Rattus norvegicus (rat): 360817
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Entry
360817 CDS
T01003
Symbol
Med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
360817 (Med13l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
360817 (Med13l)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
360817 (Med13l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
360817
NCBI-ProteinID:
NP_001406720
RGD:
1305884
Ensembl:
ENSRNOG00000001120
LinkDB
All DBs
Position
12:complement(43468556..43665819)
Genome browser
AA seq
2206 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYVINEEHLHMAQSSPAPFQVLVSPYGLNGTLTGHAYKMSDPAARKLIEEWQ
CFYPMVLRKKEEPREEAELEYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSGTS
AGGHVTIAQQGLGSVKDPSNCGMPLTPPTSPEQVVIGESGVQSAASHLGSHDGGMIATHS
PKRSKKIPPKLHSHMVHRVWKECILNRAQSKRSQMSAPAGEEEPAHSPAAWDFVDPTQRV
SCSCSRHKLLKRCAVGPSRPPTLSQPGFSAGPPPPSSLPPPASSKHKTTERQEKGDKLQK
RPLVPFHHRPSVAEELCMEQDAPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMD
LNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLDLQQLSALEDRTVL
VGQRLPLMAEASETALYSGLRPSYTESSDRWWQSFRLPPSEDAEFRPPELQGEGFHTVLD
VSPESTALQRLLAQPNKRFKIWQDEQPQVQPLPFLDPSPLSQQPGDTLGEVNDPYTFEDG
DIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATKT
DVRQDNAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTEE
RPPGKDGRAAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVSSETVTALGMLESP
VVSMVPTHLTEFRMEVEDGLGSPKPEDIKDFSYVHRVPQFQPFVGSSMFAPLKTLPSHCL
LPLKTPDACLFRPSWAVPPKMEQLPMPPAASSIRDGYNNVPSVGSLADADYLNTPQMNTP
VTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGS
PASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNVFKDRNFDSCCICACNMNVK
GADVGLYIPDSSKEDQYRCTCGFSAIVNRRLGYNSGLFLEDELDIFGKNSDIGQAAERRL
MMCQTSCQSTLLPQVEGARKAPEPPVSLLLLLQNQHTQPFASLSFLDYISSSSRHALPCV
SWTYDRVQADNNDYWTECVNALEQGRQYVDNPTGGKVDEALVRSATVHCWPHSNVLDTSM
LSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESP
EPLPIPTLLVGYDKEFLTISPFSLPFWERLLLEPYGGHRDVAYIVVCPENEALLEGAKTF
FRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTEELVSEWFNQPWSSEESDNHS
RLKLYAQVCRHHLAPYLATLQLDSGLLMPPKHQSPPAEAQGQATPGNAGSSSSGSGAPPA
GSAFNPTSSSSAASSSSSCSGPPGSSATSAPGITQMSTTSSSGFSGGVGGQNPSAGGSST
DGTPGNVACGDAEHAQSCAQPSQDGQDSVTERERIGIPTEPDSADSHAYPPAVVIYMVDP
FTYTAEEDSSSGNFWLLSLMRCYTEMLDHIPEHMRSSFILQIVPCQYMLQTVKDEHVFYI
QYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPFILAP
IKDKQTEPGEAFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIALPSRS
RKSKVSARKIGLQKLWEWCLGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECSLQTI
SKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNMQSSQ
LNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIGILMT
GNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYFVSTA
KAENLPQWFWSSCPQARNQCPLFLKASLHHHISVAQTDELLPVRNSQRAPHPLDSKTTSD
VLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNML
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcggcgaactgggtggcgaacggggcgagcctggaggattgtcactctaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgtctgcaagccaacctgctctgtgtatggcgtcgtgacgtcaagccggattgc
aaagagctctggatattctggtggggagacgaacccaacctggtgggagtaatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaagcaatccacaatctgttagaaaggtgcctaatggataagaacttcgtg
