Rattus norvegicus (rat): 362251
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Entry
362251 CDS
T01003
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
362251 (Rbm39)
Spliceosome [BR:
rno03041
]
Common components
Common spliceosomal components
General mRNP proteins
362251 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
362251
NCBI-ProteinID:
NP_001013225
RGD:
1310071
Ensembl:
ENSRNOG00000019848
UniProt:
Q5BJP4
LinkDB
All DBs
Position
3:complement(165123087..165156453)
Genome browser
AA seq
524 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCF
QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagccgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagtcgagagaggaaacgaagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagggatgcaaggacagttttctgcatgcagctg
gcagcaagaattcgaccaagagatttggaagaatttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaatcgcctatgtggag
tttgttgatgtcagttcagtgcctctagcaattggattaactggtcaacgagttttagga
gtgccaatcatagtccaggcatcacaggcagaaaaaaacagagctgctgcaatggcgaac
aatttacaaaagggaagtgctggacctatgaggctctatgtgggatcattacactttaac
ataactgaagatatgcttcggggaatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaaccggtcgatctaagggatatggattcattaccttttctgac
tcagaatgtgccaaaaaggctttggaacagcttaatggattcgagttagcagggagacca
atgaaagttggtcatgttactgaacgaactgatgcatctagcgctagttcatttttggac
agtgatgaattagaaaggactggaattgacttgggaacaacaggtcgtctccagttgatg
gcaagacttgcagagggtaccggtttgcagattccaccagcagcacaacaagctttacaa
atgagtggctctctggcatttggtgctgtggcagatttgcaaacacgactttcccaacag
actgaagcctcagctttagctgcagctgcgtctgttcaacctcttgcaacacagtgtttc
caactttctaacatgtttaatcctcaaacagaagaagaagttggatgggatacagagatt
aaagatgatgtcattgaagaatgtaataaacatggtggagtcattcatatttatgttgac
aaaaattcagctcagggcaatgtgtatgtgaagtgcccatcgattgctgcggctattgct
gctgtcaatgcgttgcatggcaggtggtttgctggtaaaatgataacagcagcgtatgta
cctcttccaacataccacaacctctttcctgattccatgacagcaacacaactactggtt
ccaagtagacgatga
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