KEGG   Rattus norvegicus (rat): 360860
Entry
360860            CDS       T01003                                 
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04115  p53 signaling pathway
rno04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    360860 (Cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    360860 (Cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    360860 (Cop1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     360860 (Cop1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    360860 (Cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     360860 (Cop1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF4 DSE1_N ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 PAC11 WDR90_beta-prop_4th Beta-prop_WDR41 ThsA_Macro
Other DBs
NCBI-GeneID: 360860
NCBI-ProteinID: NP_001020297
RGD: 1304773
Vega: OTTRNOG00000000163
UniProt: A0ABK0LP32 Q5BJY0
LinkDB
Position
13:73954058..74095283
AA seq 433 aa
MSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGPSQTKKQPWYNSTLASRRK
RLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLY
NGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISW
SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV
KLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGH
RKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACG
SENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIA
ANSQGTIKVLELV
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagtggcttgtactcccccgtcagtgaagatagcacggtgcctcaatttgaagctcct
tctccatcgcacagtagcattattgactctacagaatacagccaacctccaggcttcagt
gggccgtctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaag
cgactcactgctcattttgaagacttagagcagtgttatttttctacaaggatgtctcgt
atctcagatgacagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaaa
tttactcgatataactctgtaagaccgttggccacattgtcttatgctagtgatctgtat
aatggttccagcatagtttctagtattgaatttgaccgggattgtgactactttgcaatt
gctggagttacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagtg
gatattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttgg
agtagttaccataagaacctgctagccagcagtgattatgaaggcaccgttatactatgg
gatggattcacaggacagaggtcaaaggtctatcaggagcatgaaaagaggtgttggagt
gtcgactttaatttgatggatcccaaacttctggcttcaggttctgatgatgcaaaagtg
aagctttggtccaccaatttagacaattctgtggcaagcatcgaggcaaaagctaatgtg
tgttgtgtgaagttcagcccctcctccaggtaccatctggcttttggctgtgcagatcac
tgtgtccactactacgatcttcgtaacactaaacagccaataatggtgttcaaggggcac
cgaaaagcagtgtcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaaca
gacagccaactaaaactgtggaatgtggggaaaccatactgtctacgttccttcaagggt
catattaatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtgga
agtgagaacaactccctctacctgtactataaaggactttctaagactttgctaactttt
aagtttgatacagttaagagtgtattagataaagaccggaaagaagatgacaccaatgaa
tttgtcagtgctgtgtgttggcgggcactatcagatggggagtccaatgtgctgattgct
gctaacagccagggtacaattaaggtgctagaattggtataa

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