Rattus norvegicus (rat): 361739
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Entry
361739 CDS
T01003
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
361739 (Tmc1)
03037 Cilium and associated proteins [BR:
rno03037
]
361739 (Tmc1)
Transporters [BR:
rno02000
]
Other transporters
Pores ion channels [TC:
1
]
361739 (Tmc1)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Stereociliary proteins
361739 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
361739
NCBI-ProteinID:
NP_001402920
RGD:
1308682
Ensembl:
ENSRNOG00000051262
LinkDB
All DBs
Position
1:complement(227701781..227872534)
Genome browser
AA seq
753 aa
AA seq
DB search
MLQIQVEGKEDDTDASSKEEEDKLPRRESLRPKRKRTRDVINEDDPEPEPEDEETRKARE
KERRRRLRRGAEEEEEIDEEELERLKALLDENRQMIATVKCKPWKMEKKIEVLKEAKKFV
SENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVAS
YFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFN
GLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGD
DNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENIHLIRFLRFL
ANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLF
AELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMI
KAYNESLSGNTTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRA
CFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHT
SMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPF
SGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLTIYYLNATAKGQKAAN
LDLKKKMKQQALENKMRNKKMAAARAAAAAGGQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaatccaagtggaggggaaagaagatgatacagatgcaagctcaaaggaagag
gaagacaaactacctagaagagagagcttgagaccaaagaggaaacggaccagagacgtc
atcaatgaggatgatccagaaccagagccagaggatgaagaaacaagaaaggcgagagaa
aaagaaaggcggaggaggctgaggagaggagcggaagaagaagaagaaattgatgaagag
gaattagaacgattaaaagcactgctagatgagaacagacaaatgatcgctactgtcaaa
tgtaaaccttggaaaatggagaagaaaattgaagttctcaaggaagcaaagaaatttgtg
agtgaaaatgaaggagctcttgggaaaggaaaaggaaagaagtggtttgcatttaagatg
atgatggccaagaaatgggcaaaattcctccgtgattttgagaacttcaaagctgcttgt
gtcccatgggaaaacaagatcaaggcaattgaaagtcagtttggttcctcagtggcctca
tacttcctgttcctgaggtggatgtatggcgtcaacatggttctctttatattgaccttc
agcctcatcatgttaccagagtacctctggggtttaccatatggcagcttacctaggaaa
acagtcccaagagctgaagaggcatctgcagcaaactttggtgtgctgtacgacttcaac
ggcctggcacagtactctgtcctcttttatggctattacgacaataaacgcacaatcgga
tggctgaatttccggctacctctttcctacttcctggtggggattatgtgcattggatac
agctttctggttgtcctcaaagcgatgaccaaaaacatcggtgatgatggaggtggcgat
gacaacactttcaacttcagctggaaggtgttctgtagctgggactatctgattggtaac
cctgaaacagctgacaacaaattcaattctatcacgatgaactttaaggaagccatcatt
gaagagagagcagcccaggtggaggagaacatccacctcatcagattcctgaggtttctt
gctaacttcttcgtgttcctaacacttggtgcaagtggatacctcatcttttgggctgtg
aagcgatcccaggaatttgcccagcaagatcctgacacccttgggtggtgggaaaagaat
gaaatgaacatggttatgtccctcctggggatgttctgtcctacgctgtttgacttattt
gctgaactggaagattaccatcctctcatcgctctgaagtggctcctgggacgcattttt
gctcttcttctaggcaacttgtatgtattcattctcgccttgatggatgagattaacaac
aagattgaagaggagaagcttgtgaaggccaatattaccctgtgggaagccaacatgatt
aaggcttacaatgaatctctctctgggaacacgacagggccaccctttttcgttcatcct
gcagatgtaccccgaggtccctgctgggaaacaatggtggggcaggaattcgtgcgtctc
acagtttctgatgtcctgaccacttatgtcacgatcctcattggtgacttcctcagagca
tgcttcgtgaggttctgcaactactgctggtgctgggatttagaatatggctatccttca
tatacagaattcgacatcagtggcaacgtcctcgctctgatcttcaaccaaggcatgatc
tggatgggctccttctttgctcctagcctcccaggcatcaacatcctccgactccacaca
tccatgtatttccagtgttgggctgtgatgtgctgcaatgttcccgaggccagggtcttc
aaagcttccagatccaacaacttctaccttgggatgctgctcctcatcctcttcctgtcc
accatgcccgttctgtacatgattgtctccctcccaccgtcttttgattgtgggcctttc
agtggtaaaaacagaatgtttgaagtcattggtgagaccctggaacacgatttcccaagc
tggatggcgaagatcctgaggcagctttctaaccccggccttgtcattgctgtcattctg
gtgatggttctgaccatctactatctcaatgctactgccaagggacagaaagcagcaaac
ctggatctcaaaaagaagatgaaacagcaagctttggagaacaaaatgcgaaacaagaag
atggcggccgctcgagcagctgcagctgctggtggccagtaa
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