Rattus norvegicus (rat): 361775
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Entry
361775 CDS
T01003
Symbol
Trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
361775 (Trub1)
Enzymes [BR:
rno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
361775 (Trub1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
361775 (Trub1)
Prokaryotic type
361775 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
361775
NCBI-ProteinID:
NP_001012173
RGD:
1308502
Ensembl:
ENSRNOG00000017321
UniProt:
Q5M934
A6JI44
LinkDB
All DBs
Position
1:266518510..266559633
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AA seq
341 aa
AA seq
DB search
MAAEEAEVVSPLIVDTAPDTSGTAAASLAAAVSAAAAAARTGSQAQVSKAALAAKLMSLS
GVFAVHKPKGPTSAELLNRLKEKLLAEAGLPSPEWNKRQKQTLKVGHGGTLDSAAQGVLV
VGIGRGTKMLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQKF
TGNIMQVPPLYSALKKDGQRLSTLMKRGETVEARPARPVTVHSISLLKYQPPFFTLDVEC
GGGFYIRSLVSDIGKELSSCATVLELTRTKQGPFTLAQHALPEDRWTINDIAQSLKRCTS
LLPEELTFKKSKSEPSSDQALSCGYITLRETKREDDTVKTL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaggaggccgaggtggtttcacctctgattgtggacacagccccagacact
tcaggaacagccgcggcctcactagccgcagcggtgtctgctgctgcggcagcggctagg
actggatcgcaagcccaggtttccaaggccgctctggctgctaagctcatgtcgctcagc
ggcgtgttcgccgtgcacaagcccaaagggcccacttcagccgagctgctgaaccggctg
aaggagaagctgctggcagaagctggattgccatctccagaatggaacaagaggcaaaag
cagacattgaaagttggacacggagggacactggacagcgcagcgcaaggtgttctggtg
gttgggattggaagaggaacaaaaatgttgaccagtatgttgtcggggtccaagaggtat
atcgccactggagaactggggaaagccacggacacactggattctaccgggaaggtaaca
gaggagaagccatatgataaaataacacaagaagatatcgaaggcattctgcagaagttt
actgggaatataatgcaagtaccccccctctattctgcactgaagaaggatggacagaga
ctctcaacgttaatgaagagaggcgagactgttgaggccaggccagccaggccagtgact
gttcacagcatctccctcctgaagtaccagccaccgttcttcacgctagatgttgaatgt
ggaggaggcttttacatccgaagcttggtcagtgacattggcaaagaactctcttcctgt
gccaccgtgctggagctgacccgcaccaaacaggggccctttacactggcacagcatgcg
ctccccgaagacagatggaccatcaatgacatcgcacagtccctcaagcgctgcacgtcc
cttctgccagaggagctgacgtttaaaaaatccaaatccgagccgtccagtgaccaggcc
ttaagctgtgggtacataactctaagggagacaaagagagaagacgacacagttaagacg
ctttga
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integrated database retrieval system
