgggggcctggaatgagatggtgacccatcctggctactacgctgagctagta
gagaagtccatggggaagtacagcttggccaccgaagagatcgagcgggacctccatcgc
tccatgcctgagcaccctgccttccagaacgagctggggatcgctgcactccggcgggtg
ctgaccgcctacgccttccgaaacccgactattggctactgccaggcaatgaacatcgtg
acctcggtgctcctgctctatggcagtgaggaagaagccttctggctactggtggccctg
tgtgagcgcatgctgcccgactactacaataccagagtagtgggggccctcgtagaccaa
ggtatctttgaagagctcacaagagacgtcctgccccggctctcagagaagatgcaggag
ctgggggtgatctccagcatctcgctgtcctggttcctgaccctcttcctcagcgtcatg
ccctttgagagcgcagtggttattgttgactgctttttctacgagggcatcaaagtgata
ctgcaggtggccttggctgtgctggacgccaacatggaacagctgctggactgcagtgac
gagggcgaggccatgaccgtgctgggcaggtacctggacaatgtggtcaacaagcagagc
atttctccacctatcccacacctccatgctctgctgaccagtggagatgaccctcctgca
gaggtggacatctttgacctcctgaaagtgtcttatgagaagttcagcagcctgagggct
gacgacattgaacagatgcggtttaaacagaggctgaaggtgatccagtccttggaagac
acagccaagagaagcgtggtccgggccataccaggggacattggcttctccatcgaagag
ctggaggatctttacatggtgtttaaggccaagcatctggcaagccagtactggggtggt
aaccgctcagcagccatccaccgagaccccagcctgccctacctggagcagtaccggatc
gatgccagccagtttcgggagctctttgccagcctgacgccttgggcctgtggctctcac
acgcctgtcttggcaggccgcatgttccgcctcctggaccaaaacaaggactcactgatc
aacttcaaggagtttgtgacagggatgagtgggatgtaccatggagacctcacagagaag
ctcaaagcgctctacaagctgcacctgcccccagctctgatcccagaggaagcggagtca
gccctggaggccgcccattatttcccagaggatagctcctcagaagcatctcctctggcc
tcagatctggatcttttcctgccttgggaggctcaagcaggactgcaggagcagcaggaa
ggaagaggaagtgaggacatccaggaaaggagagaggagaaggagaccagcccccctgac
taccgacactaccttcgaatatgggctaaggagaaagaggctcagaaggaaaccatcaag
gaccttcccaagatgaaccaggagcaattcattgagctgtgtaaaacactttacaacatg
tttagcgaagaccctttggaacaggacttgtaccatgccatcgccactgtggccagcctt
ctcctccgcattggtgaggtggggaagaagttttcggccctgaccaccaagaagcccagg
gatggtgcccacagtggggatcacaacagtgccacagaagaggatgagccacccatatcc
aaactccatcaggacccagcacgggaatgccagccaccagctgcaggggatccgcaggcc
aaagccagtggcgacatgcatcttgggaaagcattgcaggacagtcacgtgatagtggag
ggaggcagcggcgaggggcagggctctccttccctgcttttgtctgatgatgaaaccaaa
gatgacatgtccatgtcctcctactcagtagtcagcacggggtccctgccgtgcgaggac
ctcacagaagacacagtgctggtgggaggagaagcctgcagccccactgccacctcacgg
atgggaggcaccgtggacatggattggtgcatttccttcgagcagatcctggcctccatc
ctgacagagtctgtgctagtgaacttctttgagaagagggtagacattggactcaagatc
aaagaccagaagaaagtcgaaaggcagttcagcacctccagtgaccatgagccccctggg
gtcttgggctga
DBGET
integrated database retrieval system