Rattus norvegicus (rat): 360937
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Entry
360937 CDS
T01003
Symbol
Tbc1d1
Name
(RefSeq) TBC1 domain family member 1
KO
K18341
TBC1 domain family member 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
360937 (Tbc1d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
360937 (Tbc1d1)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
360937 (Tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
360937 (Tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
360937 (Tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3350
PID
ER
Motif
Other DBs
NCBI-GeneID:
360937
NCBI-ProteinID:
NP_001414246
RGD:
1304562
Ensembl:
ENSRNOG00000002180
LinkDB
All DBs
Position
14:complement(44289241..44489246)
Genome browser
AA seq
1257 aa
AA seq
DB search
MEAITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQCSKKEPG
MKQVRLWVSPSGLRCEPDLRKSQPWDPLICSSIFECKPQRVHKLIHNSQDPSYFACLIKE
DAAHQQSLCYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFNHVSCGRRIDWDAPTGQPSAPGARPMRKSFSQPGLRSLAF
RKEFQDASLRSSTFSSFDNDIENHLIGGHNVVQPTDMEENRTMLFTIGQSEVYLISPDTK
KIALEKNFKEISFCSQGIRHVDHFGFICRECSGGGGAGFHFVCYVFQCTNEALVDEIMMT
LKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQ
AMIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHSHTGEPKQTLQVAAENIGSELPP
SASRFRLDSLKNRAKRSLTESLESILSRGNKARGLQDHSASVDLDSSTSSTLSNTSKELS
MGDKEALPISESSFKLLGSSDDLSSDSESHIAEESALLSPQQAFRRRANTLSHFPVECPA
PPEPAQTSPGVSQRKLMRYHSVSTETPHERNVDHLPGGESRCCPGQPSDPPPLPPRLNPS
ASSPNFFKYLKHNSSGEQSGNAVPKSVSYRNALRKKLHSSSSVPNFLKFLAPVDENNTCD
FKNTNRDFESKANHLGDTDGTPVKARRHSWRQQIFLRVATPQKACDSPSRYEDYSELGEL
PPRSPLEPVCEDGPFGPVQEEKKKTSRELRELWKKAILQQILLLRMEKENQKLQASENDL
LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKVHSAVGQGVPRHHRGEIWK
FLAEQFHLKHPFPSKQQPKDVPYKELLKKLTSQQHAILIDLGRTFPTHPYFSAQLGAGQL
SLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMI
ILQIQMYQLSRLLHDYHRDLYNHLEEYEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIF
LQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTISQVFEMDIA
KQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANARIQSL
EVTVEKLLTSESKLKQAVLTLEMERSALLQMVEELRRQMAQPSTAEPDCTRLEPTGD
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatcacattcacagcgaggaagcatccgttccctaacgaggtttcggtggac
ttcggcttgcagctagtgggctccttacccgtgcattctctcactacaatgcccatgctg
ccgtgggtggtagccgaggtacgaagactcagtggccagtgctccaaaaaggagcctggg
atgaagcaagtccgcctttgggtttcgccctccggactacggtgcgaacctgacctgagg
aaaagtcaaccgtgggaccccctgatctgttccagcatctttgagtgcaagcctcagcgt
gttcacaaactgattcacaacagtcaggacccgagctacttcgcttgtctcattaaggag
gacgctgcccaccagcagagcctctgctatgtatttaaagcagatgatcaaacaaaagtg
cctgagatcattagctccatccggcaggcagggaagattgcccgccaggaagagctgcgc
tgcccctcggagttcgatgacaccttcgccaaaaagtttgaggtgctcttctgtggccgg
gtcactgtggcccacaagaaggcaccacctgcactgatcgacgagtgtatcgagaagttc
aaccatgtgagctgtggccgcagaatagactgggatgcgcccacggggcaaccatcagcg
cctggggcccggcccatgcgcaaatccttctcacagcctggactgcgctcgctggccttc
aggaaggagttccaggatgctagcctccgcagtagcacctttagctccttcgataacgac
atcgaaaatcacctaatcggcgggcacaatgtagttcagcccacagacatggaggagaac