aggatcgggaagtggtttgtgcggccctatgacaaggatgaaaagccagtcaacaaaagt
gagcatctgtcctgtgctttcaccttctttcttcatggagagagtaacgtgtgcacaagc
gtggagatcgctcagcaccagccgatctatgtgatcaacgaggaacacttacacatggcc
cagtcttcaccagcaccatttcaagtgctggtgagtccttacggcttaaatggcacgcta
acagggcatgcatacaagatgtctgacccagcagcccgcaagctgattgaagaatggcag
tgtttctacccaatggtgctgaggaagaaggaggagcctcgagaggaggccgagctggaa
tatgacgatgactttcccgtggcagttgaagtcattgtcggtggtgtccggatggtctac
ccttcggctttcgtgttgatctctcagaatgatatcccggttcctcagagtggtaccagt
gctggagggcatgtcaccattgcacagcaggggctcggtagtgtgaaagaccccagtaac
tgtgggatgcctctgacgcctcccacctccccagagcaagtggttataggcgagagcggt
gtgcagagcgctgccagtcacctcgggtcccacgatggggggatgatagccacccacagt
ccaaagagatcaaagaagatccctcctaaactccacagtcacatggtccatcgagtctgg
aaggagtgcatccttaacagggcccagtctaagaggagccagatgtcagcgcctgctggg
gaggaagagcccgctcacagtcctgctgcctgggactttgttgacccaacccagagagtc
agctgctcctgctccaggcataaacttttaaagcggtgtgcagtaggacccagccgacct
cccacgctctctcagccaggcttcagtgcaggaccgccacccccttcatccttaccacct
cctgcttcttccaagcacaagaccacagaaagacaagaaaaaggagacaagttgcaaaag
agacccttggtgcccttccaccacaggccttctgtggctgaagagttatgcatggagcag
gatgcacctggacagaagctagggctggcagggatagactcttccttagaggtgtcaagc
agtcggaagtatgataagcaaatggccgtgccttccagaaacacaagcaagcaaatggat
ctgaatcctatggattcacctcactcccccatttcccctctgccccccaccctcagccct
cagccacgaggtcaggagacagagagtttggacccaccttctgtccctgtgaaccctgcc
ctctatggaaacgggctagaccttcagcagctctccgctctagaggacagaactgtcctt
gtaggccaaagactgcctctgatggcagaggccagtgagacagccttgtacagtgggctc
aggccttcatacactgagtcgtcagacaggtggtggcagagttttcgtctcccacccagt
gaggatgctgagttccggcctccagagctgcagggggaggggtttcacactgtactggat
gtgagccccgagagcactgccctgcaaagactcttagcacaacctaacaagcggttcaaa
atctggcaggatgagcagcctcaggtgcagccgctccccttcctggacccatcacctctg
tcacagcagcctggagacactctgggagaagtcaatgacccatacacctttgaggatggt
gacataaagtacatcttcacagcaaataagaaatgcaagcaggggacggagaaggactcc
ctgaaaaagaacaagtcagaggatggatttggtaccaaggatgtcactacaccaggtcat
tccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaaaca
gatgtccggcaggacaacgctgctggcagagctggctccgggagccttacccaagtgaca
gatctggccccttctctgcacgacttagacaacatctttgataactctgatgacgacgag
cttggggccgtgtcccctgctctccgctcatctaagatgccgactgttgggactgaggag
cggccccctgggaaggacggaagagctgctggcccttaccctccaacagttgcagacttg
caaaggatgttccccacccctccatcattggaacagcatcctgcattttccccggtgatg
aattacaaagatggagtgagttcagagacagtgactgcattgggcatgctggagagccct
gtggtcagtatggtccccacacacctcacggagttccggatggaagtggaagatggctta
ggaagtcccaagccagaggacataaaggacttttcctacgtgcacagagtgccgcagttc
cagcctttcgtgggctcttctatgtttgctccactgaagacgctgccaagccattgcctg
ctgcctctgaagacaccggatgcctgtctgttccggccctcatgggcggttcctccgaaa
atggagcagctgcccatgccccctgcagcctcttccattagagacggctacaacaatgtg
cctagtgttgggagcctcgcagatgcagactatctgaacacaccccagatgaacacccct
gtgacgctcaacagcgctgcccctgccagcaacagtggagccggggtccttccatctcca
gctacccctcgattctctgtgcccacacctcgaacccccaggactccaagaactcccaga
ggtgggggcactgctagtggccaagggtctgtgaaatacgatagcaccgatcaggggtca
ccggcttccaccccctctaccacaaggccccttaactctgtggagcctgccaccatgcag
ccaattcctgaggcccacagtctctatgtcaccctgattctgtcagattccgtgatgaat
gtcttcaaggacaggaactttgatagctgctgcatttgcgcctgcaacatgaacgtcaag
ggggcagatgtcgggttgtacatccccgactcctccaaggaggaccagtaccgttgcacc
tgtggcttcagtgcgatcgtgaaccggagacttggttacaactcggggctgttcctcgaa
gatgagctggatatttttgggaagaactctgacattggccaagctgcagagagacgcctg
