Rattus norvegicus (rat): 361745
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Entry
361745 CDS
T01003
Symbol
Smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno04714
Thermogenesis
rno05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
361745 (Smarca2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
361745 (Smarca2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
361745 (Smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
361745 (Smarca2)
03036 Chromosome and associated proteins [BR:
rno03036
]
361745 (Smarca2)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
361745 (Smarca2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
361745 (Smarca2)
Chromatin remodeling factors
BAF complex
361745 (Smarca2)
PBAF complex
361745 (Smarca2)
GBAF(ncBAF) complex
361745 (Smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
361745
NCBI-ProteinID:
NP_001004446
RGD:
1302988
Ensembl:
ENSRNOG00000011931
UniProt:
Q6DUH4
E9PTG1
LinkDB
All DBs
Position
1:233617277..233784908
Genome browser
AA seq
1597 aa
AA seq
DB search
MATPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEGLHQLHKPMDGIHDKGIVEGVHCGSMKGTSMRPPHPGVGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGTLIPGDLQAMNQPDRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQQQQQQQQQQQQQQQPQQPQQP
QQQTQAQPQQQQQQQQQPPTLVSYNRPSGPGQELLMTAQNTQRKLSAPAPSGRPSPAPPA
ATQPTATAVPGPSVQEPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQAR
IAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSK
AYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKI
QKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQT
DEYVANLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAEGGEPALGPDGEPIDESSQMSDL
PVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSR
QETEEKILLDPNSKEVSEKDARQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVE
KQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLN
GPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKGTPAMRRSLVPQLRSGKFNALLTTYEYI
IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWA
LLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKE
VESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLR
KICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFC
QMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGL
NLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN
VDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLF
MRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRD
VDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPA
EKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSR
KELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSI
VLQSVFKSARQKIAKEEESEEESNEEEEEEDEEESEAEAKSVKVKIKLNKKEEKGRDTGK
GKKRPNRGKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggccacacccacagacccagctgcaatgccccatcctgggccctccccggggcctgga
ccttctcctggaccaattctggggcctagtccaggaccaggaccgtccccaggttctgtg
cacagtatgatggggcccagtcctggacctcccagtgtctcacatcctatgtcgacaatg
ggctcggcagacttcccacaggaaggcttgcaccagctgcataagcccatggatgggata
catgacaaggggattgtagaaggtgtccactgtggatccatgaagggtaccagtatgcgc
ccaccacacccaggagtgggccctccacagagcccaatggatcagcacagtcaaggttat
atgtcaccacatccatctcctttgggagccccagagcatgtctccagccctatatctgga
ggaggcccaaccccaccccagatgccgccgagccagccagggacactcatcccaggagat
ctgcaggccatgaaccagcctgacagaggtccctcgcctttcagtcctgtacagctgcat
cagcttcgagctcagattttagcttacaaaatgttggccaggggccagcccctccctgaa
actctgcagcttgcagtccagggaaaaaggaccttgcctggtatacaacagcaacagcag
cagcagcagcaacaacaacagcagcagcaacaacagcagccccagcagccccagcagcct
cagcagcagacacaggcacagccacagcagcagcaacagcagcagcagcagccgccaact
cttgttagctacaatagaccatctggccctgggcaggagctgctgatgactgctcagaac
acccagcggaagctgtcggcacccgcacccagcggccgaccttcacctgcacctccagcg
gctacccagcccacggccacagcagtgcctgggccctcggtgcaggagcctgccccaggg
cagccatctcccgtcctgcagctgcaacagaagcagagccgcatcagccccatccagaaa
ccgcaaggcctggaccccgtggagatcctgcaggaacgggagtacagacttcaggctcgc
