Rattus norvegicus (rat): 362164
Help
Entry
362164 CDS
T01003
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04136
Autophagy - other
rno04140
Autophagy - animal
rno04211
Longevity regulating pathway
rno05010
Alzheimer disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
362164 (Atg13)
04136 Autophagy - other
362164 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
362164 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
362164 (Atg13)
05014 Amyotrophic lateral sclerosis
362164 (Atg13)
05016 Huntington disease
362164 (Atg13)
05017 Spinocerebellar ataxia
362164 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
362164 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
362164 (Atg13)
03029 Mitochondrial biogenesis [BR:
rno03029
]
362164 (Atg13)
Membrane trafficking [BR:
rno04131
]
Autophagy
Autophagosome formation proteins
ULK complex
362164 (Atg13)
Atg1 complex
362164 (Atg13)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
362164 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
362164
NCBI-ProteinID:
NP_001258141
RGD:
1310685
Ensembl:
ENSRNOG00000016984
UniProt:
A6HNE1
D3ZA45
LinkDB
All DBs
Position
3:complement(98102831..98136741)
Genome browser
AA seq
479 aa
AA seq
DB search
METDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTLTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAEDAGVA
YPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPNHPAHGAQADQERLVVHMPSDGTH
CAATPSSSEDTETVSNSSEGRASPHDILETIFVRKVGAFVNKPINQVTLTSLDIPFAMFA
PKNLELEDADPMVNPPDSPETTSPLHGSLHSEGSSGGSSGNAHDDFVMIDFKPAFSKDDI
LPMDLGTFYREFQNPPQLSSLSIDFGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcagttcccaggacagaaaggacctggacaagtttattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggagaaaagatttgcacccgt
tcatcatcttccccgacgggttcagattggttcaatttagcaatcaaagatatcccagaa
gtcacccatgaagcaaagaaggccctgtctgggcagctgcctgctgtggggcgatctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagttggaaatttggtgt
cttgaaatgaatgaaaagtgtgacaaagaaatcaaagtttcctacactgtatacaaccga
ttgtcactgctgctgaagtctctccttgctattacgagggtgacaccagcctatagactc
tccaggaagcaagggcatgaatatgtaattttgtacaggatttattttggagaagttcaa
ctgaatggcttaggagaaggcttccagacagttcgtgttggaacagtgggcacccccgtg
ggtaccctcactctttcctgtgcttatagaattaacttggcgttcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgttgaccgtccctat
cccagctcctctcctatgcacccttgcaattacagaactgctgaggatgctggagtcgca
tacccatcagtggaagactctcaggaagtgtgtaccacatctttttccacatcccctccc
tcccagctgatggttcctgggaaggaaggtggggtgcctcttgctcccaaccaccctgct
catggtgcccaggctgatcaggagagactggtggtgcacatgccttctgatggaacccac
tgtgcagccacaccctccagcagtgaggacactgagactgtatctaacagcagtgaagga
cgggcctcaccccatgacatcctggaaactatctttgtccgaaaagtgggagcatttgtc
aacaaacccatcaatcaggtgacactgacgagtttggacataccctttgccatgtttgct
cccaagaatttggagctggaggatgctgatcctatggtgaaccctccagactccccagag
accacgtctcccctccatggcagtctgcactcagagggctccagcgggggcagcagtggc
aatgcacatgatgactttgtcatgattgactttaaaccagctttttctaaagacgacatt
cttccaatggacttggggaccttttaccgtgaatttcagaatccccctcagctgagcagc
ctctccatagattttggagctcagtctatggcagaagacttggactccttaccagagaag
ctggctgtgcatgagaagaatgtccgagaatttgatgccttcgtcgaaaccctgcagtaa
DBGET
integrated database retrieval system
