Rattus norvegicus (rat): 360992
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Entry
360992 CDS
T01003
Symbol
Pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
360992 (Pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
360992 (Pnpt1)
03016 Transfer RNA biogenesis [BR:
rno03016
]
360992 (Pnpt1)
Enzymes [BR:
rno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
360992 (Pnpt1)
Messenger RNA biogenesis [BR:
rno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
360992 (Pnpt1)
Transfer RNA biogenesis [BR:
rno03016
]
Prokaryotic type
tRNA degradation factors
360992 (Pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Gp18_dom_I
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-GeneID:
360992
NCBI-ProteinID:
NP_001135843
RGD:
1307987
Ensembl:
ENSRNOG00000003600
UniProt:
G3V6G7
A6JQA4
LinkDB
All DBs
Position
14:107078486..107109628
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AA seq
784 aa
AA seq
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MAACRPCCLCLCLRPLSCGPLGRPRRHRALSYLQVRALWSGTRSRAVTVDLGHRKLEISS
GKLARFADGCAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDILAINGASAALSLS
DIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGVKYTQQIIQSIQQLVKEIGVAKRTPQKIFTPSAEIVKYTHTIAMEKLYAVFT
DYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQLEIIESFNVVAKEVFRSIILNEYKRCD
GRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAINGVKD
KNFMLHYEFPPYATNETGKVTGVNRRELGHGALAEKALCPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAVGLVTKSNPEKGEIEDYRLLTDILGIEDYN
GDMDFKIAGTNKGITALQADIKLPGVPVKIIMEAIQQATVAKREILQTMSKTISKPRASR
KENGPVVETVKVPLSKRAKFIGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPTAMHEA
RDFITEICRDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNSQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVLKTLNDRSSIVMGEPISQSSS
NSSP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttgcaggccgtgctgcttgtgcctgtgtctccgaccgctgagctgcggtccc
ctcggccggccaaggcggcatcgtgcactcagctatttgcaggtgcgagcgctgtggagc
ggcacccggtccagagcagtgactgtggacttgggacacagaaaattagaaatatcctct
ggaaaactggcaagatttgctgatggctgtgctgtggtacagtcaggtgatactgcagta
atggtcacagcggtcagcaaaacaaaaccttcaccttcccaattcatgccattggtggta
gactacagacagaaggctgctgcagcaggtagaatccccacaaactaccttagaagagag
attggctcttctgacaaagagattcttacaagtcgagtaatagatcgttcaattcgacct
ctctttcctgctggctatttttatgatactcaggttctctgtaatctgctagcagtagat
ggcatcaatgaacctgatatcttagcaattaatggcgcttctgcagctctctccttatca
gatatcccttggaatggacctgttggggcagtacgaataggaatgatcgatggagaatgt
gtcgttaacccaacaaggaaagaaatgtcttctagcaccttaaatttagtagttgctgga
gcacctaaaagccaaattgttatgttggaagcctctgcagaaaacattttacagcaggac
ttttgccatgctatcaaagtcggggtgaagtatacgcagcagataattcagagcatccag
cagttggtaaaagaaatcggtgttgccaagaggacaccccagaagatatttactccttct
gcagagattgtgaaatacacgcatacaatcgccatggagaaactctatgcagtttttaca
gattatgaacatgataaagtttccagggatgaagctgttaacaagataagattagataca
gaggaacatctaaaggaaaaatttccagaggttgaccaacttgaaataatagaatccttc
aacgttgttgcaaaggaggttttcagaagtattattttgaatgaatacaaaaggtgtgat
ggacgagatctgacttcacttaggaatataagttgcgaggtagatatgtttaaaacactt
catggatcagcattatttcagagaggacaaacacaggtactctgtactgttacatttgat
tcattagaatccagtattaaatcagatcaaattataacagctataaatggggtaaaagat
aaaaatttcatgttgcactatgagtttcctccttatgcaaccaatgaaactggcaaagtt
actggtgtaaatagaagagaacttggacatggtgctcttgctgagaaagctttgtgtcct
gttattcccaaagattttccttttaccataagagttacatctgaagttctcgagtcaaac
gggtcatcttctatggcatctgcatgtggtggaagtttggcattaatggatgcaggggtc
ccaatttcatctgctgttgcaggtgtagcagtgggattggttaccaaaagcaatccagag
aaaggtgaaatagaagactatcgtttgctaacagatattctgggaattgaagattacaat
ggtgacatggatttcaaaatagctggtacaaataaaggaataactgcattacaggctgat
attaagttacctggagtaccagttaaaattataatggaagccatccaacaagcaacagtg
gcaaagagggaaatattgcagacaatgagcaaaacgatttcaaaacctcgagcatctagg
aaagaaaatggaccagttgtagaaacagtaaaggttccattatcaaaacgagcaaaattc
attgggcctggtggatatcacttaaaaaaactccaggctgagacaggtgtaacaattagt
caggttgatgaagaaacattctccatatttgcaccaacacctactgcaatgcatgaggca
agagacttcattacagaaatttgcagagatgatcaagagcaacaattggaatttggagca
gtttataccgctacaataactgaaatcagagacacaggagtaatggtaaaactgtatcca
aacatgactgcagtgctacttcataattcacaacttgaccaacgaaagattaaacatccc
actgccctgggattagaagttggccaggaaattcaggtcaaatactttggccgtgatcca
gctgatggaagaatgaggctttcccgtaaagtacttcagtctccagctacaactgttctc
aaaactctaaatgataggagcagcattgtaatgggagagcctatttcacagtcatcatct
aactcttccccttga
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