Rattus norvegicus (rat): 362247
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Entry
362247 CDS
T01003
Symbol
Trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein
KO
K11796
Trpc4-associated protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
362247 (Trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
362247 (Trpc4ap)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
362247 (Trpc4ap)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
362247 (Trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Carm_PH
Motif
Other DBs
NCBI-GeneID:
362247
NCBI-ProteinID:
NP_001094218
RGD:
1309914
Ensembl:
ENSRNOG00000019152
UniProt:
A6KI52
F7FBB0
LinkDB
All DBs
Position
3:complement(164582146..164653123)
Genome browser
AA seq
797 aa
AA seq
DB search
MAAAPAAAGAGASRGRRSAATAAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
FLTERDKLSKWSGIPQLLLKLYATSHLHSDFVECQSILKEISPLLSMEAMAFVTEDRKFT
QEATYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVER
LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVANEDSEHSQASTVFPPLGT
SEESGLPHNSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
SYIEEPYMDIDRDFTEE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgcccgcagcggctggagctggggccagccgggggaggcggtcggccgct
accgcggcggcgtggggcggctggggaggtcggccgcgaccgggtaacatcctgctgcag
ctgcggcagggccagctcaccggccgaggcctggtccgagcggtgcagttcactgagacc
tttttgaccgagagggacaaattgtccaaatggagtggaattcctcagttgctccttaag
ctgtatgccaccagccatctgcacagtgacttcgttgagtgccaaagcattctcaaggag
atttctcctcttctctctatggaggctatggcgtttgtgactgaagacaggaaatttact
caagaagctacatatccaaatacatatatttttgacttatttggaggcgttgatcttctt
gtagaaattcttatgaggcctaccatctctatccggggacagaaactgaaaataagtgat
gagatgtcgaaggactgcttgagcatcctgtacaatacctgtgtctgtacggaaggagta
acaaagcgtttggcagaaaagaatgattttgtgatttttctgttcacactgatgacaagt
aagaagacgttcttacaaacagcaactctcattgaagacattttgggtgttaagaaggaa
atgattcggctagatgaagttcccaatctgagttccttagtatccaattttgatcagcag
cagcttgctaacttctgcaggatcctggctgtcaccatttcagagatggacacagggaat
gacgacaaacacacgcttcttgccaaaaacgctcagcagaagaagagcttgagtttgggg
ccttctgcagctgaaatcaaccaagctgctcttctcagcatccctggctttgtggaacgg
ctttgcaaactggcaactagaaaagtgtcagagtcaacgggcacagccagcttccttcag
gagctggaggagtggtacacgtggctggacaatgcgctggtgctggacgccctgatgcga
gtggccaatgaggattctgagcacagtcaagcctccactgtgttccctcctctaggcact
tcggaggagagcgggctgccgcataactcagccaggacgcagctgccgcagtcgatgaag
atcatgcatgagattatgtacaaactggaggtgctctatgtcctctgtgtgctgctcatg
gggcgtcagcgaaaccaggtccacaggatgattgctgagttcaagttgatcccaggactc
aacaatttgttcgacaaactgatttggaggaagcattcagcatctgctcttgtcctccat
ggtcacaaccagaactgtgactgtagcccggatatcaccttgaagatccagtttttgaga
cttctccagagtttcagtgaccaccatgagaacaagtacctgctgctcaacaaccaggag
ctaaatgaactcagtgccatctctctgaaagccaacatccctgaggtggaagccgtcctc
aacactgacaggagtctggtgtgtgacggcaagaggggcttactaactcggctgctgcag
gtcatgaagaaggagccagcagagtcttcattcaggttttggcaagcccgggctgtggaa
agttttctccgagggactacgtcctatgcagaccagatgttcctgctgaagcgaggcctt
ctggagcacatcttatactgcattgtggacagcgaatgcaagtcgagggatgtactccag
agctactttgacctcctgggagagctgatgaagttcaacgttgatgcattcaagagattc
aataaatatatcaacactgatgcaaagttccaggtgttcctgaaacagatcaacagctcg
ctagtggattctaacatgctggtgcgctgtgtcactctgtcgctggaccgatttgaaaac
caggtggacatgaaagtggccgaggtcctgtccgagtgccgcctgctcgcctacatatcc
caggtgcccacgcagatgtccttcctcttccgcctcatcaatatcatccatgtacagaca
ctaacccaggagaacgtcagctgcctcaacaccagcctggtgatcctgatgctagcccgt
cggaaagagcggttgcccctgtacctgcggctgctacagcggatggagcacagcaagaag
taccctggcttcctgctcaacaacttccacaacctgctgcgcttttggcagcagcattac
ctgcacaaggacaaggacagcacctgcctggagaatagctcctgcatcagcttctcatac
tggaaggagaccgtgtccatcttgttgaacccagaccgccagtcgccctccgccctggtc
agctacattgaagagccctacatggacatagacagagacttcactgaggagtga
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