Rattus norvegicus (rat): 360815
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Entry
360815 CDS
T01003
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
360815 (Ddx54)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
360815 (Ddx54)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
Pre-60S particles
Helicases
360815 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
360815
NCBI-ProteinID:
NP_001178477
RGD:
1562539
Ensembl:
ENSRNOG00000001377
LinkDB
All DBs
Position
12:complement(41595298..41610560)
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AA seq
874 aa
AA seq
DB search
MAAGRRVGLGPRSHPAMAPWKKKRLRKRRTGASQARDSDSEDGEFEIQAEDDARARKLGP
GRALPSFPTSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDSKLNEQLKTSFFLVREDTKTAVLLYLLQNVVRPQDQNVVFVATKHHAEYLTELLTGQ
GVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSVTLARPHEEPSSGAVGRDGVL
GRVPQSVVDDEDSSLQTALQASLELQGLQRVANNAQQQYLRSRPAPSPESIKRAKELDLA
ELGLHPLFSSCFEEGELQRLRLVDSIKNYRTRTTIFEINASSKDPSSQMMRAKRQRDRKA
ITSFHQGRQERQDGPADPVPQRELPQKEEEDMVETVEGVFTEVVGQKQPRPGPNQGAKRR
RKEASQRDQEFYVPYRPKDFDSERGLSVSGAGGAFEQQVAGAVLDLMGDEAQNMSRGRQQ
LKWDRKKKRFVGQSGQEDKKKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGPSN
RRGPGPHRGGKRGRSQGGQGRWYASSVPTGHMRSELKTKEQILKQRRQAQKQRFLQRGGL
KQLSARNRRRAQELRQSAFGRGAPTRKGKMRKRM
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcagacgtgtggggcttggcccgcggtcgcatcccgccatggctccgtgg
aagaagaagaggctgcggaaacgccgaactggggcttcccaggcccgcgacagcgattcg
gaggacggcgagttcgagatccaagcagaggatgacgcccgggcgcggaagctgggccct
ggcagagccttgccctcatttcccacctcagagtgcgtatcagatgtggagcctgacacc
cgagagatggtacgagcccagaacaagaaaaagaagaagtctggaggcttccagtccatg
ggcttgagctacccagtgttcaaggggatcatgaagaagggctacaaggtgccaacaccc
atccagaggaagaccatccccgtgatcttggatggcaaggatgtggtggctatggcccgg
acaggcagtggcaagacagcctgtttcctcctcccgatgtttgagcggctgaaggcacgc
agtgcacagacgggggctcgggccctcatcctctcacccacccgggagctggccctgcag
accatgaagttcactaaagagctaggcaagttcactggcctcaagactgccttgatcctg
ggtggagacaaaatggaagaccagtttgcagccctgcacgagaaccctgacataatcatt
gccacccctgggcggctggtgcatgtcgctgtggagatgaacttaaagctgcagagtgtg
gagtatgtggtttttgatgaagcagacaggctctttgaaatgggctttgctgagcagcta
caggagatcataggccgccttcctgggggccaccagacagtgctgttctcagccacactg
cccaaactgctggtggaatttgcacgagcaggcctcacagagcccgtgctcatccgcctg
gatgtagactccaaactcaatgaacagctcaagacttccttcttccttgtgcgtgaggac
accaagactgctgtgctcctctacctgctacagaatgtcgttcggccccaggaccagaac
gtggtgtttgtagccacgaagcaccacgcagagtacctcacagagttgctgacgggccag
ggtgtgagctgcgcccacatctacagtgccttggaccagacggcccgcaagatcaacttg
gccaagttcacacacaacaaatgttccacccttatcgtgactgacctggctgcccggggc
ctggacatcccactgctggacaacgtcatcaactacagcttccctgccaagggcaagctt
tttctacaccgagtgggccgagtggccagagcaggccgaagtggcacagcctattccctg
gtggccccagacgaagttccctacctgctcgaccttcacctgttcctgggccgctctgtc
accctagcccggcctcatgaggaaccttcttcaggtgcagttggcagggatggtgtgctg
ggtcgggtgccacagagtgtagtggatgacgaggacagcagcctgcagaccgccctgcag
gcgtcactggaacttcagggtctgcagcgtgtggccaacaatgctcagcagcagtacctg
cgctcgcgtccggcaccctcaccggagtccatcaagagagccaaggaactggacctggca
gagctgggcctgcacccactcttcagctcgtgctttgaggagggagagctccagcgcctg
aggctggtagacagcatcaagaactatcgcacacgcacaaccatcttcgagatcaatgcc
tccagcaaagacccaagcagccagatgatgcgtgccaagcggcagagggaccggaaagct
attaccagctttcatcaggggcggcaggaaaggcaggacggcccagctgacccagtccct
cagagggagctgcctcagaaggaagaggaggacatggttgagactgtggagggtgtcttc
acagaggttgtgggccagaaacagccaaggccaggacccaaccaaggagccaagaggcgg
aggaaggaggccagtcagcgagaccaggaattttatgtcccctaccggcccaaggatttc
gacagtgagcgggggctgagtgtcagtggggctggaggggcctttgagcagcaggtggcc
ggtgccgtccttgatctgatgggggatgaagcccagaacatgagccgagggcggcagcag
ctcaagtgggaccggaagaagaagcggtttgtggggcagtcaggccaagaggacaagaaa
aagatcaagacagagagtggccggtttatcagcagctcttacaagcgcgacctctaccag
aagtggaagcagaagcagaaaattgatgaccgggactccgaggaagaaggaccatccaac
cggcgaggccctgggccccacagaggtggaaagcgaggtcgtagtcaaggtgggcagggc
aggtggtatgcttccagtgtacccacaggccacatgcgctccgaactcaagaccaaggaa
cagatcctcaagcagcgccgtcaagcccagaagcagcgcttcctgcagcgagggggcctg
aagcagctttcagcacgcaaccgccgccgagcccaggagttgcgccagagcgcctttggc
cggggtgctcccaccaggaagggcaagatgaggaaaaggatgtaa
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