Rattus norvegicus (rat): 360588
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Entry
360588 CDS
T01003
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03440
Homologous recombination
rno03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
360588 (Brip1)
03460 Fanconi anemia pathway
360588 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
360588 (Brip1)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
360588 (Brip1)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
360588 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
360588 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
HBB
DUF1866
Motif
Other DBs
NCBI-GeneID:
360588
NCBI-ProteinID:
XP_006247125
RGD:
1307659
Ensembl:
ENSRNOG00000059997
UniProt:
A0A0G2K475
LinkDB
All DBs
Position
10:complement(71402035..71528083)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSSVLSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLTGKPVDEGLNKKPEAPSSCSCSCHSKNFTYSDTNLDTSPHFSSPSKPSSERNA
VSSPCRDSPERNSLAAKLSAKKHASIHEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHH
LDARLASEKRVKPESPIRKTSSSFQNPDGLCSRCCCSANQGINKESANTVKKDNGDQSKR
PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLD
GKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRKLKACPYYTARELIDSAD
IIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETASYSVTEVQLRFARDELD
SLINSNIRKKSHEPLRDVCYNLINWLETNSKNLVERDYESSCKIWSGNEMLLNLHRMGIT
AASFPVLQKHLSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFRKNSR
FADDYKVAIQQTYSWTNQIAIFDKNALLPVPKNKKHSRQKIGVNVLNFWCLNPAVAFSDI
NDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWVGTVGSGPKGRNLCAT
FQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTV
IAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITIG
IPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALI
LVDDRFNNNPDRYISGLSKWVRQQIQHHSTFASALESLTEFSKRHQKVTNRSKKEEKCTK
ENGSTLDVACLEGSTLTSVSEASHQTPENSLEEEAKVCVQEQRYPQMAAENPSGPSHGVS
RRKESDPGLREKSVQTMKTEKSEISRSSSPTFGKQTEPVNWPIFNSLKRHFNSKVKNRTP
VLKSSKNHASASSAFNKTALPLTGKCVSSSAPANTPLAPCPQSEVIIPSVKADTTPAKTH
CKQNEKDPSPDAELSPVTEEAKGSSSNPAVGTEVDDDSVCFTPELFDPVSTDEENSELVE
TDRSSNNSDCLSAEELFETVTGFGQK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgttgtctgagtacaccattggtggggtgaagattcactttccctgtaga
gcttatccagcgcagcttgctatgatgaattctattgtcagagggctaaacagtagccaa
cattgtttgttggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcaacagtctcttactgggaagccagtggatgagggcctgaataaaaagcct
gaagcaccatcttcgtgttcttgttcatgccattcaaagaattttacctacagtgacaca
aacctggacacttcacctcatttcagtagtccaagcaaaccatcttcggaaagaaatgca
gtctcatcgccctgtcgagactctcctgaaagaaatagtctggctgcaaagttatctgcc
aagaaacatgcgtccatacacgaggatgacgattttcaggtagagaagaaaagaatccga
cccttagaaacgacacagcagataagaaagcgtcactgtttggaaaaggatgtccaccat
ttagatgcacgactagcttcggaaaagagagtaaagcccgagtctccgatacgaaagacc
agctcctctttccaaaatcctgatggcctttgttccagatgctgttgctctgctaaccaa
ggaattaacaaagagtctgcaaacactgttaagaaagataatggggaccaatccaagaga