cgaactatgctcttcacgattggccaatctgaagtttacctcatcagtcctgacaccaaa
aagattgcattggagaaaaattttaaggagatatccttttgctctcagggcatcaggcac
gtggaccactttggatttatctgccgagagtgctcaggtggcggtggcgccggctttcat
tttgtctgttacgtgttccagtgcacaaatgaagctctggttgacgagatcatgatgact
ctgaagcaggctttcacggtagctgcagtgcagcagactgctaaggcaccagcccagctg
tgtgagggctgccccttgcagggcctacacaagctctgcgagaggatagagggaatgaat
tcatctaaaaccaaattagaactccagaagcacctgaccacactgaccaatcaggagcag
gcaatgatatttgaggaagttcagaaattgagaccaagaaacgagcagcgagagaatgaa
ttaattatttcttttctgaggtgtttatacgaagagaaacaaaaggaacacagccatact
ggggagccaaagcagacactgcaggtggcagcagagaatattgggagtgaactaccaccc
agtgctagccggttcaggttagattcactgaagaacagagcaaagaggtccttaacagag
tccttagagagcattctgtcccggggcaataaagccaggggccttcaggaccattccgcc
agtgtggatctggacagctccacttctagtactctaagtaacaccagcaaagagctgtcc
atgggtgacaaggaggccttgcccatctctgaaagctccttcaaactccttggctcctca
gatgacctatccagtgactcagagagccacattgcagaagagtctgctctgttgtcaccc
cagcaggcattcagaaggagagccaacaccctgagtcatttcccagttgagtgccctgca
cctccagaacctgcccagacctctccaggggtgtctcaaagaaaactcatgcggtatcac
tccgtgagcacagagacgcctcatgaacgcaatgtggaccatcttcctgggggtgagtct
cggtgctgcccagggcagccttcagatccgcctcctcttccccctcgtcttaacccttcc
gcctcctcaccaaacttttttaagtacctaaaacacaattccagtggagaacagagtgga
aatgctgtgccaaaaagtgtctcctaccgtaatgccctgcggaaaaaactccattcttcc
tcttctgtgccaaattttctaaaatttctggctcctgtagatgaaaataacacctgtgac
tttaagaacacaaacagggactttgaatccaaagcaaaccacctgggtgacacagatggg
accccagtgaaggcccggcggcattcatggagacagcagatattcctccgagtggccact
ccacagaaggcttgtgattctccaagcagatatgaagattattcagagctgggagagctc
cctccacgttcccctttagaaccagtgtgtgaagatggaccatttggtccagtacaagag
gagaagaagaaaacgtctcgtgagcttagagagctgtggaaaaaggccatcttgcagcag
atcctgctgctgaggatggagaaggagaaccagaagctacaagcctctgagaatgatttg
ctgaacaaacgcctgaagcttgattatgaggaaatcactccttgtcttaaagaagtaact
acagtgtgggaaaagatgcttagcactccaggaagatccaaaattaagtttgatatggaa
aaagtgcactcagctgttgggcaaggtgtgccacgtcatcaccggggtgagatctggaag
tttctagctgagcagttccaccttaaacatccatttcccagtaaacagcagccaaaggat
gtgccctacaaagagctcttgaagaagctgacctcccagcagcacgccatcctcattgac
ctcgggcgaacctttccaacacatccatacttctctgcccagcttggagcaggtcagctg
tcactttacaacattctgaaggcctactcacttctggaccaggaagttggatactgtcaa
ggtctcagcttcgtggcaggcattttgctccttcatatgagtgaggaagaagcattcaag
atgctcaagttcctgatgtttgacatggggctgcggaaacagtatcggccagacatgatt
attttacagatccagatgtaccagctgtcacggctcctccatgattaccacagagacctc
tacaaccacctggaagagtatgagatcggccccagcctctacgcagctccctggtttctc
accgtgttcgcctcacagttcccacttggctttgtagccagagtctttgatatgatcttc
cttcagggatcagaggtcatatttaaagtagctttaagtcttttggggagccataaaccc
ttgattctgcagcatgagaacctggaaaccatagtggacttcataaagaacacactcccc
aacctaggcttggtgcagatggagaagaccatcagtcaggtgtttgagatggacatcgcc
aaacagctacaagcctatgaggttgagtaccatgtgctccaagaagaacttattgattcc
tctcctctcagtgacaaccaaagaatggataaattggagaaaaccaatagcagcttgcgc
aaacagaaccttgacctcctggaacaattgcaggtggcaaatgctaggatccaaagcctc
gaagtcacggtggagaagcttcttaccagcgagagtaagctgaaacaggctgtgctgacc
ctggagatggagcgctccgccctgctgcagatggtggaggagctacggaggcaaatggcc
cagcccagcactgcagagccggactgcacccggctggaacctacaggtgactga
DBGET
integrated database retrieval system