Rattus norvegicus (rat): 361213
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Entry
361213 CDS
T01003
Symbol
Sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00600
Sphingolipid metabolism
rno01100
Metabolic pathways
rno04071
Sphingolipid signaling pathway
Module
rno_M00094
Ceramide biosynthesis
rno_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
361213 (Sptlc1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
361213 (Sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rno01007
]
361213 (Sptlc1)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
361213 (Sptlc1)
Amino acid related enzymes [BR:
rno01007
]
Aminotransferase (transaminase)
Class II
361213 (Sptlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
361213
NCBI-ProteinID:
NP_001101876
RGD:
1307140
Ensembl:
ENSRNOG00000010882
UniProt:
D4A2H2
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All DBs
Position
17:12029189..12068234
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AA seq
473 aa
AA seq
DB search
MATVAEQWVLVEMVQALYEAPAYHLILEGILILWIIRLVFSKTYKLQERSDLTAKEKEEL
IEEWQPEPLVPPVSRNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAA
AFASLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTIASAIPAYSK
RGDIVFVDSAACFAIQKGLQASRSDIKLFKHNDVADLERLLKEQEIEDQKNPRKARVTRR
FIVAEGLYMNTGTICPLPELVRLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGISIDDI
DLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENP
GIFAVLKKKCQTIHKSLQGVSGLKVVGESLCPALHLQLEESTGSRERDMKLLQEIVEQCM
NKGIALTQARYLDKEEKCLPPPSIRVVVTVEQTDEELQRAAATIREAAQAVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtggcggagcagtgggtgctggtggagatggtgcaggcgctgtacgaggct
ccagcataccatctaattctggaaggaatcctcatactttggataatcagactcgttttc
tctaaaacttacaagttgcaggagcgttctgaccttacagccaaggaaaaggaagaactg
attgaagaatggcagccagagcccctcgtccccccggtctccaggaaccatcctgctctc
aactacaacatcgtctccggccctccaacccataacatcgtggtgaacggaaaagagtgt
gtcaactttgcctcctttaatttcctcgggttgctggccaaccctcgggttaaggctgcg
gcttttgcatcattaaagaagtacggcgtgggtacctgtggtcccagagggttttatggc
acatttgatgtccatctggatttggaagagcgcctggcaaagtttatgaagaccgaagaa
gctatcatttactcctatggcttctccaccatagccagtgcgattcctgcgtactctaag
agaggggacattgtttttgtggacagtgcagcctgctttgctatccagaaaggactacag
gcatcacgcagtgacattaagttattcaagcacaatgacgtagctgacctggagcgactg
ctaaaagaacaagagattgaagatcaaaagaatcctcgaaaggcccgtgtgactcggcga
ttcatcgtcgcggaaggattgtatatgaacactggaaccatctgccctcttccagaactg
gtgaggttaaagtataaatacaaagcaaggatcttcctggaggagagcctgtcgttcgga
gtccttggggagcatgggcgaggagtcaccgagcactatgggatcagtattgacgacatc
gaccttatcagtgctaacatggagaatgcgctcgcttctgttgggggcttctgctgtggc
cgctctttcgtggttgaccatcagcggctctctggccaaggatactgcttttcagcttca
ctgccccccctgctagccgctgccgccattgaggccctcaacatcatggaggagaaccca
gggatttttgcagttttaaagaaaaagtgccagaccatccacaagtccctacaaggggtt
tccggtttaaaagtggtgggggagtccctttgcccagcgcttcacctccagctggaagag
agcacgggctctcgggagagagatatgaagctgcttcaggagattgtagagcaatgcatg
aataagggcatcgcattgactcaggcacgctacttggacaaggaagagaagtgccttcct
cctccaagcatcagggttgtggtcaccgtggagcagacagacgaagagctgcagagggct
gcagccaccatcagggaggcggcccaggctgtgcttttgtag
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