cctaaaatttactttgggacacgaacacacaagcagattgctcagattactagagagctc
cgtaaaacagcttactcaggggtcccgatgactattctttccagtagggaccatacctgt
gttcatcctgaagtagttggaaacttcaacagaaacgaaaagtgcatggaattgctggat
ggaaaacatgggaagtcctgctatttctatcatggcgttcacagaattagtaatcagcag
acattgcagtttcttcacggcatatccaaagcctgggacatagaagaacttgtcagcctc
gggaggaaactgaaagcttgtccctactatacagctcgagaactgatagacagtgccgac
ataattttttgcccctacaactacctcttagactcacaaataagggaaagtatggatata
aagctgaaagaacaagttgtcattttggatgaagctcataacattgaagagtgcgctcgg
gaaacagcaagctacagtgtaacggaagttcagctccggtttgctcgggatgagctagat
agtttgatcaacagtaatataaggaagaaaagccacgagcccctacgtgatgtgtgctat
aacctcatcaattggttagaaacaaattctaagaatcttgtagaaagggattatgagtcg
tcttgtaagatatggagtggaaatgagatgctcttaaacttacacaggatgggcatcacc
gctgcttctttccccgtcttgcagaaacatctctcagctgttcttcaaaaagaagaaaaa
gtcacatcaacccatggtaaagaggaggcaatacaaatacctattattagtgcatcaact
cagatcatgctcaaaggactcttcatggtacttgactatctcttcagaaaaaatagcaga
tttgcagatgattataaagttgctattcaacagacttactcctggacaaatcaaattgct
atttttgataaaaatgcgctcttgcctgtaccaaaaaataagaaacattcacgacagaaa
attggagttaatgtgctaaacttttggtgcttaaatccagctgtggccttttcagatatt
aatgacaaagtacggaccattgttctaacatcagggacgctgtcacccctgaaatccttt
tcatcggagcttggtgttacatttaacattcaactggaggccaaccatgtcatcagtaac
tcacaggtttgggttggtactgttggctcaggccctaagggtcggaacctctgtgctacc
ttccagcacactgaaacatttgagttccaggatgaagtgggaatgcttctgttgtctgtg
tgccagactgtgagccaaggaattttgtgctttttgccatcttacaagctattagagaaa
ttaagagaacgctggattttcacaggcttgtggcatagtttggagtcagtgaagacggtc
atcgcagaaccccaaggaggagaaaaaactgattttgatgaattgctacaggtgtactat
gatgctatcaagttcaaaggagaaaaggatggagcccttctcatagcagtttgtcgtggc
aaagtgagcgagggtctggatttctcagatgataatgcccgtgccgtcataaccatagga
attccttttccaaatgtgaaggatcttcaggttgaactaaaacgacagtacaacgaccac
cactcaaaattgagaggtcttttgcctggccgtcaatggtatgaaattcaagcatacaga
gccttaaatcaggctctaggcagatgtattcgacacaaaaatgactggggagctcttatt
ctagtggacgatcgcttcaataacaacccagaccgctatatatcgggactttctaaatgg
gtgaggcagcagatccagcaccactcaacctttgcaagtgccctggagtccctgaccgag
ttctccaaaagacaccagaaggttactaatagatccaaaaaggaggagaaatgtacaaaa
gaaaatgggtccactctggacgtggcctgtttggagggtagcactcttacaagtgtgtca
gaagcaagtcatcagacgccagaaaactctctggaagaagaagcaaaagtgtgtgtccag
gagcaacggtatccccagatggctgctgaaaacccctcaggaccaagtcatggcgtttcc
agaaggaaggaaagtgatccaggactaagagaaaaatctgttcagacaatgaaaacagaa
aaaagtgagatttcccggtcttcaagcccaacttttggaaagcaaacagagccagtcaac
tggcctatctttaattctctgaaacggcatttcaatagtaaagtaaaaaatcgcacaccc
gtgctcaagtcatcaaagaaccacgcctctgcttcttccgccttcaataaaactgccttg
ccactcacaggtaagtgtgtgtcctcaagtgcaccagcaaacacaccactagcaccttgc
cctcagtcagaagtcataattccatcagtgaaggctgacactactcctgctaagacccat
tgcaaacagaatgagaaagacccttccccggatgctgagctgtccccagtaactgaagag
gccaagggttccagttccaatccagctgttggaacagaagtagacgacgactctgtatgc
tttacacctgaactctttgatcctgtcagtacggatgaagaaaacagtgaactagttgaa
actgatagatccagtaataattcagattgtctttctgctgaagagctttttgaaactgta
actggatttgggcagaaatga
DBGET
integrated database retrieval system
