Rattus norvegicus (rat): 360797
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Entry
360797 CDS
T01003
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
360797 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
360797 (Rabgef1)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
360797 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
360797 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Motif
Other DBs
NCBI-GeneID:
360797
NCBI-ProteinID:
NP_001101803
RGD:
1307295
Ensembl:
ENSRNOG00000000895
UniProt:
G3V631
A6J0M5
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All DBs
Position
12:complement(32096338..32139949)
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AA seq
502 aa
AA seq
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MLSHSLVIRKKMSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQR
QIQEDWELAERLQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASS
RAGSKKEIQEAKAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLEAMPY
KRDLSIEEQSECTQDFYQNVAERLQTRGKVPPEKVEKMMDQIEKHIMTRLYKFVFCPETT
DDEKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLA
CITRCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMT
GEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPEACLGVKQ
MYKNLDLLSQLNERQERIMTEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQPLAA
IDSENVENDKLPPPLQPQVYAG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcactccttggttatcaggaagaagatgagcctgaagtccgaacgccgggga
attcatgtggatcagtcggagctcctgtgcaagaaaggatgtggttattatggaaaccct
gcctggcagggtttctgctccaaatgctggagggaggagtaccacaaggcccggcagagg
cagatccaagaggactgggaactagcagaacgacttcagcgggaggaggaagaggccttc
gctagcagccagagcagccaaggagcccagtccctcaccttctccaagtttgaggagaag
aaaaccaatgagaaaactcgcaaagtcaccacagtgaagaagttcttcagcgcctcttcc
agggctggatccaagaaggaaattcaggaagccaaagctcccagtccctccataaaccgg
cagaccagcattgagacggaccgagtgactaaggagttcatagactttctcaagaccttc
cacaagacaggccaagaagtctataaacagacgaagatgtttttggaagcaatgccttat
aaaagggatttaagcatcgaggaacagtcagaatgtactcaggacttttaccagaatgtg
gcggaaaggttgcagacccgcgggaaagtgcctccagagaaagtggagaagatgatggat
cagatcgaaaagcacatcatgacccgtctctataaatttgtgttctgcccagagacgact
gatgacgagaaaaaagatctcgccattcaaaagaggatcagggctctgcactgggtgaca
cctcagatgctctgtgtcccggtcaatgaggaaatcccggaagtgtctgacatggtggtg
aaagcgatcacagacatcattgagatggactcaaagcgtgtgcctcgggacaagctggcc
tgcatcaccaggtgtagcaagcacatcttcaatgccatcaagatcaccaagaatgagcca
gcctctgccgatgacttcctgcccacccttatctacatcgtcctgaagggcaacccccct
cgtctgcagtccaacatccagtacatcactcgcttctgcaaccccagccggctcatgacg
ggcgaggatggctactacttcaccaacctgtgctgtgctgtggctttcattgagaaacta
gacgctcagtctttgaatttaagtcaggaggattttgaccggtacatgtctggccagacg
tcccccaggaagcaagagtctgagagttggtccccggaggcctgcttaggtgtgaagcaa
atgtataagaacttggacctcctgtctcagctgaatgaacggcaggaaagaatcatgact
gaagccaagaaactcgaaaaagacttaatagactggacagatgggatcgccaaggaagtt
caagacattgttgagaagtaccctcttgagattaagcccccaaaccaacccttagcagcc
attgactctgagaatgtggagaacgacaagctccctccccctctgcagccgcaggtgtat
gcagggtga
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