Rattus norvegicus (rat): 361736 Help Entry 361736            CDS       T01003                                  Symbol Patl1 Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism rno  Rattus norvegicus (rat) Pathway rno03018   RNA degradation Brite KEGG Orthology (KO) [BR:rno00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     361736 (Patl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rno03019]     361736 (Patl1) Messenger RNA biogenesis [BR:rno03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      361736 (Patl1)   mRNA degradation factors    5'-3' decay     Decapping complex      361736 (Patl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  361736 NCBI-ProteinID:  NP_001101990 RGD:  1305514 Ensembl:  ENSRNOG00000021052 UniProt:  B5DF93 LinkDB All DBs Position 1:218255801..218287662 Genome browser AA seq 770 aa AA seqDB search MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL PVAADEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAVMRAVQTRPVLQPQPGS LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL LQGRVGQMLPPAPGFRAFFSAPPPATPPPQQHPPGPGPHLQNLRPQAPMFRPDTTHLHPQ HRRLLHQRQLQSRNQHRNLNGTGDRGGHRVSHQDHLRKDPYANLMLQREKDWVSKIQMMQ LQSTDPYLDDFYYQNYFEKLEKSSAAEEMQGDGPKKERTKLITPQVARLEHAYKPVQFEG SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE RRYLLSLEEERPALTDERKHKIWSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI LPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM NLPQSATAPAPSNSHLTAVLQNKFGLSLLLILLSRGEDLHSSDPTVESTQNNQWTEVMFM ATQELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGMR NT seq 2313 nt NT seq  +upstreamnt  +downstreamnt atgttccgctacgagtctttggaggattgtcctctagatgaagatgaagatgcatttcag ggcctgggagaagaagatgaagaaattgatcaatttaatgatgatacatttggatcaggt gcagttgatgacgattggcaggaagcacatgagcgcctggctgagttggaagagaagtta cctgtggcagctgatgaacaaacaggcaatggagagagagatgagatggacttgttgggt gaccatgaggagaatctagcagaaaggctcagcaagatggtgattgaaaatgagctagaa gatccagctgtcatgagggcagtgcagaccaggccagttttacaacctcaaccaggaagt ctgaattccagcatctgggatggatctgaagttctgaggcgaatccgtggaccactgctt gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag ggcccagaagatgaccgggacctttctgagcgagctttaccaaggcggtcaacatcacct atcattggaagtcctcctgttagagctgttcctataggcaccccacctaagcagatggcg gttcccagcttcaaccaacagattctgtgtccgaagcctgttcatgtccggcccccaatg ccaccacgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc ccgaactcctccctcctgggccacccttttcctcctagtgttcctcctgtactcagtcct ctgcagagagcacagcttctgggaggagcacaactacagcctggacgaatgtctcccagc cagttcgcacgggtccctggatttgttggtagcccattggctgccatgaatcctaagttg ctacaagggcgtgttgggcagatgcttcctccagcaccaggcttccgtgccttcttcagt gctccaccccctgccacgccacctccacagcaacaccctcctggcccaggacctcacctc cagaacctaagacctcaggccccaatgtttagaccagacacaactcaccttcatccacag caccggcgcctgctgcaccagaggcagctgcaaagtagaaatcagcatcgaaatctcaat ggtactggagacagaggaggtcaccgggttagtcatcaagatcatctccggaaggatcca tatgctaatctaatgttgcagcgggaaaaggattgggtctctaaaatccaaatgatgcag ctgcagagcactgatccctacctggatgatttctattaccagaattactttgaaaagctg gagaaatcgtcagctgctgaagaaatgcaaggtgacggccctaagaaggagcgcaccaag ctcatcacccctcaggtggccagactggagcacgcctacaagcctgtgcagtttgagggc tctttggggaaacttactgtctctagtgtgaataatcctcggaagatgatagatgctgtt gtgacatctcggagtgaggatgatgaaacaaaagaaaaacaagttcgggataaaagaaga aaaacccttgtcataattgagaaaacctatagtttactccttgatgtggaggattatgaa aggcgctatctcctaagtctagaggaagagcggcctgccctgacagatgaaagaaagcac aaaatctggagcatgtatgacaacctgagaggcaaattgcctgggcaagagaggccaagt gatgaccactttgtacaaatcatgtgtatccgaaaagggaagagaatggttgcccgcatt ctccctttcctctccacagagcaagcagctgacattctcatggcaactgccaggaacctc cctttccttatcaagaaggacgcacaagatgaggtgctgccatgcttactgagtcccttc tctctcctcctctatcatcttccttcagtgactgtcaccagccttctgcaacagctaatg aacctacctcaaagtgcaactgcaccagcaccctctaactctcacctcactgctgtgctc cagaacaagtttggcttgtcactgctcctaatcctcttaagccgtggggaagacctacat agttcagatcctactgtagaatcaacgcaaaataaccagtggacagaggtgatgttcatg gcaacccaagaacttctacggatcccccaagcagccctggccaagccaatctctataccc acaaatctagtgtctctcttttctcgctatgttgaccggcagaaactgaacttgctggag acaaaactgcagctggttcaggggatgcgataa

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