Rattus norvegicus (rat): 362501
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Entry
362501 CDS
T01003
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
362501 (Topors)
03036 Chromosome and associated proteins [BR:
rno03036
]
362501 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
362501 (Topors)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
362501 (Topors)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
362501 (Topors)
UBL E3 ligases
362501 (Topors)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
362501 (Topors)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
362501 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
362501
NCBI-ProteinID:
NP_001102128
RGD:
1305270
Ensembl:
ENSRNOG00000006485
UniProt:
A0A8I6ANV8
A6IIQ9
LinkDB
All DBs
Position
5:complement(60184076..60195979)
Genome browser
AA seq
1042 aa
AA seq
DB search
MGSQPPPLGSPLSREEGEAPPLAPAEEGRRRSRRVRLRGSCRHRPSLLGRRELASSGPAV
PATASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRC
LHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTAPEVRRF
RYRTTMTRERNASLYSPSSTVSRRTSTPPDSGVLFEGLGISTRPRDVDIPQFMRHMALRG
PTATDERSLRKVQEQDIINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPPSSEEGSRSDSSVITISPDEAEAQELDVNVSTIRQAPWDDE
TPGPSYSNSEQVHVGVSSLLNSSDSSDEELVSGGAASQIQGVQANDDVNNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDASRASSPRSVL
GKDEQMGKSHCDSDTRINSKKEEKRSTSLSTPRDSSSTRGDRACSPYNHRHRKGGRSRSS
DSRSQSRSGHDQRNHRKHHGKKRLKNKRSRSRESSSKPRARKDKKRSRTRDSSWSRRSQT
LSLSSGSTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARRKNHSERKYYYYERHRSRSVSSNRSRTT
SAVPDRMRNEKPGGKRKYKTRHLEDTNEEAQPSRAFASRVKESHYQKPSKLDGGSKDESD
SFSDSRPSDRETKHKRRKRRARSLSVEIVYEGKATDTSKHHKKKKKKHKKKHRKHHGDNT
SRSPVVITIDSDSDGDAGVKASVECSQSSLPQPGQDEVSTPSSEAFETKDVVTIEDELAV
EDKECDVTALTNDLSTSQAVESSESPPVSVEQTLDVREDSTFASDVESQSSNASIPTEPS
RPLPSPRTSLSSVSPGRDCDMS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagccgccgccactggggtctccgctgtctcgcgaggagggtgaagcgccc
cctctggcgcctgccgaggaggggaggcgcagaagccgccgggtacgccttcgcggatcc
tgccgccaccgaccgagcctcctgggccggcgggagctggcttctagcggcccagcggtc
cctgccaccgcgtcctcggagataatggcctcagctgccaaggaatttaaaatggacaac
ttttcacctaaagctggcactagcaaactgcagcagacagtaccggccgatgcatctcct
gattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgctgc
ctacataagttctgtttccgctgtgtacaagagtggtcaaaaaacaaagccgagtgccca
ctgtgtaagcagccctttgattccattttccattctgtgagggctgaagatgacttcaag
gagtatgtgctaaggccttcctacaatggttcttttaccgcccctgaggttcgaagattc
cgctaccggacaactatgacgagagaacggaacgcctctctttactctcccagtagcact
gtcagtagaagaacaagcactccgccagacagtggagtgctgtttgaagggttaggcatc
tcaacaagacctagagatgttgacattcctcaatttatgagacacatggcattaaggggg
ccaactgctacagatgagaggtctttgcggaaagttcaagaacaagatattattaatttt
aggcgcactctttatcgtgctggtgttcgagttagaagtatcgaagacggtggccgctac
agggatatttcagctgagttcttccgtagaaatccagcttgccttcacagattagttcct
tggttaaaacgtgagcttaccgttctttttggagcccatggctcgttagtcaatattgtc
cagcacatcatcatgagtaatgtcactcgctatgatttggagagtcaggcatttgtgtcg
gacctaagaccatttttgcttaatcgaactgagcattttatacacgagtttatcagtttt
gctagatctcccttcaatatggcagcttttgaccagcatgctaattatgattgccctcct
tcatctgaagaaggcagccgttctgattcttcagttattacaatatcaccagatgaggct
gaagcccaagagctagatgtgaatgtatccaccatcaggcaggcaccatgggatgatgaa
actcctggaccgtcatattcaaattcagagcaagtgcatgttggcgtgtcttccctttta
aattcttcggacagttcagatgaagaacttgtttctggaggagccgcatctcagatacaa
ggagtacaggccaatgacgacgtaaacaatgacagcgattcatcatcagataattgtgtc
attgttgggtttgttaagccattagctgaacggaccccagaacttgttgaactgtcttct
gattctgaggagttgggctcttatgaaaaaatggaaacagtgaagacacaagaacaggag
cagtcttacagttcaggtgatagtgatgctagtcgagcttcatctccgcgttctgtcctt
ggaaaagatgagcagatgggtaaaagccattgtgattcggacacaagaataaactcaaag
aaagaagagaaacgatctacgtcattgtcaactcccagggacagctcatctacaagaggt
gacagggcatgttccccatataaccatcgacataggaagggaggaagatccaggagttca
gattcccgttcccaaagtagaagtggacatgatcagaggaatcacaggaagcatcatggg
aagaaaagattgaagaataagagatccagaagcagggagagtagtagcaaacctagagcg
agaaaggacaaaaagagatcaagaactagagatagcagctggtcaagaagaagccagacc
ctttctctaagtagtggaagcactagtagatcaaggtctcgtagcagtgatcatggcaag
cgaagatcacgaagcagaaatcgagatcgctattatttaagaaataattatggaagcaaa
tacaagtgggaatatacttactatagccgaaacaaggacagagatggttatgagtcgtca
tacaggaggaggactctttcaagagcccattattctagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgccaggaggaagaaccacagtgaaaggaaa
tactactactatgagaggcaccgatcgaggagcgtgtcgagtaataggtcgaggactacg
tcagctgtccctgaccggatgagaaatgagaagcctggagggaagcggaagtacaagacc
cgccatttggaagacactaatgaggaggcacaaccgtctcgtgcatttgcttccagagtg
aaggagagtcattaccaaaagccatcaaaattggacggaggttctaaagacgagagcgat
agcttttcagatagcagaccatcagacagagagacaaaacacaagaggaggaaaaggagg
gcacggagcctaagtgtagagatagtttatgaaggaaaagctacagacacaagcaaacac
cataagaagaagaagaagaaacataagaagaagcataggaaacaccatggagataacact
tcacggtccccggtggttataaccatcgacagtgacagcgacggggatgctggagtgaag
gcaagtgttgagtgtagccagagcagtcttcctcagcctggacaggatgaagtctccact
ccatcctcggaagcatttgaaactaaagatgtcgtcacgatagaggatgagcttgctgtc
gaggacaaggagtgcgatgttacggcacttactaatgacttgagtaccagccaagctgtg
gagagcagtgagtcaccgccagtctcagttgaacagactcttgacgtacgagaagatagc
accttcgcctctgatgtggagagccagtccagtaatgcgtctattcccaccgagccatca
agaccattgccatctccacggacctcattatcctcagtgtctcctggtagagactgtgac
atgtcctga
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