Rattus norvegicus (rat): 362173
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Entry
362173 CDS
T01003
Symbol
Caprin1
Name
(RefSeq) caprin-1
KO
K18743
caprin-1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
362173 (Caprin1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
362173 (Caprin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
362173
NCBI-ProteinID:
NP_001012185
RGD:
1305707
Ensembl:
ENSRNOG00000009152
UniProt:
Q5M9G3
LinkDB
All DBs
Position
3:complement(110606489..110685408)
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AA seq
707 aa
AA seq
DB search
MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAAAPASQHPATGTGAVQTEAMKQILGVID
KKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQD
IQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEE
LSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKALKEIVERVFQ
SNYFDSTHNHQNGLCEEEEAASAPIVEDQVAEAEPEPTEEYTEQSEVESTEYVNRQFMAE
TQFSSGEKEQVDEWAVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQSDPLVRRQRVQDL
MAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPQVHSESRLAQSNQ
VPVQPEATQVPLVSSTSEGYTASQPLYQPSHAAEQRPQKEPIDQIQATISLNTEQTTASS
SLPAASQPQVFQAGASKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQSQYQ
ASYNQSFSSQPHQVEQTELQQDQLQTVVGTYHGSQDQPHQVPGNHQQPPQQSTGFPRSSQ
PYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRSSFSNTPNSGYTQSQFNAPRDY
SGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacagcggaagcggcagcaaatcgtcgggaccgccgccgccg
tccggttcctccgggagtgaggcggcggccggggcagctgcgccggcttctcagcatccg
gcaaccggcaccggcgcggtccagaccgaggccatgaagcagattctcggcgtgatcgac
aagaaacttcggaaccttgagaagaaaaagggtaaacttgatgattaccaggaacgaatg
aataaaggggaaaggctcaatcaagaccagctggatgccgtatctaagtaccaggaagtc
acaaataatttggagtttgcaaaggaattacagagaagtttcatggcattaagtcaggat
attcagaaaacaataaagaagacagcacgtcgggagcagcttatgagagaagaagcagaa
cagaagcgcttaaaaactgtacttgagttacagtatgtattggataagctgggagatgat
gatgtgagaacggatctgaagcaggggctgagtggagtgccaatattgtctgaagaggag
ttgtcattgttggatgaattctacaagctagtagatcccgagcgggacatgagtttaagg
ttaaatgagcagtatgaacatgcctccattcacttgtgggatttgctggaagggaaagaa
aagcctgtatgtggaacaacctataaagctctaaaggaaattgtcgagcgtgtttttcag
tcaaactactttgacagcactcataatcatcaaaatggattgtgtgaggaggaagaggca
gcttcagcacctatagtggaagaccaggtagctgaagctgaacctgaaccaacggaagaa
tacacagagcaaagtgaggttgagtcaacagagtatgtcaataggcagttcatggcggaa
acacagttcagcagtggtgagaaggagcaagtggatgagtgggcagttgaaacagttgag
gtggtaaactcactccagcagcaacctcaggctgcatctccttcagtaccagagccccac
tctctgactccagtggctcagtcagatccacttgtgagaagacagcgagtacaagatctt
atggcacaaatgcaagggccctataatttcatacaggattcaatgttggattttgaaaat
cagacgcttgatcctgccattgtatcagcacaacctatgaaccctacccaaaacatggat
atgcctcagctggtttgccctcaggttcattctgaatctagacttgcccaatctaatcaa
gttcctgtacaaccagaagccacacaggttcctttggtctcatccacaagcgaggggtac
actgcgtctcagcccctgtaccagccgtctcatgctgcagagcagcggccacaaaaggag
cccattgatcagattcaggcaacaatatctttaaatacagagcagactacagcatcatca
tcccttcctgctgcttctcagcctcaagtgttccaggctggggcaagtaaacctttgcat
agcagtggaatcaatgtaaatgcagctccattccaatccatgcaaacggtgtttaatatg
aatgccccagttcctcctgttaatgaaccagaaactttaaaacaacagagtcagtaccag
gccagttataaccagagcttttccagtcagcctcaccaagtggaacaaacagagcttcaa
caagaccagctgcaaactgtggttggcacttaccatggatcccaggaccagcctcatcaa
gtgcctggtaaccaccagcagcccccccagcagagcaccggctttccacgtagcagtcag
ccttattacaacagtcgcggtgtatctcgaggagggtctcgtggtgccagaggtttgatg
aatggatacaggggccctgccaatggatttagaggaggatatgatggttaccgctcttca
ttctccaacactccaaacagtggctatacacagtctcagttcaatgctccccgggactac
tctggctaccagcgggatggatatcagcagaatttcaagcgaggctctgggcagagtgga
ccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatgccgcaa
atgaacactcagcaagtgaattaa
DBGET
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