atagctcataggatacaagaactggaaagtctgcctggctccttgccaccagatttacga
accaaagcaaccgtagagctgaaagcacttcgcttgctcaactttcaacgtcagctgaga
caggaggtggtggcctgcatgcgaagggacaccaccctggagacagccctcaactccaag
gcgtacaagcggagtaagcgccaaacccttcgagaggcacgcatgacggagaaactggag
aagcagcagaagatagagcaggagaggaaacgccgccagaagcaccaggaatacctgaac
agtattttgcaacatgcaaaagattttaaggaataccaccggtctgtggctgggaagatc
cagaagctgtccaaagcagtggcgacttggcatgctaacaccgaaagggagcagaagaag
gagacggagcggatcgagaaggagagaatgcgaaggctgatggctgaagatgaagagggc
tacaggaagctcatcgaccaaaagaaagacagacgcctggcctacctattgcagcagact
gatgagtatgtcgccaatctgaccaacctggtttgggagcacaagcaggcccaagcagcc
aaagagaagaagaagaggaggaggaggaggaagaaggccgaagagaatgcagagggaggg
gagcctgccctgggaccagatggagagccaatagacgaaagcagccagatgagcgacctg
cctgtcaaagtgacgcacacggaaactggcaaggtcctctttggaccagaagcacccaaa
gcaagtcagctggacgcctggctggagatgaatcctggttacgaagtggcacccagatcg
gacagtgaagagagtgaatcagactatgaggaagaggatgaagaagaagagtccagtagg
caggaaacagaggagaagatactgctggatccaaacagcaaagaagtttccgaaaaggac
gccaggcagatcattgagactgcgaaacaggatgtggacgacgagtacagcatgcagtac
agtgccagagggtcccagtcctactacacggtggctcacgccatctccgagagggtggag
aagcagtctgccctcctcattaatggcaccctgaagcactaccagctacagggcctggaa
tggatggtttccctgtataataacaatctgaatggaatcttagctgatgaaatggggcca
ggcaagaccatccagaccattgcactcatcacgtatctgatggagcacaaagggctcaat
ggcccctacctcatcatcgtccccctctcgactctgtctaactggacatatgaatttgac
aaatgggctccttctgcggtgaaaatttcctacaagggtacccctgccatgcgacgctcc
cttgttccccagttacggagtggcaaattcaatgccctcctgactacctacgagtacatt
ataaaagacaagcacattcttgcaaagattaggtggaaatacatgatagtggacgaaggt
caccgaatgaagaaccatcactgcaagctgacccaggtcctgaacacacactacgtggcc
cccagaaggatccttctgactgggaccccgctgcagaataagctccccgaactctgggcc
ctcctcaacttcctcctccctacaatcttcaagagttgcagcacatttgagcagtggttt
aatgctccgtttgccatgaccggcgaaagggtggacctgaacgaagaagaaaccattttg
atcatcaggcgtctacacaaggtgttgagaccctttttactgaggaggctgaagaaagag
gttgagtctcagcttccagaaaaggttgagtatgtgatcaagtgtgatatgtccgctctg
cagaagatcctgtaccgtcatatgcaggccaagggcatcctcctcacggacgggtctgag
aaggataagaaggggaaaggaggtgccaagacgcttatgaacactatcatgcagctgcga
aagatatgcaaccacccatatatgtttcagcacattgaggaatcctttgctgaacacctg
ggctattcgaatggggtcatcaatggggccgagctgtatcgggcctcaggaaagtttgag
ctacttgatcgtattctgcccaaattgagagcgactaaccaccgcgtgctgcttttctgc
cagatgacgtcactcatgaccatcatggaggattactttgcttttcggaacttcctttac
ctgcgccttgatggcaccaccaagtctgaagatcgtgctgctttgctgaagaaattcaat
gaacctgggtcccagtatttcattttcttgctgagcacacgagctgggggcctgggctta
aatcttcaggccgcagacactgtggtcatctttgacagcgactggaatcctcatcaggat
ctgcaggcccaagaccgagctcaccgcattggccaacaaaatgaggtccgggtgctgagg
ctttgcaccgtcaacagtgttgaggaaaagattctcgcggctgccaagtacaagctgaat
gtggaccagaaggttattcaggcgggcatgtttgaccagaagtcatccagccatgagcgg
agggcattcctacaggccatcctggagcacgaagaggagaatgaggaagaagatgaggta
ccagacgacgagaccctgaaccagatgattgctcgccgggaagaagagtttgatcttttt
atgcgcatggacatggaccggcggagagaggacgccagaaacccgaagcgcaagcctcgc
ttgatggaggaagatgagctgccctcctggataattaaggatgatgctgaagtggaaagg
ctcacctgcgaagaggaggaggagaagatatttgggaggggctctcgacagcgccgggat
gtggactacagcgatgccctcaccgagaagcagtggctcagggccatcgaagacggaaat
ttggaagaaatggaagaggaggtacggctgaagaagaggaaaagacgaagaaacgtggat
aaagatcccgtgaaggaagatgtggaaaaagcaaagaaaagaagaggccgccccccagct
gagaagttgtcaccaaatccccccaaactgacgaagcagatgaacgccatcattgatact
gtgataaactacaaggacaggtgtaacgtggagaaggtgccctgtaattctcagttggaa
atagaaggaaacagttcagggcgacagctcagtgaagtcttcattcagttaccttccaga
aaagagttaccagaatactatgaattaattaggaagccagtggatttcaaaaagataaag
gaaagaatccgtaatcataagtaccgaagcctgggagacctggagaaagatgtcatgctt
ctctgtcacaatgcacagacattcaacttggaaggatcccagatctacgaagactccatt
gtcctccagtcagtgtttaagagtgctcggcagaaaattgccaaagaagaagagagtgag
gaggaaagcaatgaggaggaggaggaagaggatgaagaggagtcagaggcagaggcaaaa
tctgtgaaggtgaaaatcaaactgaataaaaaggaagagaaaggccgggatacagggaag
ggcaagaaaaggccaaaccgaggcaaagccaaacctgttgtgagcgattttgacagcgat
gaggagcaggatgagaacgaacagtcagaagcaagtgggactgacgacgagtga
DBGET
integrated database retrieval system