atgatgtgccagacctcctgccaatccaccttgcttcctcaggtggagggcgcccggaaa
gccccagagccccccgtaagcctcctcctcctcctccagaatcagcacacacagcccttc
gcctctctcagctttctggattacatctcctccagcagccgccatgcacttccctgtgtg
agctggacttatgaccgggtgcaggcagataacaatgactactggacagagtgcgtcaat
gcattggagcaggggaggcagtacgtggataaccccacaggcgggaaagtggacgaggcg
ctggtgagaagtgccaccgtacactgttggccgcacagcaatgtgctggacacgagcatg
ctctcatcccaagatgtggtgcgcatgctgctgtccctgcagcccttcctacaagatgcc
atccagaagaagcgcacaggcaggacctgggagaacatccagcacgtgcaggggccactc
acctggcagcagttccataagatggccgggcgtgggacctacggttcagaagagtctcct
gagccactgcccatccccacgctgctggtgggctacgacaaggagttcttgaccatctca
cccttctccttgcccttctgggagaggctgctcttggagccctatgggggccaccgcgat
gttgcttacattgtggtgtgtccagaaaacgaggccttgctcgaaggagccaaaactttc
ttcagggacttgagtgctgtatatgagatgtgtcggctggggcaacacaagcccatctgc
aaagtactccgtgacgggatcatgcgtgtgggcaagaccgtggcacagaagctgacagag
gagcttgtgagcgagtggtttaaccagccgtggagcagtgaggagagtgacaatcattcc
agactcaaactttatgctcaagtttgccgccatcacctagcaccttatttagccactctg
cagcttgacagtggcctgctgatgccacctaagcaccagagcccaccagcagaagcacag
ggacaagccacgcctgggaatgctgggtcttcaagttcaggctcaggagcgcctccagct
ggcagtgcattcaaccccacatccagcagctctgcagcaagtagttcatcctcctgctct
gggccgccgggctcctcagccacctctgctccaggcatcactcagatgagcactacctct
tcttcaggattcagtggtggggttggagggcagaaccccagtgctgggggcagctccaca
gatggaaccccagggaacgtggcttgtggagatgctgagcatgcgcagagctgcgcccag
ccctcacaggacggacaagacagtgtcacagagagggagagaataggaatccccacggag
cccgactctgcagacagccatgcctaccctccagctgtcgtcatttacatggtggacccc
ttcacctacactgcagaggaggactccagctccggaaacttctggctgttgagcttgatg
cgctgctacacggagatgctggatcacatccccgagcacatgagaagctcgttcattctc
cagattgtgccttgccagtacatgctgcagacagtgaaggatgaacacgtcttctatatt
cagtacttgaagtccatggcgttttcagtgtactgccagtgcaggcggcctctgcctaca
cagatccacatcaaatccctcacgggctttgggcctgcagccagcattgagatgaccctc
aagaacccggagcggcccagtccaatccagctttattcccctccctttatattggcccca
atcaaagacaagcagacagagccgggagaggccttcggtgaggcgagccagaagtacaac
gtgctgttcgtgggctactgtctgtctcatgaccagcgctggctcttggcgtcctgcact
gacctgcatggggagttactggagacctgtgttgtaaacattgctttaccaagcaggtca
cggaagagcaaggtgtctgcacgtaagatcgggctgcagaagctgtgggaatggtgcctg
gggattgtccagatgacatctctgccctggagagttgtcattggccgcttggggcggctt
ggccatggggaactgaaagattggagtatcctccttggagaatgttcactgcagacaatc
agcaaacagctcaaggatgtgtgccgcatgtgtgggatctctgctgcagactctccttct
atcctcagtgcctgcctggttgccatggagccccaggggtcctttgtagtgatgccagat
gctgttacaatgggctctgtgtttggccgaagcactgcgttgaacatgcagtcgtcccag
ctgaacacacctcaggatgcctcctgcacccacatcctggtgttcccgacatcgtcaacc
atccaggtggctccagccaactaccccaatgaggatgggtttagccccaacaatgatgac
atgttcgtagaccttccatttccagacgacatggacaatgacattggcatcctcatgacc
gggaacctccactcctctcccaactcctctccggttccctctccgggctctccctctgga
atcggggtgggctctcacttccagcacagtcggagccagggagagcggcttctgtcccgg
gaggctccagaggagctcaagcagcagcccctggcccttgggtattttgtatcaactgcc
aaagctgagaacctcccgcagtggttttggtcatcatgcccgcaggcccggaaccagtgc
ccactcttcctgaaggcctcactccatcaccacatctctgtagcacagaccgacgagctc
cttcctgtcaggaactctcagcgggctccacaccctctggactccaagaccacatctgat
gttctaaggtttgtgctggagcagtacaatgccctgtcctggctcacgtgcaatccggcc
acccaggaccgtacttcctgccttcccgtccactttgtggtgctcacgcagttgtacaat
gccatcatgaacatgctctaa
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integrated database retrieval system